KEGG   Corynebacterium jeddahense: CJEDD_07610
Entry
CJEDD_07610       CDS       T08816                                 
Name
(GenBank) Putative ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
cjh  Corynebacterium jeddahense
Pathway
cjh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cjh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CJEDD_07610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjh03019]
    CJEDD_07610
Messenger RNA biogenesis [BR:cjh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CJEDD_07610
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6 BLTP1_N
Other DBs
NCBI-ProteinID: WCZ39115
UniProt: A0ABY7UK59
LinkDB
Position
complement(1580743..1582926)
AA seq 727 aa
MNEPRNRARKVTRKAGPPEASDQQPVFQAPEAAPIERPGAGDGGDAGAGAGAGAGAGAAE
VRADNGGNDNGGRDNGGNDNGNGRDNGNDSGNGGGRSRRRGRGRGNGGRGNGNGGHGGEG
RGNGNGGHGRGGNGGGRRNPVKSMQGADLTKRLPAPAKLAKDTLRIYALGGISEIGRNMT
VFEYNGRLLIVDCGVLFPNSDEPGVDLVLPDFGPIENKLDKVDALVVTHGHEDHIGAIPW
LLKLRNDIPIYSSKFTNALIAAKTQEHRQRPKLHDVNKDSEVTVGPFRLRFWHVGHSIPE
CLGLSIKTGAGHVVMTGDIKVDQTPYDGKPTDIPALARYGDEGIDLFMCDSTNATIPGIS
ASEAGIEETLTRLVAGARQRVVIASFASNVSRVQMAVNAAVANNRKVAFNGRSMLRNMEI
AEKMNLLKAPKGTIIPIEEAAKMAPHKTVLITTGTQGEPMAALSRMSRREHRQITIHDGD
TIILSSSLIPGNEEAVFAVINNLAQIGANVITNSEAHVHASGHGYAGELLALYNAARPRN
AMPVHGEWRHMRANKELAISTGVKPSNTALAQNGVVVDMHKGQIKVAGQYQVGQLYVDGT
TMGDVDPDVLADRTSLASGGVVSITCVIDDRTGRLLEAPQVSTTGYSDDDRDFNKKVVEG
VEAVMGDLAAEGENDPFRMVQQIRRKVSRAIEQNYKRQPVILPTVVPMSSDNHAASDDEI
AATRESR
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgaacgaaccccgcaatcgcgcacgcaaggtgacgcgaaaggctggaccgccggaggcg
tccgaccagcagcccgtgttccaggcaccggaggcagcgccgatcgagcgcccgggcgcc
ggtgacggcggcgacgctggcgccggtgccggtgccggtgccggtgctggcgccgccgag
gtccgcgccgacaacggcggcaacgacaacggcggccgagacaacggcggcaacgacaac
ggcaacggccgcgacaacggcaacgacagcggcaacgggggtggccgcagccggcgccgc
ggtcgcggccggggcaacggtggccgcggtaacggcaacggcggccacggcggcgagggc
cgcggtaacggcaacggcggccacggccgcggcggcaacggcggcgggcgccgcaacccg
gtgaagtccatgcagggcgcggacctgacgaagcgcctgcccgccccggcgaagctggcc
aaggacacgctgcgcatctacgcgctcggcggcatctcggagatcggccgcaacatgacg
gtcttcgagtacaacgggcgcctgctcatcgtggactgtggcgtgctgttcccgaactcg
gacgagccgggcgtggacctcgtgctgccggacttcgggccgatcgagaacaagctggac
aaggtcgacgcgctcgtggtcacccacggccacgaggaccacatcggcgcgatcccgtgg
ctgctcaagctgcgcaacgacatcccgatctactcctcgaagttcaccaacgcgctcatc
gccgcgaagacgcaggagcaccgccagcgcccgaagctgcacgacgtgaacaaggactcc
gaggtcactgtcggcccgttccgcctgcgcttctggcacgtcggccactccatccccgag
tgcctcggcctctcgattaagacgggcgctggccacgtggtgatgaccggcgacatcaag
gtggaccagaccccgtacgacggcaagccgacggacatcccggccctggcccgctacggc
gacgagggcatcgacctgttcatgtgcgactccacgaacgccaccatcccgggcatctcc
gcctcagaggccggcatcgaggagacgctcacccggctagtcgcgggcgcgcgccagcgc
gtggtcatcgcgtcgtttgcctcgaatgtctcgcgcgtgcagatggcggtcaacgccgcc
gtggccaacaaccgcaaggtggcgttcaacggccgctccatgctgcgcaacatggagatc
gccgagaagatgaacctgctcaaggcgccgaagggcacgattatcccgatcgaggaggcc
gcgaagatggcgccgcacaagacggtgctcatcaccaccggcacccagggtgagccgatg
gcggcgctgtcgcgcatgtcgcgccgcgagcaccgccagatcaccatccacgacggcgac
acgatcatcctgtcgtcctcgctcatcccgggtaacgaggaggccgtcttcgccgtgatc
aacaacctcgcccagatcggcgcgaacgtgatcacgaactccgaggcgcacgtccacgcg
tccggccacggctacgcgggcgagctgctcgcgctctacaacgcggcgcgcccgcgcaac
gcgatgccggtgcacggcgagtggcgccacatgcgcgcgaacaaggagctcgcgatctcc
accggcgtgaagccgtcgaacaccgcgctcgcccagaacggcgtggtcgtggacatgcac
aagggccagatcaaggtcgcgggccagtaccaggtgggccagctctacgtcgacggcacg
accatgggcgatgtcgacccggacgtgctcgccgaccgcacctcgctcgcctccggcggt
gtcgtgtccatcacctgcgttatcgacgaccgcacgggccgcctgctcgaagccccgcag
gtgtccaccacgggttactccgacgacgaccgcgacttcaacaagaaggtcgtcgagggc
gtcgaggccgtcatgggcgacctcgccgccgagggcgagaacgacccgttccgcatggtg
cagcagatccgccgcaaggtctcgcgcgcgatcgagcagaactacaagcgccagccggtg
atcctcccgacggtggtgccgatgtcctcggacaaccacgccgcctccgacgacgagatc
gcggcgacgcgcgagtcgcgctag

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