Corynebacterium jeddahense: CJEDD_08140
Help
Entry
CJEDD_08140 CDS
T08816
Symbol
dnaE2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cjh
Corynebacterium jeddahense
Pathway
cjh03030
DNA replication
cjh03430
Mismatch repair
cjh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJEDD_08140 (dnaE2)
03430 Mismatch repair
CJEDD_08140 (dnaE2)
03440 Homologous recombination
CJEDD_08140 (dnaE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjh03032
]
CJEDD_08140 (dnaE2)
03400 DNA repair and recombination proteins [BR:
cjh03400
]
CJEDD_08140 (dnaE2)
Enzymes [BR:
cjh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJEDD_08140 (dnaE2)
DNA replication proteins [BR:
cjh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJEDD_08140 (dnaE2)
DNA repair and recombination proteins [BR:
cjh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJEDD_08140 (dnaE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WCZ39221
LinkDB
All DBs
Position
complement(1695348..1698917)
Genome browser
AA seq
1189 aa
AA seq
DB search
MTAMAKNSSFVHLHNHTEFSMLDGMAKVDLLAEEVSRQGMPAVGMTDHGNMFGSNAFYRR
MVSAGIKPIIGIEAYMAPESRFNKKRVQWGTPDQKADDVSASGAYLHQTMLAENATGLHN
LFKLSSLASYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQYDAALEAAA
MWQDIYGKDNYFLELMDHGLHIERRVREDLLRIGETLGLPPLVTNDCHYVLESQAPAHEA
MLCVQTGKTLLDPDRFKFDGSGYYIKSAEQMRELWDSTVPDGCDNTLWIAERVEDYGELW
EEHPHDRMPIADVPEGYTPTTWLREEVLRGLKDRFDGEDVPDEYLTRASYEIDVIDMKGY
PSYFLIVAELIKHAREVGIRVGPGRGSAAGSLVAYALTITNIDPMEHGLLFERFLNPERP
SAPDIDIDFDDRRRSEMITYAAERWGEDKIAQVITFGTVKTKQAIKDSAKVNFGQPGFQM
ADRINGALPPAIMAKDIPLSGITDPEHARYAEAAEVRSLIETDPDVAKIYETARGLEGVV
RQAGVHACAVIMASVPLMDHIPMWKRPADGALITGWDYPACEAIGLLKMDFLGLRNLTVL
GDALENVQKNRGETIDLEALETDDEKVYELLSRGDTLGVFQLDSGGMQELLKRMKPTGFN
DIVASLALYRPGPMGVNAHWDYADRKNGRKPITPIHPELEEPLKEILDETYGLIVYQEQI
MRISQKVANYTAGEADGFRKAMGKKKPEVLAQQYEKFSAGMFDNGYSKEAVDALWGTIEP
FASYAFNKSHAAGYALVSYWTAYMKANYTAEYMAALLTSVGDKKDKSAIYLADCRHLGIS
VLQPDINESEENFIAVGEDIRYGLAAVRNVGTEVVESIKQTRKEKGAFTSFSDYLDKIDL
LACNKRITESLIKAGAFDSLEHPRKGLMLIQEDAVDSVLSTKKAADKGQFDLFASFGGED
GADNAAFAIEVPDDEWDRKHKLALEREMLGLYVSGHPLDGFEDAIDAQTDTQLTTILSGE
MRNGAEVTIGGLISSVDRRYSKKDGSPWAIVTLEDHHGAQVDVLLFNKVYALVAPQIVED
NIILVKAHVSIRDERMSLFGDDVKVPELGPGNGAGLPLRLTMRTDQCTVENIAKLKHVLV
NNPGDSDVYLNLVNGDYSQMMVLGDHLRVNRSASLMGDLKATLGAGILG
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccatggccaaaaactcctcctttgtgcacctgcataaccacaccgaattctcc
atgttggacggcatggcgaaggtggatttgctcgccgaggaggtcagccgccagggcatg
ccggcggtggggatgacggaccacggcaacatgttcggctcgaacgcgttctaccggcgc
atggtgtccgcgggcatcaagccgatcatcggcatcgaggcgtacatggcgccggagtcc
cgctttaacaagaagcgcgtgcagtggggcaccccggaccagaaggcggacgatgtctcg
gcctccggcgcgtacctacaccagacgatgctggcggagaacgcgacgggcctgcacaac
ctgttcaagctgtcctcgctcgcctcctacgaggggcagttgggcaagtggccccgcatg
gacgccgagctcatcgcggaacacgccgacggcatcatcgcgacgacgggatgcccgtcc
ggcgacgtgcagacgaggctgcggctgggccagtacgacgccgcgcttgaggcggcggcg
atgtggcaagacatctacggcaaggacaattatttcctcgagctcatggaccatgggctg
cacatcgagcgccgcgtgcgcgaggacctgctgcgcatcggcgagacgctcggcctgccg
