Campylobacter jejuni subsp. jejuni M1: CJM1_0466
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Entry
CJM1_0466 CDS
T01855
Symbol
rpoBC
Name
(GenBank) Bifunctional DNA-directed RNA polymerase subunit beta-beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cjm
Campylobacter jejuni subsp. jejuni M1
Pathway
cjm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cjm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJM1_0466 (rpoBC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjm03021
]
CJM1_0466 (rpoBC)
03400 DNA repair and recombination proteins [BR:
cjm03400
]
CJM1_0466 (rpoBC)
Enzymes [BR:
cjm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CJM1_0466 (rpoBC)
Transcription machinery [BR:
cjm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CJM1_0466 (rpoBC)
DNA repair and recombination proteins [BR:
cjm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CJM1_0466 (rpoBC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
DUF6675
Motif
Other DBs
NCBI-ProteinID:
ADN90681
LinkDB
All DBs
Position
442354..446907
Genome browser
AA seq
1517 aa
AA seq
DB search
MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGVKMKDLERVLYYEAYIVENPGDAFYDNESTKKVEYCDVLNEEQYQNLMQR
YENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMAATNSEAKKKTIIKRLKVVENFLNS
NLNANADSDEAVPNRPEWMMITNLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNTR
LKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRF
RQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELFKPHLLAKLEEKGYATTVKQAK
KMIENKTNEVWECLEEVVKGHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFN
ADFDGDQMAVHVPLSQEAIAECKVLMLSSMNILLPASGKSVTVPSQDMVLGIYYLSLEKA
GAKGSHKICTGIDEVMMALESKCLDIHASIQTMVDGRKITTTAGRLIIKSILPDFVPENS
WNKVLKKKDIAALVDYVYKQGGLEITASFLDRLKNLGFEYATKAGISISIADIIVPNDKQ
KAIDEAKKQVREIQNSYNLGLITSGERYNKIIDIWKSTNNVLSKEMMKLVEKDKEGFNSI
YMMADSGARGSAAQISQLAAMRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKG
LADTALKTANAGYLTRKLIDVAQNVKITIEDCGTHEGVEINEITADSSIIETLEERILGR
VLAEDVIDPITNSVLFAEGTLMDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGIN
LGEGKLVKPGEAVGIISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYN
LKTYKNKEGKNIVANRRNAAILLVEPKIKTPFKGVINIENIHEDVIVSIKNKKQEVKYIL
RKYDLAKPNELAGVSGSIDGKLYLPYQSGMQVEENESIVEVIKEGWNVPNRIPFASEILV
EDGEPVVQNIKAGEKGTLKFYILKGDGLDRVKNVKKGDIVKEKGFFVVIADENDREAKRH
YIPRESKIEFNDSEKIDDANTIIASAPKKERKVIAEWDAYNNTIIAEIDGVVSFEDIEAG
YSADEQIDEATGKRSLVINEYLPSGVRPTLVIAGKGDKAVRYQLEPKTVIFVHDGDKIAQ
ADILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
QAEDGTSAEYLIDKSKHIQVRDGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISEIQ
QVYRGQGVVISDKHIEVIVSQMLRQVKVVDSGHTKFIEGDLVSRRKFREENERIIRMGGE
PAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVILGRMIP
VGTGLYGEQNLKLKEQE
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatttaaagtaatagaaatcaaagaagatgcaagacctagggatttcgaagcg
tttcaactaagacttgcaagtcctgaaaaaatcaaatcatggtcttatggagaagtaaaa
aaaccagaaactatcaattatagaaccttaaagcctgaaagagatgggcttttttgtgca
aagatttttggacctataagagattatgaatgtctttgtggcaagtataaaaaaatgcgt
tttaaaggtgttaagtgcgaaaaatgtggcgttgaagtagcaaattcaaaagtgcgtcgt
tctagaatgggacatatcgagcttgtaactcctgtggctcatatttggtatgttaattct
cttccaagtcgtataggaacgcttttgggtgttaagatgaaagatcttgagcgtgtgctt
tattatgaagcttatatcgttgaaaacccaggtgatgctttctatgataatgaaagcacc
aaaaaagtagaatattgtgatgttttaaacgaagagcaatatcaaaatttaatgcaacgc
tatgaaaatagtggctttaaagcaagaatgggtggagaagttgttcgtgatttacttgca
aatttagatcttgtagcacttttaaatcagcttaaagaagaaatggcggctacaaattca
gaggctaagaaaaaaactatcattaaacgcttaaaagttgtagaaaatttcttaaattca
aatttaaacgccaatgccgatagcgatgaagccgtaccaaatcgtcctgaatggatgatg
attacaaatcttccagttttaccgccagatttgcgtcctttagtggctttagatggtgga
aaatttgcagtttctgatgtgaatgacttatatcgtcgcgttatcaatagaaatacacgt
cttaaaaaacttatggaacttgatgcaccggaaatcattataagaaatgaaaaaagaatg
