Campylobacter jejuni subsp. jejuni IA3902: CJSA_0944
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Entry
CJSA_0944 CDS
T01854
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cji
Campylobacter jejuni subsp. jejuni IA3902
Pathway
cji02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cji00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CJSA_0944 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cji03021
]
CJSA_0944 (rpoD)
Transcription machinery [BR:
cji03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CJSA_0944 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_ner
Sigma70_r4_2
MCR_beta_N
Motif
Other DBs
NCBI-ProteinID:
ADC28583
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All DBs
Position
934059..935927
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AA seq
622 aa
AA seq
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MNAKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTTKKVQALMKKHKVQLFSAAEI
AQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRSDSPVRMYLREMGQIALLN
KDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSFDDEEKSD
DKLDELDIDEDEENETELESDEENTKKNSKKEDERTLKVIEKFKALEKAKKDWLKTSKDK
ESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEIVKSMETALKSDEEFDKELKRLEYR
LPMFSDELKKRHADILKDITKLSKEEITERALETTMVSTYMEIKKLFQTKEASEKSFDLE
KSRLKEILEQIKRGKKISDEAKGRMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMK
AVDKFEYKRGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINQINKIIREHLQKD
GKEPDVSVIAKEVGLSVDKVKQVIKITKEPISLEAPIGNEDDGKFGDFVEDRNSLSPMDH
ILKDDLKEQIDEVLDQLNDREKAVIRMRFGLMDDESDRTLEEIGKELNVTRERVRQIESS
AIKKLKHPKVGRKLKNYIEGWK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaaaactcaagaagctgaattagaagaattatttcaagaaaatgcaaaagat
tatatcacatatgaaaaattggtaaaatatcttacaaaacaaccaagtgcatcaaccact
aaaaaagtgcaagcattaatgaaaaaacacaaagtgcaacttttttcagcagctgaaatt
gcacaaatgaaaaacatagaagatgcaaaaagacttcaagaagaaaaacaaaaactccaa
gatacaagccttgagaacgaatttgatttagccaatgaaaacgatttattagaatggagc
agatcagactctcctgttcgtatgtatttaagagaaatgggacaaattgctttattaaac
aaagatgaagaaattgaaatttccaaaaaaatagaacttggcgaagatattatcattgat
gctttttgttctgtaccttatttgatagattttattttagattataaagaacctttaata
aacagagaaagaagggtaaaagaactatttaaaagctttgacgatgaagaaaaaagtgat
gacaaacttgatgaacttgatatagatgaagatgaagaaaacgaaacagaattagaatca
gatgaagaaaatactaaaaaaaacagcaaaaaagaagatgaaagaactttaaaagttata
gaaaaatttaaagctctagaaaaagctaaaaaagattggctaaaaacatccaaagacaaa
gaaagcggagatgaacttttagataaattaagcattgcgttcaaaaaaaatattttaaaa
gaaaaattaatggatctaggccctacttcaaaacttattagcgaaatcgtaaaatcaatg
gaaactgcactaaaaagtgatgaagaatttgacaaagaacttaagcgtttagaataccgc
ttacctatgttttctgatgaacttaaaaaacgccatgcagatattttaaaagatattaca
aaattgagcaaagaagaaatcacagagcgagctttagaaacaaccatggtaagcacttat
atggaaattaaaaaactatttcaaactaaagaagccagtgaaaaaagctttgatcttgaa
aaatcacgcttaaaagaaattttggagcaaattaaacgcggtaaaaaaatctctgatgaa
gcaaaaggaagaatggcaaaatcaaacttgcgccttgttgtaagcatagctaaacgctac
acaaatcgtggtctgcctttcttagaccttatccaagaaggaaatataggtttgatgaaa
gctgtggataaatttgaatacaaaaggggttataaattttccacttatgcaacttggtgg
atcaggcaagctatttcaagggctatagctgatcaagcaagaaccataagaattccaatc
catatgatagaaaccatcaatcaaattaacaaaattatccgcgaacatctacaaaaagat
ggaaaagaacctgatgtcagtgttatagctaaagaagtaggtttaagcgtagataaggtt
aaacaagttattaaaatcacaaaagaaccaatttctcttgaagctccaataggaaatgaa
gatgatggtaaatttggagattttgttgaagatagaaattcactttctccaatggatcat
atcttaaaggatgatttaaaagaacaaattgatgaagttttagatcaattaaacgataga
gaaaaagcggtaattcgtatgcgttttggtttaatggatgatgaaagtgatagaacttta
gaggaaattggaaaggaacttaatgtcactcgagaaagagtgagacaaatagaaagctca
gctataaaaaaactcaaacaccctaaagtaggaagaaaactaaaaaattatatagaaggt
tggaagtaa
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