Corynebacterium jeddahense: CJEDD_07635
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Entry
CJEDD_07635 CDS
T08816
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cjh
Corynebacterium jeddahense
Pathway
cjh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJEDD_07635 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjh03019
]
CJEDD_07635 (pnp)
03016 Transfer RNA biogenesis [BR:
cjh03016
]
CJEDD_07635 (pnp)
Enzymes [BR:
cjh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CJEDD_07635 (pnp)
Messenger RNA biogenesis [BR:
cjh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CJEDD_07635 (pnp)
Transfer RNA biogenesis [BR:
cjh03016
]
Prokaryotic type
tRNA degradation factors
CJEDD_07635 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
RNase_PH_C
OB_cyt-4
MnmE_helical
Mug135_C
Dpoe2NT
Motif
Other DBs
NCBI-ProteinID:
WCZ39120
UniProt:
A0ABY7UMN8
LinkDB
All DBs
Position
complement(1586054..1588375)
Genome browser
AA seq
773 aa
AA seq
DB search
MIADNLRRREILLSFTPNNSFDVNVDEDFGLTEAVATLDNGDFGTRTVRFETGQLARQAD
GSVTTYLDEETMLLATTTASNQPREGFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTQ
AILACRLIDRPLRPTFVKGLRNEVQVVITVLSQHPEEYYDVVAINGASAATQLSGLPVSG
PVGGVRMALLADDKHPEGQWVAFPNHEQHERCLFEMVVAGRMVERKRGRKTEEDVAIMMV
EAGAGVNVVKQVEAGYPAPTEATVAEGLEAAKPFIETLCRAQRALADEVAKDTKEFPLFP
AYSDKVFTAVEKKSAKKLAKLLTIKGKAERDDATNAYMEEIEEQLLDTFDIDDDDREAVA
AASKEIRAAYNAVMKQIVREKILSEGFRIDGRGLTDIRDLEVEVQLVPRAHGSALFERGE
TQILGVTTLDMLKMEQHIDSLTPEDSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALA
ERALLPVIPPREEFPYTIRQVSEALGSNGSTSMGSVCASTLSLYNAGVPLAAPVAGIAMG
LVSGEVDGETEYVALTDILGAEDAFGDMDFKVAGTREFITALQLDTKLDGIPSSVLADAL
NQARDAREAILDTMSEVIEGPDEMSPLAPKITTVKVPVSKIGEVIGPKGKTINQITEDTG
AEVSIEDDGTVFVSAASGEAADAAVEKINAIANPQLPKVGERYLGTVVKTVAFGAFVSIM
PGTDGLIHISNLGGNTRVENVEDVIHVGDKVEVEIRDIDNRGKISLVPVEDGE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgacaaccttcgaaggagagagatccttttgagcttcacaccgaacaacagc
ttcgacgtcaacgtcgacgaggacttcggcctcaccgaggctgtggccaccctggacaac
ggcgactttggcacccgcaccgtgcggttcgagaccggccagctcgcccgccaggccgac
gggtccgtgaccacgtacctcgacgaggagacgatgctgctggccaccaccacggcgtcg
aaccagccgcgcgagggcttcgacttcttcccgctcaccgtggacgtcgaggagcgcatg
tacgccgcgggcaagatcccgggctccttcttccgccgcgagggccgcccgtcgacgcag
gcgatcctcgcctgccgcctcatcgaccgcccgctgcgccccaccttcgtcaagggcctg
cgcaacgaggtgcaggttgtcatcaccgtgctctcccagcacccggaggagtactacgac
gtcgtggccatcaacggtgcgtccgccgcaacgcagctgtccggcctgccggtctccggc
cccgtcggcggcgtgcgcatggcgctgctcgcggacgacaagcacccggagggccagtgg
gtcgcgtttccgaaccacgagcagcacgagcgctgcctcttcgagatggtggtcgcgggc
cgcatggtcgagcgcaagcgcggccgcaagaccgaggaagacgtcgccatcatgatggtg
gaggctggcgctggcgtgaacgttgtcaagcaggtcgaggccggctacccggcgccgacc
gaggcgaccgtcgccgagggcctcgaggccgcgaagccgttcatcgagacgctgtgccgc
gcgcagcgcgccctcgccgacgaggtggccaaggatacgaaggagttcccgctcttcccg
gcctactccgacaaggtctttaccgcggtggagaagaagtccgcgaagaagctggcgaag
ctgctcaccattaagggcaaggccgagcgcgacgacgcgacgaacgcgtacatggaggag
atcgaggagcagctgcttgacaccttcgacatcgacgacgacgaccgcgaggccgtcgcg
gccgcctcgaaggagatccgcgccgcctacaacgcggtgatgaagcagatcgtgcgcgag
aagatcctctccgagggcttccgtatcgacggccgagggctcaccgacatccgcgacctc
gaggtggaggtccagctcgttccgcgcgcccacggctccgccctgttcgagcgcggcgag
acgcagatcctcggtgtgaccacgctggacatgctgaagatggagcagcacatcgactcc
ctcaccccggaggactcgaagcgctacatccaccactacaacttcccgccgtactccacc
ggcgagacgggccgcgtcggttccccgaagcgccgcgagatcggccacggcgcgctcgcc
gagcgcgcactgctgccggtgatcccgccgcgcgaggagttcccgtacaccatccgccag
gtctccgaggcgctcggctcgaacggctcgacctcgatgggctccgtctgcgcgtcgacg
ctgtcgctctacaacgcgggcgtgccgctggccgccccggttgccggcatcgcgatgggc
ctcgtctccggcgaggttgatggcgagaccgagtacgtcgcgctcaccgatatcctcggc
gccgaggacgcgttcggtgacatggacttcaaggtcgccggcacccgcgagttcatcacg
gccctgcagctggacacgaagctcgacggcatcccgtcgagcgtgcttgccgatgccctg
aaccaggcgcgcgacgcccgcgaggcgatcctggacaccatgtccgaggtcatcgagggc
ccggacgaaatgagcccgctcgcgccgaagatcaccacggtgaaggtgcccgtatccaag
atcggcgaggtcatcggcccgaagggcaagaccatcaaccagatcacggaggataccggc
gccgaagtgtccatcgaggacgacggcacggtgttcgtctcggccgcctcaggcgaggcc
gcggacgcggcggtggagaagatcaacgcgattgccaacccgcagctgccgaaggtcggc
gagcgctacctgggcaccgtggtcaagaccgtcgcgttcggcgcgttcgtctccatcatg
ccgggcaccgacggcctcatccacatctccaacctgggcggcaacacccgcgtggaaaac
gtcgaggacgtcatccacgtcggcgacaaggtcgaggttgagatccgcgacatcgacaac
cgcggcaagatctcgctcgtgcccgtagaggacggcgagtaa
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