Campylobacter jejuni subsp. jejuni M1: CJM1_1190
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Entry
CJM1_1190 CDS
T01855
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cjm
Campylobacter jejuni subsp. jejuni M1
Pathway
cjm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJM1_1190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjm03019
]
CJM1_1190
Messenger RNA biogenesis [BR:
cjm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CJM1_1190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_2
DUF3450
dUTPase
KH_KhpA-B
MurD-like_N
DUF4945
MS_channel_1st_1
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ADN91384
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Position
1152584..1154137
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AA seq
517 aa
AA seq
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MIESLIALIAAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAIEYEAELILKDAKNSIL
NAELEVKKKYEEKTHKIQKDFNQKFDDLSKKEQKLQQEEEKLKEDKEYLCKSQKHIQDLQ
SDVDKLKNKYQEKLDDVLKILEHSTGLTQNEAKEIILKKVEENSREQIAHIVRKYEEEAK
NEAKRKANFIIAQATSRFAGEFAAERLINVINIKNDELKGRIIGKEGRNVKTLEMVLGVD
IIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRIQPARIEEIHEKVCKEFDSAILEEG
ETIVMDLGLNKIHPEIVKLIGKLKYRASYGQNALAHSLEVAHLAGIIAAECGGDENLARR
AGILHDIGKALTHDFEGSHVDLGAELCKRYKEHPVVINAIYAHHGHEEATSIESAAVCAA
DTLSAARPGARREVLEAFLKRVSELEDIAKSKEGIKNAYAINAGREIRVIANAQLVNDDE
SVLLAKEIAAEIQEKMQYPGEIKVNVIRELRAVEYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatcacttatcgcacttatagccgctatagtcggactcggtataggatattta
gttgcaaaaaaaatcaatgatgccaaatatgaaattttcgtagaacaagctaaagccaaa
gccaaagctatagaatacgaagcggagcttattttaaaagatgcaaaaaattcaattctt
aatgcagaattagaagttaaaaaaaaatacgaagaaaaaactcacaaaattcaaaaagat
tttaatcaaaaatttgatgatctttctaaaaaagaacaaaaacttcagcaagaagaagaa
aaactaaaagaagataaagaatacctttgcaagtcacaaaaacacattcaagacttacaa
tctgatgttgataaattaaaaaataaatatcaagaaaaacttgacgatgttttaaaaatt
ttagaacattctacaggacttacgcaaaatgaagccaaagaaatcattcttaaaaaagta
gaagaaaattctcgcgagcaaattgcacatatagtaagaaaatatgaagaagaagcaaaa
aatgaagccaaaagaaaagctaacttcatcattgctcaagctacttctcgttttgcaggt
gaatttgcagctgaaagacttatcaatgttattaacattaaaaacgatgaacttaaagga
cgtatcattggtaaagaagggcgcaatgttaaaaccttagaaatggttttaggtgttgat
attatcatcgatgatacaccaggtgctattatagtaagttgttttaatctttatcgccgt
gctattgctacaaaagttatagaacttttagttgaagatggcagaattcaacccgcgcgc
atagaagaaattcacgaaaaagtgtgtaaagaatttgatagtgctattctagaagaaggc
gaaaccatagttatggatctaggtttaaataaaatacaccctgaaattgtaaaactcata
ggaaaactcaaataccgagcaagctatggacaaaacgctttagcacattctttggaagtg
gctcaccttgcaggaatcattgctgctgagtgtggtggggatgagaatttagcacgtcgt
gcgggaattttacatgatataggaaaagcattaacccacgattttgaaggatctcatgtg
gatttaggtgcagaactttgcaaacgctataaagagcatcctgtagtaatcaatgctatt
tacgcacatcatggacacgaagaagctacaagcatagaatcagcagctgtttgtgcagca
gatactttaagtgctgcacgacctggagctagaagagaagtattagaagctttcttaaaa
agagtcagtgagctagaagatatcgctaaaagtaaagaaggaattaaaaatgcctatgca
atcaatgccggaagagaaattcgcgtcatagccaatgctcagcttgttaatgatgatgaa
agtgtacttttggctaaggaaatagcagctgaaattcaagaaaaaatgcaatatcctggt
gaaattaaagtcaatgttatacgtgaacttagagctgtagaatacgctaaataa
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