Campylobacter jejuni subsp. jejuni IA3902: CJSA_1192
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Entry
CJSA_1192 CDS
T01854
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cji
Campylobacter jejuni subsp. jejuni IA3902
Pathway
cji03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cji00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJSA_1192 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cji03019
]
CJSA_1192 (pnp)
03016 Transfer RNA biogenesis [BR:
cji03016
]
CJSA_1192 (pnp)
Enzymes [BR:
cji01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CJSA_1192 (pnp)
Messenger RNA biogenesis [BR:
cji03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CJSA_1192 (pnp)
Transfer RNA biogenesis [BR:
cji03016
]
Prokaryotic type
tRNA degradation factors
CJSA_1192 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_RRP5
CTD9
DUF6599
Motif
Other DBs
NCBI-ProteinID:
ADC28830
LinkDB
All DBs
Position
1187920..1190079
Genome browser
AA seq
719 aa
AA seq
DB search
MQYSIEINKNTEIFDIDKVAKQAAGAVLMRQGKSVVLATVAREEKQVEEDFLPLTVQYIE
KAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGYAYPTQIVVMVLSADPKVD
LQVMSLNAASVALYLSDIPMKAPVCGVRIGKIDGNFILNPNNEELQNSTLDLYVAGVKDE
LLMIEMRALPDQKENEIFIEAPYADVLTQTTSQNMNELSEDEILEALNLAQKAILNGSNA
YEEAFSKHKKNSQIELKNEIEHPEILAFIENNFQKQIKEAINQMAKSERASELNKIAKEI
LNLEITKDWSEESVLNTLAKVKRKLIREQILNEGKRADGRSLNEVRPISIETNILPNAHG
SCLFTRGQTQALVVATLGGENDSQMIDLLTEKNPISERFMVNYNFPGFSVGEASPIKAPG
RRELGHGNLAKRALYPSVDENYPYVIRLVSEILESNGSSSMATVCGGSLALKAAGVPSLK
LVAGVAMGLIFEDNKYAVLTDIMGLEDHDGDMDFKVAGSKDGVTALQMDIKLGGIDQEIL
KQALYQAKEGRIHILNIMEEAAKEIIVNEEVLPKLELFSVDPSKIVDIIGQAGKTIKEIV
EKFGVSIDLDREKGEVKIAGSQNEQIKAAKDYIINITSSQKGTKKGPKDKDISGFELGQE
FQGIVKKIAPFGAFVELKNGVDGLLHSSKIKHLNLSENQSLKVKISEIKNGKISVDLCE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacagcatagaaattaacaaaaatacagaaatatttgatatagacaaagtcgcc
aaacaagctgccggtgctgttttaatgagacaaggcaaaagcgttgttctagctacagtt
gcaagagaagaaaaacaagttgaagaagattttttacctctaaccgtccaatacatcgaa
aaagcttatgccgcaggaaaaatccctggtggttatgtcaaaagagaaaccaagccaagc
gatgcagaaaccttaacagcacgcattattgatagaagcttacgccctctttttccaaaa
ggctatgcttatccgactcaaatcgttgtgatggttctctcagctgatcctaaagtagat
ttacaagtaatgagcttaaatgccgcaagcgtggcactttatcttagtgatatacctatg
aaagctccagtatgtggtgtgcgtataggaaagatagatggaaatttcatactcaatcca
aacaatgaagagcttcaaaatagcaccctagatctctatgtagcaggtgtaaaagatgag
cttttgatgatagaaatgagagccttacctgatcaaaaagaaaatgaaatctttatcgaa
gctccttatgctgatgttttaactcaaaccacttcacaaaatatgaatgaacttagcgaa
gatgaaattttagaagctctaaatttagctcaaaaagctatattaaatggttcaaatgct
tatgaagaagcctttagcaaacacaaaaaaaattctcaaatcgaactaaaaaatgagatt
gaacatcctgaaattttagcttttatagaaaataatttccaaaaacaaatcaaagaagcc
atcaatcaaatggcaaaaagcgaaagagcaagcgaactaaataaaatcgctaaagaaatt
ttaaatcttgaaatcactaaagactggagtgaagaaagtgtcttaaataccttagctaaa
gtcaaacgcaaacttattcgtgagcaaattttaaatgaaggcaaaagagctgatggtaga
agtttaaacgaggttcgtcctattagtatagaaaccaacatcttaccaaacgctcatggt
tcttgtcttttcactcgtggacaaactcaagccctagtggttgcaaccttaggcggagaa
aacgattctcaaatgatagacttgcttacagaaaaaaatcctataagcgaacgctttatg
gtaaattataattttccaggtttttcagtaggcgaagcaagtcctatcaaagctccagga
agaagagaactaggacatggaaatttagccaaaagagcactttatccaagtgtggatgaa
aactatccttatgtaatccgcttagttagtgaaattttagaaagcaatggctcaagttcc
atggcaacggtttgtggcggatctttagccttaaaagcagcaggagtgccaagcttaaaa
cttgttgcaggagtagccatggggcttatctttgaagataacaagtatgctgttttaaca
gatatcatgggacttgaagatcatgatggggatatggactttaaagtagcaggaagcaaa
gacggcgttactgctcttcaaatggatataaaactaggtggaatcgatcaagaaatacta
aaacaagctttataccaagccaaagaaggaagaattcacattctaaatatcatggaagaa
gccgccaaagaaatcatagtcaatgaagaagttttacctaaacttgagctttttagcgtt
gatccttcaaaaatcgttgatatcataggacaagccggaaaaaccatcaaagaaatcgta
gaaaaatttggcgtttctatagacttagatcgcgaaaaaggtgaagtaaaaatagcaggt
agtcaaaacgagcaaatcaaagccgcaaaagactacatcataaacatcacaagctctcaa
aaaggaactaaaaaaggccctaaagacaaagatatatcaggctttgaacttgggcaagaa
tttcaaggtattgttaaaaaaatcgctccttttggagcctttgtggaacttaaaaatggt
gttgatggtttattgcatagttcaaaaatcaagcatcttaatttaagcgaaaaccaaagt
ttaaaggtgaaaatcagcgaaattaaaaacggaaaaatttctgtggatttgtgcgagtga
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