cttcaagaggctgttgatgcactttttgacaacggtcgtcgtgctaatgctgtaaaggga
gcaaataaacgcccattgaaatctttaagtgaaattattaaaggtaaacagggacgtttc
agacaaaacttattaggtaagagggtggatttctcaggtcgtagcgttattgttgtgggt
ccaaaacttagaatggatcaatgtggtttgcctaaaaaaatggctttagaactttttaaa
ccacatcttttagctaaacttgaagaaaaaggttatgcaaccacagtaaaacaagctaaa
aaaatgatagaaaataaaactaatgaagtttgggaatgtttagaagaagtggtaaaaggg
catcctgttatgctaaaccgtgcacctactttacataaactttctattcaagcttttcat
cctgttttggtggaaggtaaggctatacaacttcatcctttagtttgtgcagcatttaat
gcagactttgatggggatcaaatggcagtgcatgtaccgctttctcaagaggctattgca
gaatgtaaagtgcttatgctttcatcaatgaatattcttttgccagcaagcggtaagtct
gtaaccgttccatcgcaagatatggttttaggaatttattatctttcattagaaaaagca
ggtgctaaaggttcgcataaaatttgtacaggcattgatgaagtgatgatggcacttgaa
agtaagtgtttagatattcatgcgagtatacaaaccatggtagatggtagaaagattacc
actacagcaggaagattgattattaaatccattttacctgattttgtgcctgaaaatagc
tggaataaagtcttaaagaaaaaagacattgccgcgcttgtggattatgtttataaacaa
ggtggtttggagattacagcaagtttcttagatagactcaaaaatttaggttttgagtat
gcaactaaagcaggtatttcaatttcaattgcagatattattgttcctaatgacaagcaa
aaagctatagatgaagcaaaaaaacaagtaagagaaattcaaaattcttataatcttggt
ttgattacttcaggggaaagatacaacaaaatcatcgatatttggaagagtacaaataat
gtcctttcaaaagagatgatgaagcttgtagaaaaagataaagaaggttttaactctatt
tatatgatggcagattctggtgctaggggtagtgcggctcaaatttctcagcttgctgcg
atgagaggacttatgactaaacctgatggttctattatcgaaactcctattatttcgaat
ttccgtgaagggttgaatgttcttgaatactttatttcaactcacggtgctagaaaaggt
ctagcagataccgctcttaaaacagcaaatgcgggttatttgacaagaaaactcatcgat
gttgcgcaaaatgtaaaaattaccattgaagattgtggaacgcatgagggtgttgaaatc
aatgaaattaccgcagatagctctattatagaaactttagaagaaagaattttaggcagg
gttttagctgaagatgtgattgatcctattacaaattctgtgctttttgcagaaggtact
ttaatggatgaggaaaaagcaaaaattcttggagaaagcggtataaaaagtgtcaatatc
cgcactcctattacctgcaaagctaaaaaaggaatttgtgcaaaatgttatggtatcaat
cttggtgaaggtaaattggtaaaaccaggcgaagcagtaggaattatttccgctcaatct
atcggtgaaccaggaacgcagctaactctaagaactttccacagtgggggaactgcaagt
acggatttacaagatagacaagtaagcgcacaaaaagaaggttttatcagattttataat
cttaaaacttataaaaataaagaaggtaaaaatatcgtagcaaatcgtagaaatgcggca
attttacttgtggagccaaaaatcaaaactccatttaaaggtgtgattaatatagaaaat
attcatgaagatgtgattgtttctattaaaaataaaaaacaagaagtaaaatacatacta
agaaaatacgatcttgctaaaccaaatgaattagcaggtgtaagtggcagtatagatgga
aaactttatttgccatatcaaagtggtatgcaagtagaagaaaatgaaagtatcgtagaa
gtgattaaagagggttggaatgtaccaaatcgtatcccttttgcgagtgaaattttagta
gaagatggtgagcctgtagttcaaaatatcaaagcaggcgaaaaaggaacgcttaaattt
tatatccttaaaggcgatggtttagatagggtaaaaaatgttaaaaaaggcgatattgtt
aaagaaaaaggattctttgtagtgattgctgatgaaaatgatagagaagcaaaaagacac
tatattccaagagaatctaagatagaatttaacgatagtgaaaaaatcgatgatgcaaat
actatcattgcaagtgctcctaaaaaagaaagaaaagtgattgcagaatgggatgcttat
aataatactatcattgcagaaattgatggtgttgtaagctttgaggatattgaagcaggt
tatagtgctgatgagcaaattgatgaagctacaggtaagcgttctttagtgattaatgag
tatttgccaagcggagttagaccaactttggtaatcgcaggaaaaggtgataaggctgtg
cgttatcagcttgaaccaaaaaccgttatttttgttcatgatggtgataaaatcgctcaa
gcagatattttagcaaaaactccaaaagctgcagctaaatcaaaagatattacaggaggt
cttccaagagtttctgaactttttgaagcaagaaaaccaaaaaatgcggctgtgattgca
gaaattgatggtgttgttcgttttgataaacctttgcgttctaaagaaagaatcattatc
caagcagaagatggaacaagcgctgagtatttaatcgataaatcaaaacatattcaagta
agagatggcgagtttatccatgcaggtgaaaaacttacagatggagttgtttcaagtcat
gatgtgcttaaaattttgggtgaaaaagccttgcattattatttgatttctgaaattcaa
caagtttatcgcggacaaggtgttgtgatttctgataaacatatagaagttatcgtttct
caaatgctaagacaagtaaaagttgtagatagtggacatacgaaatttatcgagggtgat
ttggtttcaagacgtaaattccgtgaagaaaacgaaagaatcattagaatgggtggagaa
cctgctattgctgagcctgtgcttttgggtgtaacaagagcagcgattggaagcgatagt
gtgatttctgcagcttcattccaagaaactactaaagttctaaccgaagcaagtatagcg
ggtaaatttgactacttagaagatttaaaagaaaatgttattctaggtagaatgatacct
gttggaacagggctttatggtgaacaaaatttaaaacttaaagaacaagaataa
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integrated database retrieval system
