Corynebacterium jeikeium: jk1845
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Entry
jk1845 CDS
T00255
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cjk
Corynebacterium jeikeium
Pathway
cjk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cjk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
jk1845 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjk03021
]
jk1845 (rpoC)
03400 DNA repair and recombination proteins [BR:
cjk03400
]
jk1845 (rpoC)
Enzymes [BR:
cjk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
jk1845 (rpoC)
Transcription machinery [BR:
cjk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
jk1845 (rpoC)
DNA repair and recombination proteins [BR:
cjk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
jk1845 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DDE_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
CAI38024
UniProt:
Q4JT33
LinkDB
All DBs
Position
complement(2148187..2152158)
Genome browser
AA seq
1323 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
GCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAANIITSVDEEGRHNDQSTLEAEMLLEKKEVEQERDAELADRAKTLEDD
LAELEAAGAKNDAKKKVQNAADREMRHIRERAEREIDRLDEIWNTFVKLAPKQMIVDENI
YNELVDRYEDYFTGGMGAEAIQTLIRSFDLEAEAESLREVIRDGKGQKKLRALKRLKVVA
AFLRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMLDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKLMALELFKPFVMKRLVEKSYAQNIKSAKRMVERQR
PEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPILVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTLLKKPEEFGGQ
GAYAPATEDGPAQGVYSSLAEAIMAYDRGVLGLQAPIHVRISHLRPTAEIEAELFPDGWQ
RGQTWLAETTLGRVLFNELLPWNYPYVEGVMAKKPQASVINDLAAKYPMITVAQTVDKLK
DAGFYWATRSGVTITMHDVLVLPNKQEVLDNYEAKARVIEKKMARGKINEAERYQSLVDL
WKEATDYVGQSVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVTNSRGEYITRPIK
TSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTKQGA
VVPVAVPVLDAEGKPTGNYTAADFVETSVLGRYLASDATASDGTVIVAEGDVVGEGELQA
LLEAGVEEVKVRSVMTCATNTGVCSTCYGRSMATGKKVEIGEAVGIVAAQSIGEPGTQLT
MRTFHLGGVGGDITGGLPRVQELFEARVPKAKSPIASVDGKVRIEDDDNFFTLTIEPDDG
SDDVVYEKLSKRQGLATLGTGGVERPIRDGDHVKMGQQLLKGAADPHEVLRVMGRRGVQQ
HLINEVQKVYRDQGVAIHDKHIEIIVRQMLRRVTVIDSGSTEFLPGSLVDHADAVAASKE
AVKTGGRPVEVRAEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENV
IIGKLIPAGTGISRYRNISVEPTEEARAAAYSLPSSFGDGFYADDTYGEFTGAAVPLDDI
DLM
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaactttttcgatgagcttcgcatcggcctagcgactgcggacgacatc
cgtcgctggtcccgtggcgaggtcaagaagcctgaaaccattaactaccgcaccctgaag
ccggagaaggacggcctgttctgcgaacgcattttcggccccacccgcgactgggagtgt
ggctgtggcaagtacaagcgcgtgcgctacaagggcatcatctgtgagcgctgtggcgtt
gaggtgaccaagtccaaggttcgccgtgagcgcatgggccacatcgagctggccgcgccc
gtcacccacatctggtacttcaagggcgtgccctctcgcctgggctacctgctggacctg
gctccgaaggatctggaaaagatcatctacttcgccgccaacatcatcacctctgtggac
gaggagggtcgccacaacgaccagtccaccctcgaggcggagatgctgctggagaagaag
gaagtcgagcaggagcgcgacgcggagctggctgaccgtgccaagactctcgaggacgac
ctggcggagctcgaggcagctggtgccaagaacgacgccaagaagaaggtccagaacgca
gccgaccgcgaaatgcgccacatccgcgagcgcgccgagcgcgagattgaccgcctggac
gagatctggaacaccttcgtcaagctggctccgaagcagatgatcgtggatgagaacatc
tacaacgagctggtcgaccgctacgaggattacttcaccggcggcatgggcgcagaggct
atccagactctgatccgtagcttcgacctcgaggccgaggccgagtccctgcgcgaggtc
atccgcgacggcaagggccagaagaagctgcgtgctctgaagcgcctgaaggtcgtcgcc
