Campylobacter jejuni subsp. jejuni M1: CJM1_0974
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Entry
CJM1_0974 CDS
T01855
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cjm
Campylobacter jejuni subsp. jejuni M1
Pathway
cjm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cjm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CJM1_0974 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjm03021
]
CJM1_0974 (rpoD)
Transcription machinery [BR:
cjm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CJM1_0974 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_ner
Sigma70_r4_2
MCR_beta_N
Motif
Other DBs
NCBI-ProteinID:
ADN91170
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Position
939580..941448
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AA seq
622 aa
AA seq
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MNAKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTAKKVQALMKKHKVQLFSAAEI
AQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRSDSPDRMYLREMGQIALLN
KDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSFDDEEKSD
DKLDELDIDEDEENETELESDEENTKKNSKKEDERTLKVIEKFKALEKAKKDWLKTSKDK
ESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEIVKSMETALKSDEEFDKELKRLEYR
LPMFSDELKKRHADILKDITKLSKEEITERALETTMVSTYMEIKKLFQTKEASEKSFDLE
KSRLKEILEQIKRGKKISDEAKGRMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMK
AVDKFEYKRGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINQINKIIREHLQKD
GKEPDVSVIAKEVGLSVDKVKQVIKITKEPISLEAPIGNEDDGKFGDFVEDRNSLSPMDH
ILKDDLKEQIDEVLDQLNDREKAVIRMRFGLMDDESDRTLEEIGKELNVTRERVRQIESS
AIKKLKHPKVGRKLKNYIEGWK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaaaactcaagaagctgaattagaagaattatttcaagaaaatgcaaaagat
tatatcacatatgaaaaattggtaaaatatcttacaaaacaaccaagtgcatcaaccgct
aaaaaagtgcaagcattaatgaaaaaacacaaagtacaacttttttcagcagccgaaatt
gcacaaatgaaaaacatagaagatgcaaaaagacttcaagaagaaaaacaaaaactccaa
gatacaagccttgagaacgaatttgatttagccaatgaaaacgatttattagaatggagc
agatcagactctcctgatcgtatgtatttaagagaaatgggacaaattgctttattaaac
aaagatgaagaaattgaaatttccaaaaaaatagaacttggcgaagatattatcattgat
gctttttgttctgtgccttatttgatagattttattttagattataaagaacctttaata
aacagagaaagaagggtaaaagaactatttaaaagctttgacgatgaagaaaaaagtgat
gataaacttgatgaacttgatatagatgaagatgaagaaaacgaaacagaattagaatca
gatgaagaaaatactaaaaaaaacagcaaaaaagaagatgaaagaactttaaaagttata
gaaaaatttaaagctctagaaaaagctaaaaaagattggttaaaaacatccaaagacaaa
gaaagtggagatgagcttttagataaattaagcattgcgttcaaaaaaaatattttaaaa
gaaaaattaatggatctaggccctacttcaaaacttattagtgaaatcgtaaaatcaatg
gaaactgcactaaaaagcgatgaagaatttgacaaagaacttaagcgtttagaataccgc
ttacctatgttttctgatgaacttaaaaaacgccatgcagatattttaaaagatattaca
aaattgagcaaagaagaaatcacagagcgagctttagaaacaaccatggtaagcacttat
atggaaattaaaaaactatttcaaactaaagaagctagtgaaaaaagctttgatcttgaa
aaatcacgtttaaaagaaattttagagcaaattaaacgcggtaaaaaaatctctgatgaa
gcaaaaggaagaatggcaaaatcaaacttgcgtcttgttgtaagcatagctaaacgctac
acaaatcgtggtctacctttcttagatcttattcaagaaggaaatataggtttaatgaaa
gctgtggataagtttgaatacaaaaggggttataaattttccacttatgcaacttggtgg
atcaggcaagctatttcaagggctatagctgaccaagcaagaaccataagaattccaatc
cacatgatagaaaccatcaatcaaattaacaaaattatccgcgaacatctacaaaaagat
ggaaaagaacctgatgtcagtgttatagctaaagaagtaggtttaagcgtagataaggtt
aaacaagttattaaaatcacaaaagaaccaatttctcttgaagctccaataggaaatgaa
gatgatggtaaatttggagattttgttgaagatagaaattcactttctccaatggatcat
atcttaaaggatgatttaaaagaacaaattgatgaagttttagatcaattaaacgataga
gaaaaagcggtaattcgtatgcgttttggtttaatggatgatgaaagtgatagaacttta
gaggaaattggaaaagagcttaatgtcactcgagaaagagtgagacaaatagaaagttca
gctataaaaaaactcaaacaccctaaagtaggaagaaaactaaaaaattatattgaaggt
tggaagtaa
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