Campylobacter jejuni subsp. jejuni 81-176: CJJ81176_0055
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Entry
CJJ81176_0055 CDS
T00461
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cjj
Campylobacter jejuni subsp. jejuni 81-176
Pathway
cjj03410
Base excision repair
cjj03430
Mismatch repair
cjj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CJJ81176_0055 (recJ)
03430 Mismatch repair
CJJ81176_0055 (recJ)
03440 Homologous recombination
CJJ81176_0055 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjj03400
]
CJJ81176_0055 (recJ)
DNA repair and recombination proteins [BR:
cjj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CJJ81176_0055 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CJJ81176_0055 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CJJ81176_0055 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Response_reg
Motif
Other DBs
NCBI-ProteinID:
EAQ71903
UniProt:
A0A0H3P989
LinkDB
All DBs
Position
35865..37436
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AA seq
523 aa
AA seq
DB search
MKIINKNEIKKILASRFEKDLHTKLCDLPLPCCLKDAYKAANRIKEAVEKNEKVAIVGDY
DVDGIISCVIMAEFFDDIGFDYIIRIPNRFKDGYGLNAEIINELDVNLIITVDNGIAALE
AAKLCKEKNIDLIITDHHMPQDVLPDAFAIINPKQKDCDFPEIEICGAQVAWYLIAALKE
VCKLKYDMCKFLELLAIAIVADMMELRDLNRALVRRGIDHINKSKRAAFRAIKHYYQKDK
FALDNIGFLIAPLINSAGRMDDASISYEFLHTKDFNKALEYLEQIVSFNESRKDEEKQLF
EDSLNQIDENDSCIVVSGLNWHEGVLGIVASRLAKHFNKPAFVFSQNEEHLKGSARSVGK
IDILALISKTNSILSNYGGHKGAAGISLNSENFEQFKNKIKKECSQISESEFLDTDEILG
ILEPSEIDFEMLEILESFEPFGHKNPRPFFVLENLCVKNKKLLGKDEKHLKLVLTKENKT
IEALFFNFDKEPELNQNISLLGSISKNEFRGMVTPQFVIKEIL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaagataattaataaaaatgaaattaaaaaaattttggcttcacgctttgaaaaagat
ttgcataccaaactttgtgatctgcctttgccatgctgtttaaaggatgcatataaagca
gctaatcgcatcaaagaagctgtagaaaaaaatgagaaagtcgccatagtaggagattat
gatgttgatggaatcatttcttgtgttattatggcagaatttttcgatgatataggtttt
gattatattataagaattccaaatcgttttaaagatggatatggattaaatgctgagatc
atcaacgaacttgatgtaaatttaataataacagtagataatggaatagctgctcttgaa
gcagccaaactctgtaaagaaaaaaatatagatttgattatcactgatcatcatatgcct
caagatgttttacctgatgcttttgccattatcaatccaaagcaaaaagattgtgatttt
ccagaaattgaaatttgtggagctcaagtcgcatggtatttgatagcggctttaaaagag
gtgtgcaagcttaaatatgacatgtgtaaatttttagaacttttggcgattgcaattgtt
gcagatatgatggaacttagagatttaaatcgtgctttagtaaggcgtggcatagatcat
attaacaaatctaaaagggctgcttttagggctattaagcattattatcaaaaggataaa
tttgctcttgataatataggatttttaattgctccgcttataaatagtgctggaagaatg
gatgatgcaagtatttcttatgaatttttacacactaaagattttaataaagctttagaa
tatctagagcaaattgttagttttaatgaaagtcgtaaagatgaagaaaaacagcttttt
gaagatagtttaaatcaaatcgatgaaaacgattcttgtattgtggtatcgggtttaaat
tggcatgaaggtgttttagggattgtggcaagtcgtttagctaaacattttaataaacct
gcttttgtattttctcaaaatgaagaacacctaaaaggcagcgcaagaagtgttggcaag
attgatattttagctttaatttctaagacaaattctatattaagcaattatggtggtcat
aaaggtgctgctggaatcagtttaaactctgaaaattttgaacaatttaaaaataaaatc
aaaaaagaatgttcgcaaatttctgaaagtgaatttttggatacagatgaaattttagga
atcttagaacctagcgaaattgattttgaaatgcttgaaattttagaatcttttgaacct
tttggacataaaaatccacgacctttttttgttttagaaaatctttgtgtaaaaaataaa
aaacttctaggtaaagatgaaaaacacttaaagcttgttttaactaaggaaaataaaacc
atagaagctttattttttaattttgataaagagccagaattgaatcaaaatatttctttg
cttggaagtatttctaagaatgaatttaggggaatggtaactccacaatttgttattaaa
gaaattttataa
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