gcattcctgcgttccggtaacgacccggcaggcatggttctggactgcatcccggtaatc
ccgccggagctgcgtccgatggtgcagctggacggcggccgctttgcgacctccgacctg
aacgacctgtaccgccgcgtaatcaaccgcaacaaccgcctgaagcgcatgctggatctc
ggcgcgcctgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtcgacgca
ctgttcgacaacggtcgtcgcggccgtccggttaccggcccgggcaaccgtccgctgaag
tccctgtctgacctgctgaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgtgtggactactccggccgttccgtgattatcgtcggtccgcagctgaagctgcatcag
tgtggtctgccgaagctgatggccctggagctgttcaagcctttcgtgatgaagcgcctg
gtggagaagtcctacgcgcagaacatcaagtccgccaagcgcatggtggagcgtcaacgc
cccgaggtgtgggacgtgctggaagaggccatcgccgagcacccggtgatgctgaaccgt
gcacccaccctgcaccgcctgggtattcaggccttcgagccgatcctggttgagggtaag
gccatccagctgcacccgctggcctgtgaggccttcaacgcggacttcgacggtgaccag
atggctgttcacctaccgctgtccgcagaggcacaggccgaggctcgtatcctgatgctg
gcttccaacaacattctgtctccggcatccggtaagccgctggctatgccgcgtctggac
atggtgaccggcctgtactacctgaccctgctgaagaagccggaggagttcggcggccag
ggcgcctacgcaccggccaccgaggacggtccggcacagggcgtgtactcctccctggcc
gaggcgatcatggcttatgaccgtggcgtgctgggcctgcaggctccgatccacgtgcgt
atcagccacctgcgcccgaccgcggagatcgaggccgaactgttcccggatggttggcag
cgaggccagacctggctggcggaaaccaccctgggtcgcgtgctgttcaacgagctgctg
ccgtggaactacccatacgtagagggcgtcatggcgaagaagccacaggcttccgtcatt
aacgatctcgcggcgaagtacccgatgatcaccgtggcgcagacggtggacaagctgaag
gatgccggcttctactgggcaacccgctccggtgtgaccatcaccatgcacgacgtgctg
gttctgccgaacaagcaggaagtcctggataactacgaggccaaggcccgcgttatcgag
aagaagatggcacgcggcaagatcaacgaggccgagcgttaccagtccctggttgacctg
tggaaggaagccaccgactacgtcggtcagtccgtcgaggacctgtacccggatgacaac
ccgattccgatgatcgtgaagtcgggtgctgccggtaacatgcgtcagatctggaccctg
gccggcatgaagggcatggttacgaactcgcgcggtgagtacatcacccgtccgattaag
acctccttccgcgagggcctgtccgtgctcgagtacttcaacaactcccacggttcccgt
aagggcctggccgatacggcactgcgtaccgccgactcgggttacctgacccgtcgtctg
gtggacgtggcgcaggacgtcatcgtgcgcgaggacgactgtggcaccaagcagggcgct
gttgtgccggtggccgttccggttctggacgccgagggtaagccgaccggtaactacacc
gcggcggacttcgtcgaaacgtctgttctgggtcgttacctggctagtgacgccaccgcc
tccgacggcaccgttatcgtcgccgagggcgatgtcgttggcgagggcgagctgcaggct
ctcctcgaggccggcgtggaggaagtaaaggtccgctccgtgatgacctgtgctaccaac
accggcgtgtgctccacctgctacggccgttccatggcgaccggcaagaaggtggagatc
ggcgaggccgttggtatcgtcgcggcccagtccattggtgagccgggtacccagctgacg
atgcgtacgttccacctgggtggtgtcggtggcgacattaccggtggtctgccgcgtgtt
caggagctgttcgaggctcgcgtgccgaaggcgaagtccccgattgcgtcggtggacggc
aaggtgcgcatcgaggacgacgacaacttcttcaccctgaccatcgagccggacgacggc
tccgacgatgtggtctacgagaagctctccaagcgccagggcctggcaacgctgggcacc
ggtggcgtggagcgcccgatccgcgacggcgaccacgtgaagatgggccagcagctgcta
aagggcgctgccgacccgcacgaggttctgcgtgtgatgggccgccgtggcgtgcagcag
cacctgatcaacgaggtgcagaaggtctaccgcgatcagggtgtggccatccacgacaag
cacatcgagatcatcgtgcgccagatgctgcgccgcgtgaccgtcatcgactccggctcg
accgagttcctgccgggctctctggtggaccacgcagatgcagtggctgcttccaaggag
gccgtcaagaccggcggccgtccggtagaggttcgcgccgagatcatgggtatcacgaag
gcctccctggctaccgagtcctggctgtccgccgcctcgttccaggagaccactcgcgtg
ctcacggacgctgctatcaacaagcgttctgacaagctgatcggcctgaaggagaacgtg
atcatcggtaagctgatcccggccggtacgggtatttcccgctaccgcaacatcagcgtg
gagccgacggaggaggctcgcgcagcggcttactccctgccgtcctccttcggtgatggc
ttctacgccgacgacacttacggcgagttcaccggcgctgccgtgccgttggacgacatt
gatctgatgtag
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