Corynebacterium jeddahense: CJEDD_04180
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Entry
CJEDD_04180 CDS
T08816
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cjh
Corynebacterium jeddahense
Brite
KEGG Orthology (KO) [BR:
cjh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjh03400
]
CJEDD_04180 (phrB)
Enzymes [BR:
cjh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CJEDD_04180 (phrB)
DNA repair and recombination proteins [BR:
cjh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CJEDD_04180 (phrB)
Prokaryotic type
CJEDD_04180 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WCZ38449
LinkDB
All DBs
Position
complement(866067..867440)
Genome browser
AA seq
457 aa
AA seq
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MPTTLVWFRDDLRLTDNPALTWAAERGDVVGVVVDETTSRPLGRAATWWRDHSIAELSER
VPLTRAAGDPREIIPKMASELGAEVVWNRRYHSTEIDAAVKDACGARSFPGFLLTEPWEM
RTGSGMPYRVFTPFYKAVQAHLAAHPPSVLPAPALEGQSRIDVPTYPAWADTLAEHNTPG
ELAALDRFHAFLDGLADGAHYSNNDLTPGATSGLSAHLRFGELSPGYVWAETVALAEAHP
AAAADAYAFLRQLVWRDFAWHRFYHLPDLHLHNVRSQFDAFDWAWSEHADPMAHPYAFAR
PEMDGTAEHLGQLAAWQRGETGIPLVDAGMRELWLTGTMHNRVRMVVGSWLTKNLGIHWR
HGEEWFWDTLVDADVASNPFNWQWVAGSGDDAAPYFRIFNPITQQEKFDPLGKYVTKWRP
AALLPGYPEPMVDVKESRKVALAAYEDIKGVSGPQVG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccaccctcgtctggttccgcgacgacctgcgtcttacggataacccggcactg
acctgggccgccgagcgcggcgacgtggtcggcgtggtggtggacgagaccacatcgagg
ccgctgggacgtgcggcaacgtggtggcgcgaccactccatcgcggaactcagcgaaagg
gtcccgcttacgcgcgcggcaggcgacccgcgggagattatcccgaagatggccagcgag
cttggtgcggaggtggtgtggaaccgccgttaccactccaccgagatcgacgcggcggtc
aaggacgcgtgcggcgcgcggtccttcccgggcttcctgctgacggagccgtgggagatg
cgcacgggctccggcatgccgtaccgcgtgttcaccccgttttataaggccgtgcaagca
cacctcgccgcccacccgccgtcggtgctgcccgcgccggcactcgaggggcaatcgcgt
atcgacgtccccacgtaccctgcctgggcagacacactcgcagaacacaacacccccggc
gaactggctgcgctcgaccgcttccacgcctttttggacgggttggcggacggcgcccac
tactccaacaacgacctgaccccgggcgcgacctccgggctgtcggcgcacctgcgtttc
ggcgagctctcccccggctacgtgtgggccgagacggtggcgctagctgaggcgcaccca
gccgcagcagcggatgcgtacgcgtttctgcgccagctggtttggcgcgacttcgcctgg
caccgcttctaccacctgccggatttacacctgcacaacgtgcgcagccagttcgacgcg
ttcgactgggcgtggagcgagcacgccgacccgatggcgcacccgtacgccttcgcgagg
cccgagatggacggcaccgcagagcacctcgggcaactcgccgcttggcagcgtggggag
accggcatccccctggtcgacgcgggcatgcgggagctgtggctcaccgggacgatgcac
aaccgggtgcgcatggtggtgggatcctggctgacgaagaacctgggcatccactggcgc
cacggcgaggaatggttctgggacacgctcgtggacgccgacgtcgcgtccaacccgttc
aactggcagtgggtcgcgggctccggcgacgacgccgcaccctacttccgcattttcaac
cccatcacgcagcaagaaaagttcgaccccttgggtaagtacgtgaccaagtggcggccg
gcagcgctgctccccggctacccggaacccatggtggacgtcaaggaatcccgcaaggtc
gcccttgccgcttacgaggacatcaagggcgtgtcgggaccgcaggtagggtga
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