Corynebacterium jeddahense: CJEDD_07955
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Entry
CJEDD_07955 CDS
T08816
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cjh
Corynebacterium jeddahense
Pathway
cjh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cjh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CJEDD_07955 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjh03400
]
CJEDD_07955 (fpg1)
Enzymes [BR:
cjh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CJEDD_07955 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CJEDD_07955 (fpg1)
DNA repair and recombination proteins [BR:
cjh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CJEDD_07955 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
DUF7573
ABC_trans_N
NFACT_N
C1_2
Auto_anti-p27
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
WCZ39184
LinkDB
All DBs
Position
complement(1656397..1657218)
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVEVVRRGLDRHVVGRTFGAVEVLHPRAARGNAVDLEQVLPGLTVTGTGRRGKYL
WLTLDDGAALLVHLRMSGQMLVATHGAIASPHLRIRADIGDAELCFVDQRTFGFWQYTAL
AGGVPEPASHIAPDPFEEEFDLREAARAMRRRRSALKTVLLNQEVVSGIGSIYADEAMWA
ARLRPWRSAKTMRQRDAEAVLVASREVMARSLEQGGTSFDALYVNVNGASGYFSRSLNAY
GQAGRPCARCGTPIERVVVGGRSSYYCPACQVL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaggttgaggtggtgcgccgcggcctcgaccgccacgtggtgggg
cgcacgttcggggccgtcgaggtgctccacccccgcgccgcccgcggcaacgccgtcgac
ctggagcaggtgttgccgggcctgaccgtcacgggcacggggcgtaggggcaagtacctg
tggctcacgctcgacgacggcgccgcgctgcttgtgcatttgcgcatgagcgggcagatg
ctcgtcgcaacgcacggcgccatcgcctcgccccacctgcgcatccgcgcagacatcggg
gacgcggagctgtgcttcgtggaccagcgcacgttcggattctggcagtacaccgcgctg
gccggcggcgtgccggagccggcgtcgcacatcgcgccggacccgttcgaggaggagttc
gacctgcgcgaggcggcgcgggcgatgcggcggaggcgctccgcgctgaagacggtgctg
ctcaaccaggaggtggtcagcggcatcgggtcgatctacgcggacgaggcgatgtgggcg
gcgcggctgcgaccgtggcgcagcgcgaagacgatgcgccagcgcgacgccgaggcggtg
ctcgtggcctcgcgcgaggtcatggcgcgctcgctcgagcagggcgggacgagcttcgac
gcgctctacgtcaacgtcaacggcgcgtcggggtacttctcccgctcgctcaacgcctac
gggcaggccggccggccctgcgcgcggtgcggcacgccgatcgagcgtgtcgtggtgggc
gggcgctcgagctactactgcccggcgtgccaggtgttgtag
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