ccgctggtgaccaacgactgccactacgtcctcgaaagccaggccccggcgcacgaggcg
atgctgtgcgtgcaaaccggtaagacgctgctcgacccggaccggttcaagttcgacggc
tcgggctactacatcaagtccgcggagcagatgcgtgagctctgggactcgacggtgccc
gacgggtgcgacaacacgttgtggattgccgagcgcgtcgaggactacggcgagctgtgg
gaggagcacccgcacgaccggatgccgatcgcggacgtgcccgagggctacacgccgacg
acctggctgcgcgaggaagtgctgcgggggctgaaggaccgcttcgatggggaagacgtc
ccggacgagtacctcacccgcgcgagctacgagatcgacgtcatcgacatgaagggctac
ccgtcctacttcctcatcgtcgccgagctgatcaagcacgcccgcgaggtgggcatccgt
gtcgggccggggcgtggctccgcggccggctcgctcgtggcctacgcgctgaccatcacc
aacatcgacccgatggagcacggcctgctcttcgagcgattcctcaaccccgagcgcccg
tccgcccccgatatcgatatcgacttcgacgaccgccgccgcagcgagatgatcacctac
gccgccgagcgatggggcgaggacaagatcgcgcaggtgatcaccttcggcaccgtgaag
acgaagcaggcgatcaaggactcggcgaaggtgaacttcggccagcccggcttccagatg
gcggaccgcatcaacggcgccctgccgcccgcgattatggcgaaggacatcccgctttcc
ggcatcaccgacccggagcacgcgcgctacgcggaggccgccgaggtccgctcgctcatt
gagacggacccggatgtggccaagatctacgagacggcgcgcggcctggagggcgtggtg
cgccaggcgggcgtccacgcgtgcgcggtgatcatggcgtcggtgccgctcatggaccac
atcccgatgtggaagcgccccgccgacggcgcgctgatcaccggctgggactacccggcc
tgcgaggcgatcggcctgctgaagatggacttcctgggcctgcgcaacctcaccgtcctc
ggcgacgcgctcgagaacgtgcaaaagaaccggggtgaaaccatcgacctcgaggcgctg
gagacggacgacgagaaggtctacgagctgctctcgcgcggcgacaccctcggcgtgttc
cagctcgactccggcggcatgcaggagctgctcaagcgcatgaagccgaccgggttcaac
gatatcgtcgcgtcgctggcgctgtaccgaccgggcccgatgggcgtgaacgcgcactgg
gattacgcggaccgcaagaacgggcgcaaacccatcacgccgatccacccggagctggag
gagccgctcaaggagattctcgacgagacctacggcctcatcgtctaccaggagcagatc
atgaggatctcccagaaggtcgcgaactacaccgcgggcgaggcagacggcttccgcaaa
gccatgggtaagaagaagccggaagtgctggcgcagcagtacgagaagttctcggccggc
atgttcgataacggttactcgaaggaggccgtcgacgcgctgtggggcacgatcgagccg
ttcgcctcctacgcgttcaacaagtcccacgcggcgggctacgcgctcgtgtcctactgg
acggcgtacatgaaggcgaactacaccgccgagtacatggcggcgctgctcacctccgtg
ggcgacaagaaggacaagtccgccatctacctcgcggactgtcgccacctgggcatcagc
gtgctccagccggacatcaacgagtccgaagagaacttcatcgctgtcggcgaggacatc
cgctacggtctcgccgccgtgcgcaacgtgggcacggaagtggtcgagtcgatcaaacag
acccggaaggagaagggggcgttcaccagcttctccgactacctggacaagattgacctg
ctggcgtgcaacaagcgcatcacggaatctctgatcaaggcgggtgcgttcgattcgctg
gagcacccccgcaagggcctcatgctgatccaggaagacgctgtcgattccgtcctttcg
acgaagaaggcggcggacaaggggcagttcgacctgttcgctagcttcggcggggaggac
ggggcggacaacgctgcgttcgcgatcgaggtgccggacgatgagtgggaccgcaagcac
aagctcgcgctcgagcgcgagatgctcggcctctacgtctccggccacccgctcgacgga
ttcgaggatgcgatcgacgcgcagacggacacgcagctcaccacgatcctctcgggcgaa
atgcgcaacggcgcggaggtgaccatcggtggcctcatctcgagcgtggaccggcggtac
tcgaagaaggacggctctccgtgggccatcgtgacgctcgaggaccaccacggcgcccag
gtggacgtgctgctgttcaacaaggtctacgcgctcgtggcaccgcagatcgtggaggac
aacatcatcctggtgaaggcccacgtctccatccgcgacgagcgaatgagcctcttcggc
gacgacgtgaaagtgccggaactcggcccaggcaacggggcggggctaccgctgcggctc
acgatgcgcacggaccagtgcaccgtggaaaacattgcgaaactcaagcacgtgctggtg
aacaatccgggggactcggacgtgtacctcaacctcgtgaacggcgactacagccagatg
atggtgctgggagaccacctgcgcgtgaacaggtctgcgagcctcatgggggacctcaag
gccacgctcggcgcgggcatcctggggtaa
DBGET
integrated database retrieval system
