Corynebacterium jeddahense: CJEDD_07295
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Entry
CJEDD_07295 CDS
T08816
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cjh
Corynebacterium jeddahense
Brite
KEGG Orthology (KO) [BR:
cjh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjh03016
]
CJEDD_07295 (rnd)
Enzymes [BR:
cjh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CJEDD_07295 (rnd)
Transfer RNA biogenesis [BR:
cjh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CJEDD_07295 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WCZ39052
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All DBs
Position
1510197..1511396
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AA seq
399 aa
AA seq
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MSARPEYQLVDTPAAFATAAGALAGGRGPLAVDTERASTYRYGDRAFLVQVRRRGAGTFL
IAPEGHRDAARDVFGEVLNGEEWIIHAAKEDLRSLAELGLHPGRLFDTELASRLAGFSRP
NLAAMVERFVGVELEKGHGHENWSTTPLPPAWREYAALDVEYLHDLAEALTEYLDASGKL
DFAFEEFEHLMRAAAESPAPKTWRDVKGVSTLRSKASLQVARELWRERDALGRDTDTSPS
RLLSNQAIVEIARAQPTAPSELTRLASRDRMRPRDAARWLSVVERALAADAATWPEIQAP
DPAAAPSKSSWERYHHESWQVLQASRASIAQLAEDIEMQPEVLLAPAVLREVIWQAPESG
PHWGTHAVARSLAEAGARPWQVDYTAPLIAAAHAAVRDA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcacggcccgagtatcagctcgttgacacgcccgcagccttcgccacggctgcg
ggcgcgctcgcgggcgggcgcgggccgttagccgtggacaccgagcgcgcctcgacctac
cgctacggcgaccgcgcgttcctcgtgcaggtacgccggcgcggcgccggcacgttcctc
atcgcacccgagggccaccgcgacgcggcccgcgacgtgttcggcgaggtgctcaacggc
gaggaatggatcatccacgccgccaaggaggacctgcgcagcctcgcggaactcggcctg
cacccgggccggctcttcgacaccgagctcgcctcgcgcctcgccgggttttcccggccc
aacctcgccgccatggtggagcgcttcgtcggcgtggaacttgagaaaggccacggccac
gagaactggtccactaccccgctgccgcccgcctggcgggagtacgccgcgctcgacgtg
gagtacctgcacgacctcgccgaggcgctcacggaatacctcgacgcgtcgggcaagctc
gacttcgcgttcgaggagttcgagcacctcatgcgcgccgcagccgagtcgccggcgccg
aagacgtggcgcgatgtgaagggcgtgtcaacgctgcgctcgaaggcaagcctgcaggtc
gcccgcgagctgtggcgcgagcgcgacgcactggggcgcgacaccgacacctcaccctcg
cggctgctgagcaaccaggcgatcgtggaaatcgcgcgcgcacagccaaccgcccccagc
gaattgacgcgcctcgcttcccgcgaccggatgcgcccgcgcgacgccgcgcgctggctc
agcgtggttgagcgtgccctcgccgcagacgctgcgacgtggcccgagatccaggcgcca
gacccggcggcggctccgtcgaagtcctcgtgggagcgctaccaccacgaatcctggcaa
gtgctccaggcgtcgcgtgcctcaattgcgcagctcgcggaagacatcgagatgcagccg
gaagtactccttgcgccggcggtgctccgcgaggtgatttggcaggcgcctgagtctggc
ccgcactggggcacgcatgcggttgcccgcagtctcgcagaagcgggggcgcggccctgg
caggtggactacacggcgccgctcatcgccgccgcgcacgctgcggtgcgcgacgcgtaa
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