Corynebacterium jeddahense: CJEDD_06010
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Entry
CJEDD_06010 CDS
T08816
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cjh
Corynebacterium jeddahense
Pathway
cjh03030
DNA replication
cjh03410
Base excision repair
cjh03420
Nucleotide excision repair
cjh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJEDD_06010 (polA)
03410 Base excision repair
CJEDD_06010 (polA)
03420 Nucleotide excision repair
CJEDD_06010 (polA)
03440 Homologous recombination
CJEDD_06010 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjh03032
]
CJEDD_06010 (polA)
03400 DNA repair and recombination proteins [BR:
cjh03400
]
CJEDD_06010 (polA)
Enzymes [BR:
cjh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJEDD_06010 (polA)
DNA replication proteins [BR:
cjh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CJEDD_06010 (polA)
DNA repair and recombination proteins [BR:
cjh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CJEDD_06010 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJEDD_06010 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WCZ38808
LinkDB
All DBs
Position
1240725..1243412
Genome browser
AA seq
895 aa
AA seq
DB search
MSGRPLDWLTVSETPENTKRLLLIDGHSMAFRAFYALPTENFSTTGGQHTNAVYGFLSMF
ANILAEERPTHAAVAFDVGRKTFRTEKFAEYKAQREAAPPEFKGQVPIIEDVLGDLGITT
LSKENFEADDIVATLTTQARAAGDFEIVLVSGDRDYIQLVDATTTLLYPTRGVSTMTRFT
PEEVERKYGLTPAQYPDFAALRGDPSDNLPSVPKVGEKTATKWIAQYGTLDGLIDHADEL
KGQAANNFRERIEQVRLNRELTQMVTDVELPVGPDDLELKPAEVSRVASRFDDLEFGVNL
RERVLAAVPTDGTAPAAEAVELEDITLDDAPLDAWLAQREGDGLAVYVTGNATPGEGDVV
ALAIVDKQRHGVSKLAADLSAAEDVALKRWLESDAPKFFHEAKAAYHMLRGRGIELRGIA
HDTAIAAYLLRPGQRTYALEDIYQRHLQRQLNPGSDQLSLLSETADLDAAAAVLELSAAL
AEELRAIDSYELYSDLELPLVTVLAEMEHTGIAVDIEVLEGLRKEFTLKVEQVEEEARQL
VDEPSLNLSSPKQLSAVLFDKLGLPKTKKTKTGYSTAAGEIEALAEKHPHPFLDQLLAHR
EHQKMKSTIEGLIKTVQPDGRIHTTFNQTVASTGRLSSAEPNLQNIPVRTEAGRKIRSAF
VVGEGYECLLTADYSQIEMRVMAHLSKDDGLIEAYRAGEDLHNFVGSRVFDVPIDQVTPE
LRRRVKAMSYGLVYGLSAYGLSNQLSISAGEAKDIMASYFERFGGVKRYLDEVVEQARRD
GYTSTVFGRRRYLPELNSDNRVARENAERAALNAPIQGTAADIIKVAMLRVDAALEGKRS
RVLLQVHDELVVEVAPGELEAVRAIVEREMDGAIELLVPLEVSAGTGANWDAAAH
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggggcggccgctagactggctgaccgtgagcgagacacccgagaacacgaagcga
ctgctgctgatcgacggccactcgatggccttccgcgccttttacgcgctgcccacggag
aacttctccaccacgggtgggcagcacacgaacgcggtgtacgggttcctctccatgttc
gccaacatcctcgccgaggagcggccgacgcacgctgcggtggccttcgacgtcggccgc
aagaccttccgcaccgagaagttcgccgagtacaaggcgcagcgcgaggcggcaccgccg
