Campylobacter jejuni subsp. jejuni ICDCCJ07001: ICDCCJ07001_1113
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Entry
ICDCCJ07001_1113 CDS
T01372
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cjn
Campylobacter jejuni subsp. jejuni ICDCCJ07001
Pathway
cjn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ICDCCJ07001_1113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjn03021
]
ICDCCJ07001_1113
03019 Messenger RNA biogenesis [BR:
cjn03019
]
ICDCCJ07001_1113
Transcription machinery [BR:
cjn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ICDCCJ07001_1113
Messenger RNA biogenesis [BR:
cjn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ICDCCJ07001_1113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Spore_III_AA
AAA
ATPase_2
OB_RNB
OB_RNR_1st
Mor
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADT66443
LinkDB
All DBs
Position
1129186..1130484
Genome browser
AA seq
432 aa
AA seq
DB search
MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPREFRRQELIFEILKAQT
KKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQIRKFALRVGDIVTGQVRE
PKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTEKIKLEYDAMKLTGRVLDLFT
PIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEMHLIVLLVDERPEEVTDMQRCVKGE
VFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVIILLDSITRLARAYNTATPSSGKVLS
GGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEEFKGTGNSEIVLD
RNIADRRIYPAINIIKSGTRKEELLQGVANLQKIWAIRSAISQMDDVEALKFLYSKMLKT
KDNVELLSIMNE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaaaaaaacaacatcaaagaacccacgttccagtggaaggttataaaatc
gaagaattaaaattattagatctagaaaatctagttaaaatcgctaatgaatgtgaaatc
gaaaatccaagagaatttcgccgccaagaacttatttttgaaattttaaaagcacaaaca
aaaaaaggcggtttcatactttttacagggattttagaaatttcttctgaaggttatggc
tttttaagaggcatggactccaatcttagcgatagtgttaatgacgcttatgtttcaaat
tcacaaattagaaaatttgctctgcgtgtaggcgatatcgttacaggacaggtaagagaa
ccaaaagatcaagaaaaatactacgctcttttaaaaatcgaagcgatcaattatctacct
ttgcaagaagccaaagaaagacctttatttgataacttaacccctatttttccaacagaa
aaaatcaaactcgaatacgatgctatgaagcttacgggtcgtgttttggatctttttact
cctataggaaaaggacaacgcggactcatcgttgctccaccacgcacaggtaaaacagaa
cttatgaaagaacttgctactgctattgcaaaaaaccacccagaaatgcatttaatcgtg
cttttagtcgatgaaagacctgaagaagttactgatatgcaaagatgcgtaaaaggcgaa
gtttttagttctacttttgatttacctgcttataatcatgtgcgtgtagctgaactcgtg
atagaaaaagccaaaagaatggtagaaacaggaaaagatgttattatcctgcttgatagt
atcacaagactggcgcgtgcttacaacaccgcaactccaagcagtggaaaagtcctaagc
ggcggagtagatgctaatgccctacacaaaccaaaacgcttctttggtgcagctagaaat
atagaaaatggaggctctttaaccatagttgctacggctttaattgacacaggttcaagg
atggatgatgtgatttttgaagaatttaaaggcacaggaaatagcgaaatagttcttgat
agaaatatcgccgatagaagaatttatcctgcgattaatatcatcaaatcaggaacaaga
aaagaagaattactccaaggcgtagcaaatcttcaaaaaatttgggcgatccgttcggcg
atttctcaaatggatgatgttgaggcattgaaatttttatattctaaaatgcttaaaacc
aaagacaatgtagaacttttatctataatgaacgagtag
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