Coturnix japonica (Japanese quail): 107306375
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Entry
107306375 CDS
T04297
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107306375 (CHD1)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107306375 (CHD1)
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
107306375 (CHD1)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
107306375 (CHD1)
SLIK complex
107306375 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
CHDCT2
Motif
Other DBs
NCBI-GeneID:
107306375
NCBI-ProteinID:
XP_015704966
LinkDB
All DBs
Position
Z:45465638..45516376
Genome browser
AA seq
1807 aa
AA seq
DB search
MNGHSDEESARNSSGESSRSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSESGSESGS
QSESESDTSREKKQVQAKPPKADGAEFWKSSPSILAVQRSAVLKKQQQQQKAASSDSGSE
EDSSSSEDSADDSSSETKKKKHKDEDWQMSGSGSVSGTGSDSESEEDGDKSSCEESESDY
EPKNKVKSRKPPSRIKPKSGKKSTGQKKRQLDSSEEDDDDEDYDKRGSRRQATVNVSYKE
AEETKTDSDDLLEVCGEDVPQTEEDEFETIEKFMDSRVGRKGATGASTTIYAVEADGDPN
AGFEKSKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLK
NASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE
DGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDY
QLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTS
WQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLG
GLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEK
FSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQ
YYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLI
RSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRK
QALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK
KQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEE
LSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANF
SNMDEDDIELEPERNSRNWEEIIPESQRRRIEEEERQKELEEIYMLPRMRNCAKQISFNG
SEGRRSRSRRYSGSDSDSITERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGP
LERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGQERAGGRLGKVKGPTFRI
SGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLVG
IYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQR
LAGAGNSKRRKTRSKKNKMKATKIKEEVKSDSSPQLSEKSDEDDDEEDNKDEIVSVKHLH
KKLKTEKENEDKPEPDIGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKEKDNKEKR
ENKVKESTQKEKEVKEEKVNEIKSENKEKSKKIPLLDTPVHITATSEPVPISEESEELDQ
KTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQI
KQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNAHVIRNPDVER
LKETTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKDHRDWD
HYKQDSRYYSDSKHRKLDDHRSRDHRSNLEGNLKDSRGHSDHRSHSDHRIHSDHRSTSEY
SHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSTDHKSTPEH
TWSSRKT
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagtgcaagaaacagcagtggagagtcaagcagatca
gatgatgattctgggtcagcttcaggttctggatctggttcaagctctggaagcagtagc
gatggaagtagcagccagtcaggtagcagtgactctgaatctggttcagagtcaggcagt
caatccgaatcggaatctgacacgtctagagaaaagaagcaagttcaagctaaacctcca
aaagctgacggagctgagttttggaagtccagtccaagtatacttgctgtacagagatca
gcagtgctcaagaagcaacagcaacagcaaaaggcagcatcttcagacagtggttcggaa
gaggactcatccagtagtgaagattctgccgatgattcatccagtgaaaccaagaagaaa
aagcataaagatgaagactggcaaatgtcagggtcagggtcagtgtcgggaacaggttct
gattctgaatcggaggaagatggggataaaagcagttgtgaagaaagtgaatctgactat
gagccaaaaaacaaagtcaaaagccgtaaacctccaagcagaattaagccaaaaagtggg
aaaaagagcacaggacagaagaagaggcaacttgattcatcagaggaggatgatgatgat
gaagattatgataagagaggatctcgtcgccaggctacagtaaatgttagttacaaagaa
gctgaagaaaccaagacagattctgatgatttgctggaagtttgcggagaagatgtccca
cagactgaagaagatgaatttgaaactatagagaagttcatggacagtcgagtgggccga
aaaggagccactggtgcctcaaccaccatctatgccgttgaggcagatggtgacccaaat
gctgggtttgaaaagtcaaaggagcctggagaaatacaatatcttattaaatggaaaggc
tggtcacacatccataacacttgggaaactgaagaaacactgaagcaacaaaatgttaaa
ggaatgaagaaactggacaactacaagaaaaaggatcaggagacaaaaagatggctgaaa
aatgcttctccagaagatgtagaatattataactgccagcaagagcttacagatgatctg
cataaacaatatcaaatcgtggaaagaataattgctcattcaaatcagaagtcagcagct
ggttatccagactactattgcaaatggcaaggtctaccttattcagaatgtagctgggaa
gatggtgctctcattgccaaaaagtttcaggcacgcattgatgagtattttagcagaaat
caatctaagaccactccctttaaggactgcaaggttctaaaacagagaccaagatttgtt
gcactgaagaagcaaccatcttacattggaggacatgaaggtttggagttaagagattat
cagttaaatggattgaactggcttgctcattcgtggtgcaaagggaatagttgtattctt