gagttcaaaggccaggtgccgatcatcgaggacgtgctcggcgacctcggcatcaccacc
ttgagcaaggagaacttcgaggcggacgacatcgtggccaccctgaccacgcaggcgcgg
gcggcgggcgactttgagatcgtgctcgtctcgggcgaccgcgactacatccagcttgtc
gacgccacgacgacgctgctgtacccgacccgcggcgtgtctaccatgacccgcttcacg
cccgaggaggtggagcgcaagtacggcctcaccccggcgcagtacccggacttcgccgcg
cttcgcggggacccgtccgacaacctgcccagcgtgcccaaggtgggggagaagaccgcg
acgaagtggattgcgcagtacggcacgctcgacgggctcatcgaccacgccgacgagctc
aagggccaggccgcgaacaacttccgcgagcgcatcgagcaggtccgcctcaaccgcgag
ctcacgcagatggtcaccgacgtcgagctgccggtcggcccggacgacctcgaactcaag
cccgccgaggtgagcagggtcgcctcccgcttcgacgacctcgagttcggcgtgaacctc
cgcgagcgcgtgctcgccgcggtgcccacagacggcaccgcgcccgccgccgaggcggtc
gagctcgaggacattacgcttgacgacgccccgttggacgcctggctggcccagcgagaa
ggcgacgggttggcggtctacgtcaccggcaacgccacgcccggggagggtgacgtggtg
gcgctggcgatcgtcgataagcaacggcacggcgtaagcaagctcgccgccgacctgagc
gccgccgaggacgtggcgctgaagcgctggctcgagtcggacgcgccgaagttcttccac
gaggcgaaggcggcgtaccacatgctgcgcgggcgcggcatcgagctacgcggtatcgcg
cacgacaccgcgatcgccgcgtacctgctgcggcccggccagcgcacgtacgcgctcgag
gacatctaccagcgccacctgcagcgccagctcaacccgggatcggaccagctcagcctg
ctcagcgagaccgccgacctcgacgcggcagcggcggtgctggagctgtcggcggcgctg
gcggaggagctgcgcgcgatcgactcctacgagctgtactcggacctcgagctgccgctc
gtaaccgtgctcgccgagatggagcacactggcatcgccgtcgacatcgaggtccttgag
ggcctgcgcaaggagttcacgctcaaggtcgagcaggtcgaggaggaggcgcgccagctt
gtcgacgagccttcgctcaacctctccagccccaagcagctgtccgcggtgctctttgac
aaactcgggctgccgaagacgaagaagacgaagaccggctactccaccgcggcgggcgag
atcgaggcgctcgcggagaagcacccgcacccgttcttggaccagctgctcgcgcaccgc
gagcaccagaagatgaagtccacgatcgaggggctgatcaagacggtgcaaccggacggg
cgcatccacaccacgtttaaccagacggtcgcctcgacggggcggctcagctccgcggag
ccgaatctgcaaaacatcccggtgcgcaccgaggccggccgcaagatccgctccgcgttc
gtcgtgggcgagggctacgagtgcctgctcaccgcggactactcccagatcgagatgcgc
gtcatggcgcacctgtccaaggacgacgggctcatcgaggcgtaccgggcgggggaggac
ctgcacaacttcgtcggttcgcgcgtgttcgacgtgcccatcgaccaggtcaccccggaa
ctgcgccgccgcgtcaaggcgatgtcgtacggcctggtctacggcctgtccgcgtacggg
ctgtcgaaccagctctccatctccgcgggcgaggcgaaggacatcatggccagctacttc
gagcgcttcggcggggtgaagcgttacctcgacgaggtggtcgagcaggcgcgccgcgat
ggctacacctccacggtgttcggccgccgccgctacctgccggagctcaacagtgacaac
cgcgtggcccgggagaacgccgagcgcgcggcgctcaacgcgccgatccagggcacggcc
gccgacatcatcaaggtcgccatgctgcgcgtcgacgccgcgctcgagggcaagcgctcg
cgcgtcctgctccaggtgcacgacgagctcgtggtcgaggtcgccccgggcgagctcgag
gcggtccgcgcgatcgtcgaacgcgaaatggacggtgcgatcgagctgctcgtcccgctc
gaggtctcggccggcaccggtgcgaactgggacgcggcggcgcactaa
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