Corynebacterium jeikeium: jk1564
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Entry
jk1564 CDS
T00255
Symbol
pcrA
Name
(GenBank) putative ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cjk
Corynebacterium jeikeium
Pathway
cjk03420
Nucleotide excision repair
cjk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
jk1564 (pcrA)
03430 Mismatch repair
jk1564 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjk03400
]
jk1564 (pcrA)
Enzymes [BR:
cjk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
jk1564 (pcrA)
DNA repair and recombination proteins [BR:
cjk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
jk1564 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
jk1564 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAI37737
UniProt:
Q4JTX0
LinkDB
All DBs
Position
complement(1835017..1837509)
Genome browser
AA seq
830 aa
AA seq
DB search
MVAGETGRHIEKLLEGLNPQQRQAVEHMGSPLLIVAGAGSGKTSVLTRRIAYLLANGVAP
WQILAITFTNKAAAEMRERVMDMVGPQAERMWVSTFHSFCVRVLRANAHLAPGLNTNFSI
YDSDDSKRLMTMIIKDASLDLKEFSPRGVLNVISNWKNELVGPVGALEEAQRDSNPHTAQ
IATLYKTYQNRLRAANAVDFDDLIGEVVAILNNNPDVREHYRRRFRHIMVDEYQDTNHAQ
YELVAALAGKGKAECELCVVGDADQSIYAFRGATIRNIEEFERDYPDAHTILLEQNYRST
QKILSAANAVIDRNQGRRPKKLWTDLGDGELIGGYVADNEHDEANFIVEQIDDLVDNEGY
SYGDISVMYRTNNASRAIEDVLVRSGMPYKVVGGTRFYERREIRDIVAYLKVLDNADDTV
ALRRIINTPRRGIGDKAIAQVTVHAEGQGIGFSAALGDAAAGKVAGLSPRGRNSIGKFLE
MMDALRAETESMEMTASDGSGLGLPDLGRVISAVLDVTGYKELLEKSNDPQDGARLDNLN
ELVSVGHEFSQESANLKAYEEMPGGGAGDAESDSSSDSAESAEAMLAEGEAPLGSLQAFL
ERVSLVADADQIPADEQDMVTLMTLHTAKGLEFPVVFLTGWEDGQFPHMRALGDPTELAE
ERRLAYVGITRAKQRLFLTRAITRSGWGAPVNNPPSRFLSEVPEDLMEWIREEPARFGSG
MDSAWGGGGYADGTSFGGSGGSGGWGSSSSWGSQSYRKPAKKAKPAFGAGAKKNQDLDLA
VGDKVNHDKYGLGTVKSVDGSGSHTTCMIDFGSQGTVRLMLFGGVPMEKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcgggggagacggggcgtcatatagaaaagctcctcgaaggccttaacccgcaa
cagcggcaggcagttgagcacatgggtagtccgctgctgatcgtggctggcgcaggttcc
ggtaagacgagtgtgctgactcgccgcatcgcatacctgctggcaaacggggttgcccct
tggcagatcctggcgattaccttcaccaataaagccgcggcagagatgcgcgagcgcgtg
atggacatggttggcccgcaggcggagcgtatgtgggtctccaccttccactctttctgt
gtgcgcgtgctgcgcgccaatgcgcacctcgcgccggggctgaacactaacttcagcatt
tatgactcggacgattccaagcgtctgatgacgatgatcatcaaggatgcctcgctggac
ttgaaggaattctcgccgcgtggggtgctgaacgtgatttccaattggaagaacgaactg
gtcggcccggtcggagcgttggaggaggcgcagcgcgattccaacccccacacggcccag
atcgccacgctgtacaagacgtatcagaaccgcttgcgggcggcgaatgcggtggacttc
gacgacctgatcggtgaggttgtggcgatcctgaacaataacccggacgtgcgcgaacac
tatcggcgccgtttccgtcacatcatggtcgacgagtaccaggacaccaaccatgcgcaa
tacgagctggtggcagcactcgcgggcaagggtaaggctgagtgcgagttgtgtgtggtg
ggtgatgctgatcaatcgatctacgccttccgtggagcgacgattcgcaatatcgaggag
ttcgagcgcgactacccggatgctcacacgatcctgcttgagcagaactaccgctctacg
cagaagatcctgtccgccgccaacgcagtgattgaccggaaccaggggcgccgcccgaag
aagctgtggacggatctgggggatggcgagctgatcggcggctacgttgcagacaacgag
cacgacgaggcaaacttcatcgtcgagcagatcgacgacctggtggacaacgagggctac
tcctacggcgacatctcggtcatgtaccgcaccaataacgcctctcgtgcgatcgaggac
gtgctggtgcgctccggcatgccgtacaaggtcgtcggtggtacgcgcttctacgagcgc
cgggagatccgcgatatcgtggcatacctcaaggtgctagacaacgcggatgacacagtg
gctctgcggcgcatcatcaacaccccacgtcgtggcatcggggacaaggctatcgcgcag
gtcactgtgcacgcggaaggccaggggatcggtttttcggctgctcttggtgacgccgcc
gcggggaaggttgctggcctttccccacgcgggcgcaattccattggcaagttcctggaa
atgatggatgcgctgcgggcggagactgagtctatggagatgacggcctcggacgggtcc
ggcttggggctgcccgacctggggcgggtgatctccgcggtgctggatgtgaccggctac
aaggagctgctggagaagtccaacgacccgcaggacggtgcgcgcctggacaatttgaac
gagttggtcagtgtagggcatgagttctcgcaagagtcggcaaaccttaaggcatacgag
gagatgccgggaggtggtgctggcgacgctgagagcgacagcagcagcgacagcgccgag
tctgccgaggccatgctcgctgagggggaggcgccgctgggcagccttcaagccttcctg
gaacgtgtgagcctggtggcggacgcggatcagattccagcggatgagcaggacatggtg
acgctcatgacgctgcacaccgccaagggactggagtttcccgtggtgttcctgactggc
tgggaggacggccagttcccgcatatgcgcgcgctgggggacccgacggaactggctgaa
gagcgccgcctggcctatgtgggtattacccgcgcgaagcagcggttgttccttacccgc
gcgattacacgcagcggatggggagcgccggtgaacaatccaccgtcgcgcttcttgtcc
gaggtgccggaggacctgatggagtggatccgcgaggagcccgcccgcttcggcagcggt
atggattccgcctggggcggtggtggctatgccgatggcaccagcttcggcggctcaggc
ggctcaggcggctggggcagctcaagtagctggggtagccagtcctatcggaagccagcg
aagaaggcgaagcctgcatttggagccggagcgaagaagaaccaggatctggacttggcg
gtgggcgacaaggtcaaccatgacaagtatggcctgggcacggtgaagagcgtggatggc
agtggttcgcacactacttgcatgatcgacttcggcagtcagggcacggtgcgcctgatg
ttgttcggcggagtgccgatggagaagctctag
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