gcagatgaaatgggtctgggtaaaacaatacaaacaatttcttttctgaactacctgttt
catgaacatcaattgtatgggccttttctgctggtcgtgccactttctaccttgacatct
tggcaaagagagattcaaacttgggctcctcagatgaatgctgtagtttacttaggggat
ataactagtagaaatatgataaggactcatgaatggatgcatccacagactaaacgattg
aagtttaacatacttctgacaacatatgaaattttactgaaggataagtcattccttggt
ggtctcaattgggcattcataggagttgatgaagctcatcgtttaaaaaatgacgactct
cttctgtacaagactttaatagactttaagtccaaccatcgacttcttattactggaacc
cctttgcaaaactccctcaaagagctgtggtctttgttgcatttcatcatgccagaaaaa
ttttcctcctgggaagattttgaagaggagcatggcaaaggaagagagtatggttatgca
agtcttcacaaagagcttgaaccatttttactaagaagagttaaaaaagatgtagaaaag
tctttacctgctaaggttgagcaaattctgaggatggaaatgagtgcattgcagaagcaa
tattacaagtggattttaacaagaaattataaagccctcagtaaaggttcaaaaggcagt
acctcaggctttctgaacattatgatggaacttaagaagtgttgtaaccattgctacctc
attaaaccaccagatgataatgaattctataataaacaggaggccttacagcatttgata
cgtagcagcgggaaactgatccttcttgacaagttactgattcgtctgcgagaacgtggc
aacagagttctgattttctctcagatggtgaggatgctggacatcctagcagaatatcta
aagtatcgccagtttcccttccagagacttgatggatcaataaaaggggaactgaggaaa
caagcactggatcatttcaatgcagaaggatcagaggatttctgttttttactgtctacc
agagctggaggattaggtattaacttggcatctgctgacactgtagttatatttgactct
gactggaatccacagaacgatctgcaggcacaggcgagagctcatagaattggacagaag
aaacaggttaatatttatcggctagtcacgaaaggatcagtagaagaagatattcttgaa
agagccaagaaaaagatggtgctagaccatttagtaattcagagaatggacacaacagga
aaaactgttctgcatacaggttctactccatcaagctctacaccttttaataaggaagag
ttatcagcaattttgaaatttggtgcagaggaactttttaaagaacctgaaggagaagaa
caggagccccaggaaatggatatagatgaaatcttgaagagagctgaaacacgggaaaat
gagccaggtccattgactgtaggggatgagttgctttcacagttcaaggtggcgaacttt
tccaatatggatgaagatgatattgagttggaaccagaaagaaattcaagaaactgggaa
gaaatcatcccggagtcccagagaagaaggatagaggaagaggaaagacaaaaagaactt
gaagaaatatacatgctcccaaggatgagaaactgtgcaaaacagatcagctttaatgga
agtgaaggaagacgtagtaggagcagaagatattccggatctgatagtgactccatcaca
gaaagaaaacggccaaaaaagcgtgggagacctcgaactattcctcgagaaaatattaaa
ggatttagcgatgcagagatcaggagatttatcaagagttacaagaaatttggtggccct
ctggaaaggttagatgctgtagctagagatgctgaactagttgataaatctgagacagac
ctgagacgtttaggtgagcttgtacataacggatgcattaaggctttaaaggacaattca
tctggacaagaaagagcaggaggtagacttggaaaggttaaaggcccaacatttcgaatt
tcaggagtgcaggtgaatgcaaaactagtcatctctcacgaagaagagctggcaccactg
cacaaatccattccttcagatccagaagaaaggaaaagatacgtcatcccatgtcacacc
aaggctgctcactttgatatagattggggtaaagaagatgattccaatctgttagtaggc
atctatgaatatggctatggcagctgggaaatgataaaaatggatccagatctcagttta
acacagaagattttacctgatgatccagacaagaaaccccaggcgaagcagctacagacc
cgtgcagactacctcattaaattactgaataaagaccttgcaagaaaggaagcacaaagg
cttgctggtgcaggcaattccaagaggaggaagacaagaagtaagaagaataagatgaag
gctacaaaaataaaagaagaagtaaaaagtgactcttcaccacaactctcagaaaaatct
gatgaagatgatgatgaggaggataacaaggatgagattgtttcagtgaaacatctacat
aaaaaattaaaaacagagaaagaaaatgaagacaagcctgagccagatattggtataaag
aaggaagctgaagaaaaaagagagacaaaagagaaggaaaataaaagggatttgaaaagg
gagaaaaaagaaaaagaggataagaaagaattaaaagaaaaagataataaagaaaagaga
gaaaacaaagttaaagaatccacacagaaagaaaaagaagtaaaggaggagaaggtaaat
gaaatcaaatcagaaaataaagaaaaatctaaaaaaattccattgctggatactccagtt
catattactgcaaccagtgaaccagttcctatctcggaggaatctgaagaactggatcag
aagacatttagtgtgtgcaaagaaagaatgaggcctgtcaaagcagcactgaaacagctg
gatagaccagagaagggcctttctgaaagggagcagctggaacatactagacagtgtcta
atcaaaattggggatcatattacagaatgcctgaaggagtacacaaatcctgagcaaatc
aagcagtggaggaaaaatttgtggatttttgtctccaagtttacagaatttgatgccaga
aagctgcacaaactctacaaacatgcaatcaaaaagcgccaagagtctcagcaacacaat
gaccaaaacattagcagcaatgtgaatgcacatgtaatcagaaatccagatgtggaaaga
ctgaaagagactacaaaccatgatgacagtagcagggatagttattcttctgatagacat
ttatcacaataccacgatcatcacaaagacaggcatcagggagatgcttacaagaaaagt
gactctaggaaaaggccatattcagccttcagtaatggaaaagatcacagagactgggat
cactacaaacaggacagcagatactacagtgatagtaaacatagaaagttagatgaccac
aggagcagagaccacagatcaaacctggaaggaaacctaaaggacagccggggtcattca
gatcaccgctcccattcagaccacaggatacactcagatcaccgttccacttcagaatac
agccatcataaatcttccagagattacagataccactcagactggcaaatggaccacaga
gcttctggtagtggcccaaggtcaccactagatcagaggtctccttatggttcaagatct
cccctaggacacagatctccatttgaacactcaacggatcacaaaagtacacctgaacat
acatggagtagccggaagacataa
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integrated database retrieval system
