Campylobacter jejuni subsp. jejuni 81-176: CJJ81176_1173
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Entry
CJJ81176_1173 CDS
T00461
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cjj
Campylobacter jejuni subsp. jejuni 81-176
Pathway
cjj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJJ81176_1173 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjj03021
]
CJJ81176_1173 (rho)
03019 Messenger RNA biogenesis [BR:
cjj03019
]
CJJ81176_1173 (rho)
Transcription machinery [BR:
cjj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CJJ81176_1173 (rho)
Messenger RNA biogenesis [BR:
cjj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CJJ81176_1173 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Spore_III_AA
AAA
ATPase_2
OB_RNB
OB_RNR_1st
Mor
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
EAQ72258
UniProt:
A0A0H3P9G3
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All DBs
Position
1090047..1091345
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AA seq
432 aa
AA seq
DB search
MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPREFRRQELIFEILKAQT
KKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQIRKFALRVGDIVTGQVRE
PKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTEKIKLEYDAMKLTGRVLDLFT
PIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEMHLIVLLVDERPEEVTDMQRCVKGE
VFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVIILLDSITRLARAYNTATPSSGKVLS
GGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEEFKGTGNSEIVLD
RNIADRRIYPAINIIKSGTRKEELLQGVANLQKIWAIRSAISQMDDVEALKFLYSKMLKT
KDNVELLSIMNE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaaaaaaacaacatcaaagaacccacgttccagtggaaggttataaaatt
gaagaattaaaattattagatctagaaaatctagttaaaatcgctaatgaatgtgaaatc
gaaaatccaagagaatttcgccgccaagaacttatttttgaaattttaaaagcacaaaca
aaaaaaggcggtttcatactttttacgggtatcttagaaatttcttctgaaggttatggc
tttttaagaggcatggactccaatcttagtgatagtgttaatgacgcttatgtttcaaat
tcacaaattagaaaatttgctctgcgtgtaggcgatatcgttacaggacaagttagagaa
cctaaagatcaggaaaaatactacgctcttttaaaaatcgaagcgatcaattatctgcct
ttacaagaagccaaagaaagacctttgtttgataacttaacccctatttttccaacagaa
aaaatcaagctcgaatacgatgcgatgaagcttacaggccgtgttttagatctttttacc
cctataggaaaaggacaacgcggactcatcgttgctccaccacgcacaggtaaaacagag
cttatgaaagaacttgctactgccattgcaaaaaaccatcctgaaatgcatttaatcgtg
cttttagtcgatgaaagacctgaagaagttaccgatatgcaaagatgtgtaaaaggggag
gtttttagttctacttttgatttacctgcttataatcatgtgcgtgtagctgaactcgtg
atagaaaaagccaaaagaatggtagaaacaggtaaagatgttattatcttacttgatagc
atcacaagactggcgcgtgcttataacaccgcaactccaagcagtggaaaagtcctaagc
ggtggggtagatgctaatgctctgcacaaaccaaaacgcttctttggcgcagctagaaat
atagaaaatggaggctctttaaccatagttgctacagctttaattgacacaggttcaaga
atggatgatgtgatttttgaagaatttaaaggcacaggaaatagcgaaatagttcttgat
agaaatattgccgatagaagaatttatcctgcgattaatatcatcaaatcaggaacaaga
aaagaagaattactccaaggcgtggcaaatcttcaaaaaatttgggcgatccgttcagcg
atttctcaaatggatgatgttgaggcattgaaatttttatattctaaaatgcttaaaacc
aaagacaatgtagaacttttatctataatgaacgagtaa
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