Corynebacterium jeikeium: jk1611
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Entry
jk1611 CDS
T00255
Name
(GenBank) putative ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cjk
Corynebacterium jeikeium
Pathway
cjk03420
Nucleotide excision repair
cjk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
jk1611
03430 Mismatch repair
jk1611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjk03400
]
jk1611
Enzymes [BR:
cjk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
jk1611
DNA repair and recombination proteins [BR:
cjk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
jk1611
MMR (mismatch excision repair)
Other MMR factors
jk1611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAI37785
UniProt:
Q4JTS2
LinkDB
All DBs
Position
complement(1887006..1890623)
Genome browser
AA seq
1205 aa
AA seq
DB search
MDSNRHIFSPQELSQLMGQKFAPTDEQADVIQAGPFGNFLVVAGAGAGKTETMAARAVWM
VANGYARPEQILGLTFTRKAAAELGERIRQRLQTLAGSAFMDQLSADDPRREVLKNIAPA
VATYDSYAGDIVREYGLLIPSEPAARLITDAERWMVARDVVINSGDSLTTQTAVSSVIAD
VCALSDEMDNHLVGIAAVEQESAAAKKLLEELPKGPRSKKEFTDENTKFRDTQQYRIELL
KLVQKFRETLQERDLLTFGQQMSKAATLVRDHEVVGQDQRRRFRVVMLDEYQDTGHAQRV
MLRSLFGDGRAGEGSFSAMAVGDPMQSIYQFRGATASNLEKFRTDFPNAAGEPAEKLQLL
TSWRNPTMVLDMANRVSTWSMERSTESTGRLVSELRPRPGAAEGESAVAFFDEREQELDW
LADKLQSQWRDHQRKLETADDPAKVKPFSAAVLVTVNKDAVPIYEKLVERGVPADMTAGP
GLLDIPEVADVFAMLRVLVDPTDDVALLRLLTGPRWNLGAADLAVLTRRAEQIAKRGAGE
ADAIDDSVMERQRREAIELLRTPGVRDELIEEVLEAIPNATEFSVGLIDALADLTDAEEM
GMSAEGSRRLAQLGRELGYLRRHSLGKNLPDLVADIEKMLGVRTEVLTRWHRRPEQAIGT
SHLDKFAQIVRDVSRAGSATPKALVEYLLAAQSEEDGLDPGEVQRKDNTVQILTVHKAKG
LEWDIVAVPHASRERYGDYSQPRSESAWTIKARVLPSSLRGDAGDGPGAYPTLVTDDAED
RSGHTKAYKEFNKQVSRFRAKENDRLFYVAITRSERVLFVSGSAFKESASKGNDPSICLT
LLHEYLEQSGVAANVEHWSGMGMYYKDLDTRLDNPDLPLEDKLMLPTPQINGERGDYEEE
RKERDTVATAGASWPSPAPAMTRPGVAEGAEQVRKEIEAVSQQEEQDGQSRPAPGATADG
APTTLAEAWDLETNLLLEEFSAMDNAELVVPLNVRMTATEAVSLRKDNQEFALRARRPIP
LEPKPYAKRGTAFHNWVEERYKQVSLLDEDQLPGASDATLEDPYLETLKDAFLRSEWADR
QPESVEGAYSVTIGGHVFEGRIDAVFHDGTDPTAGWIVVDWKTGRKPTGADMDAAAMQLA
VYRLAWAKLLSAKLGVEVPAENVRAAFHYVAANETYEPRTLLSADELEGMLGGVTKKTTQ
GDHEQ
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaaccgacacatctttagcccccaagagctatcccagctgatggggcagaag
tttgctccgactgacgagcaggcggacgttatccaggccggtccgttcggtaatttcctt
gtcgtcgccggcgctggtgcgggtaagaccgaaacaatggcagcgcgtgcagtgtggatg
gtggccaacggctacgcccggcccgagcagatcctggggttgacctttacccgcaaggct
gcggctgaacttggcgaacgtattcgccaacgtctgcaaaccctcgcgggaagcgctttc
atggaccagctgtcggctgacgatccgcggcgcgaagtgctgaagaatattgcaccggcg
gtggctacctacgattcctatgcgggggacatcgtccgcgaatacggtctgctgattccc
tcggagccagccgcccgcctcattacggacgccgaacggtggatggtggcccgcgacgtg
gtgatcaactctggtgattcgctcaccacgcagaccgccgtgtccagcgtgatcgcagac
gtgtgcgctctttcggatgagatggacaaccacctggtcggtattgcagcggtcgagcag
gaaagcgcggcagcgaagaagctcttggaagagctgcccaaggggccgcgaagcaagaaa
gaattcacggacgaaaacacgaagtttcgcgacacccagcaataccgcatcgagttgttg
aagctggtgcagaagttccgcgagaccctgcaggagcgcgacctactgactttcgggcag
