Coturnix japonica (Japanese quail): 107306014
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Entry
107306014 CDS
T04297
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03420
Nucleotide excision repair
cjo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107306014 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
107306014 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107306014 (ERCC8)
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107306014 (ERCC8)
Ubiquitin system [BR:
cjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107306014 (ERCC8)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
107306014 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WDR55
WD_LRWD1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
107306014
NCBI-ProteinID:
XP_015704251
UniProt:
A0A8C2SNV2
LinkDB
All DBs
Position
Z:complement(20300007..20323666)
Genome browser
AA seq
415 aa
AA seq
DB search
MLGFISARQAGLDDPLRLRRAESTRRVLSLELNKDRDVERIHGSGINTLDIEPVEGRYML
SGGSDGVIVLYDLENLSRKPNYTCKALCSVGRSHPDAHKFSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADVFQFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSCSH
ILQGHRQEVLAVSWSPRHEYILATASADSKVKLWDVRRASGCLTTLDQHNGEKSKASSEA
VNTAHNGRVNGLCYTSDGLHLLTVGTDDRMRLWNSSTGENTLVNYGKVSNESRKGLKFSV
SCGCSPEFAFVPCKSTIAVYTIFSGELITMLRGHYNTVDCCVFQPNFQSEDGVCLSLEQL
RIITELYSGSRDCNILAWIPALREPVLDDVSDKSLRRQHINPAYEDAWSSSDDED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttggggtttatttcggctcgtcaggccgggctcgacgatccgttgcggctgcgccgg
gctgagtccacccgcagggttttaagtttagaattaaataaagatagagatgtggaaaga
atacatggcagtggtattaacacccttgatattgagcctgttgagggaagatacatgtta
tcaggtggctcagatggtgttattgttctttatgaccttgaaaatctgagcagaaaacca
aattacacatgtaaagcactttgttcagtgggaaggagccatcctgatgcacataaattc
agtgtggagacagtccagtggtatcctcatgatactggcatgtttacatcgagctcattt
gataaaaccctgaaaatatgggatactaatactttacaacctgcagatgtatttcaattt
gagggaacagtctatagccatcacatgtctccagttgctacaaaacattgtttaatagca
gttggtaccaaaagccccaaagtacagctctgtgacttgaagtctggatcctgttctcac
attctgcagggtcacaggcaagaagtactggcagtatcttggtccccacgtcatgaatat
attttggcaacagcaagtgctgacagtaaagtaaaattatgggatgtgagaagagcgtct
ggatgtctgactacacttgatcagcacaatggagaaaagtccaaagcatcttctgaggca
gtaaacacagctcacaatgggagagttaatggtttgtgctatacaagtgatggtcttcat
ctgttgactgttggtacagatgatcggatgagactctggaacagctccactggagaaaat
acattggtgaactatggcaaagtcagtaatgaaagtagaaaaggactcaaattcagcgta
tcctgtggctgtagtccagagtttgcctttgtcccatgtaaaagtaccattgctgtttat
acaattttctcaggagaactgataactatgcttcgaggtcattataatactgttgactgc
tgtgtatttcaacctaactttcagagtgaagatggcgtttgtctttctttggaacagctc
agaataatcacagaactttacagtggtagcagggattgcaatatccttgcctggatacca
gctcttcgagaaccagttcttgatgatgtttcggataagtctctccgtcggcagcacata
aatccagcgtatgaagatgcgtggagcagcagtgatgacgaagactga
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