cagatgagtaaagcggcgacgctcgtgcgcgaccacgaagtcgtggggcaagaccagcgc
cgccgcttccgggtggtgatgttggatgaatatcaggacaccggccacgcacagcgcgta
atgctgcgttcgttgtttggcgatgggcgagcgggcgagggaagcttttccgcaatggca
gtgggcgacccaatgcagtcgatctaccaattccgtggagcgacggcctccaacttggag
aaattccgaaccgacttccccaacgcggccggagaaccagccgagaagctgcagctgttg
acctcctggcgcaaccccaccatggtgctggacatggccaacagggtctctacgtggtcc
atggagcgcagcaccgagagtactggacgcctggtctccgagctgcgcccgcgccccgga
gccgcagaaggcgaatcggcggtggcatttttcgacgagcgggagcaggagctcgactgg
ctagccgacaagctgcaaagtcagtggcgggaccaccagcggaagttggagaccgccgac
gatcctgcgaaggttaagcccttttccgccgccgtgttggtgacggtcaacaaagacgca
gttccgatttacgagaaactggtggagcgcggcgtgcctgcggacatgacggcggggccg
ggattgctggatatccccgaggtcgcggatgtgttcgcaatgctgcgggtgctcgtagac
ccaaccgatgacgtggccctgctgcgcttattgaccggccctcgatggaacctcggagcc
gctgaccttgcagtgctcacgcgccgggcggagcagatcgccaaacgcggagccggggag
gcggacgctatcgacgactctgtaatggaacggcagcgccgggaagcaatcgagctgctc
agaacccctggagtgcgcgacgagttgatcgaggaagtgctggaggcgatcccgaacgct
acggagttctccgtagggctgatcgatgcactcgctgatctgacagacgcagaggagatg
ggcatgtcggccgaaggctctcgccgactggcacaactcggccgggagcttggatacttg
cgccgtcacagcctgggtaagaaccttccagatctggtggcagacattgagaagatgctc
ggggtgcgcacggaggtcttgacgcgctggcaccgccgccccgagcaggcgatcggcacc
agccacctggataagttcgcgcagattgtgcgggacgtttcccgcgcgggtagcgccacc
cctaaggcattggtggagtacctactagccgctcaatcggaagaagatggtctggatccg
ggtgaggtgcagcgcaaggacaatacggtccagatcctcaccgtccacaaggccaagggg
ttggagtgggacattgtcgccgtgccgcatgcctcgcgcgaacgttacggggactactcc
cagcctcgaagcgagtccgcgtggaccatcaaggcgagagtgctgccgagcagcctacgc
ggcgatgcgggcgacggcccaggggcatatccgacactggtgactgacgatgcagaagac
cgaagcggacacaccaaggcatacaaggagttcaacaaacaggtgagccgcttccgagcc
aaagagaacgaccgcctgttctacgtggccatcacccgttccgagcgagtgctcttcgtc
agcggttcggcctttaaagagtcggcaagcaagggtaacgacccatcaatctgcctcacc
ctgctgcacgaatacctggagcagagcggggttgcagccaacgtagagcattggtccggc
atgggaatgtactacaaagacttggatacgcggttagacaacccggacttgcccctagag
gacaagctcatgcttcccaccccgcagataaacggggagcggggagactacgaggaagag
cgtaaggaacgcgacacggtggcgaccgccggcgctagctggcccagcccggctcccgca
atgactcgccccggtgtggccgaaggcgccgagcaagtgcgcaaggaaatcgaagctgtc
tcccaacaggaagaacaagacggacagagccgaccagcgccaggcgccactgcggatgga
gcgccgaccacactggccgaagcctgggatctcgaaacaaacctgctacttgaggagttc
tcggcgatggacaacgccgagctagtggttccgctgaatgtccgcatgaccgccaccgag
gctgtcagcctgcgcaaggacaaccaggagttcgctctgcgcgcccgtcgcccgattccg
ttggagccgaagccctatgccaagcgcggcaccgccttccacaactgggtggaggaacgc
tacaagcaggtcagcctgctggacgaagatcagctccctggcgcctccgacgcaaccctg
gaagacccctacctcgaaacgctgaaggatgccttcctgcgctccgagtgggcagaccgc
caacccgagagcgtggaaggggcgtactctgtcaccatcggcggccacgtgttcgaaggc
cgaatcgacgcggtcttccacgacggaaccgatcccaccgccggatggatcgttgtggac
tggaagaccggacgcaaacccaccggcgcggacatggacgcagccgccatgcagctggcc
gtctaccggctcgcctgggccaaactgctcagcgcaaaactgggggtggaggtgcccgcc
gagaacgtccgggctgcgttccactatgtcgcggcaaatgaaacctatgaaccgcgtaca
ctactgtctgcagacgagctcgaagggatgcttgggggcgtcactaaaaagaccacccaa
ggcgaccacgagcagtga
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