Coturnix japonica (Japanese quail): 107306430
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Entry
107306430 CDS
T04297
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo02010
ABC transporters
cjo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107306430 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107306430 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjo02000
]
107306430 (ABCA1)
Transporters [BR:
cjo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107306430 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
107306430
NCBI-ProteinID:
XP_015705078
LinkDB
All DBs
Position
Z:complement(48617643..48711350)
Genome browser
AA seq
2261 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDT
SIKDVQKVLAKLRKLGNSSGLDLKLRDFLVDNETFSDFLSHNASMPSSAVEELLDAEVNL
QKVIVSGYQMQLQDLCNSSVLSEFLTIQNRSVAMDSEAFLCTLPKETLHGAELAFRANLN
PLKPLQRQFFFNSSLRDLSETVETLRDSLGKLIKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVTNFYDNSTTPYCN
ELMKNLESSPLSRIIWKALKPLLIGKVLYTPDTPAIRKIMAEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKSKAFWDMHLPASNWTVEDVARFLSKHPEESETDNG
MVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGVVFT
EIAPNSTELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFTYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVF
VFLSIFGIVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEESQDRQHLHPDQKGPTEVCKEEEPMHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAMDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRAFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLSQQQFVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYNEQYTFISNDAPEDAGTQKLLDALLNKPGFGTRCMQGHSIPDTPCTVGQKEWTTA
SVPDSVLEILRGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQNL
TGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSHVLPPSNEVSDAIKQVKR
ILELAQGSSGDRFLNSLASFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQQ
GKNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFVSGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVNRERQRIISGGGQSDILEIKELTKI
YRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSN
IQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEK
YAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGGNPDLKPVEEFFG
HAFPGSVLKEKHRNMLQYQLPSSQSSLARIFSVLSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttggacacagctgggattgctgttatggaagaacttcacctacagaagaaga
cagactttccagctgctgatcgaagttgcttggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctacgaacaacatgaatgtcacttcccaaacaaagct
atgccctcagcaggaacattgccctggatacaggggatcatctgcaatgccaacaaccct
tgtttccgctacccaacaccaggggaatcccctggtattgttggaaacttcaatgcgtcc
atagtttcccgcctgttttcggatgccaagaggttactcttgtacagccaacaggacaca
agcataaaggatgtccagaaggtcttggcaaaactgcggaaactgggaaactcctctggc
ttagacttgaaacttcgggatttcctggttgacaatgagacattctcagactttctcagt
cataatgcatccatgccatcttctgcagtggaggagctactggatgcagaggtcaacctc
caaaaggtcatagtgtctggttatcaaatgcaactacaagatctctgcaatagctcagtg
ctgtctgaatttcttacaatccaaaatcgttcagtggccatggactctgaagccttcctt
tgcaccttaccaaaggaaacactccatggagctgagctagcctttcgtgctaacctgaat
cctttgaagcctcttcagagacaatttttctttaattcctccttgcgggatctgtcagaa
actgtggagacattgagggacagcctgggaaagctcatcaaggagcttctgagcatgaag
agttggagtgacatgagacaagaggtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacacaaatctaccaagctgtgtcacgtattgtgtgtggacaccccgaaggtggagga
ctcaagattaaatccctcaactggtacgaggacaacaattacaaagcactgtttggaggc
aacagcactgaagatgatgtaactaatttctatgataactccacaacaccctattgcaat
gagctgatgaagaacctggaatccagcccactttccagaattatttggaaggctttgaaa
cctttgctgattgggaaggtcttgtacactccagacacgccagcaatacggaagatcatg
gctgaggtgaacaggacattccaggagctgggagtgtttcgagaccttggggggatgtgg
gaagagataagcccaaagatctggacatttatggagagtagtcaggaaatggatctgatt
cggacgctgctgaaaagcaaggctttctgggacatgcacttgccagcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaagcatccagaagagtctgagacagataatgga
atggtgtacacctgggtggatgccttcaatgagacagatagagctattcagaccatctca
cgcttcatggagtgtgtcaacttggacaaactggagcctgtggccacagaagtccggctt
ataaataagtccttggagcttctggatgaaaggaggttctgggctggtgttgtcttcact
gaaattgctcctaacagcacagagctccctcagcatgtgaaatacaaaatacgcatggac
atcgacaatgtggaaaggaccaacaagattaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggatatgcgttatgtgtggggaggttttacctacttgcaggatgtg
gtagaacaggccatcatcagggtgcagacaggcacagaaaagaagacaggagtttatgtg
cagcagatgccttatccatgttatgtggatgacatatttctgcgtgtcatgagccgttct
atgcctctcttcatgactctagcctggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaagaagcccggctgaaggaaacgatgaggattatgggccttgacaatggc
atcctttggctaagctggttcattagcagtctcattcctcttctcatgagtgcaggtcta
ctggtgctgatcctcaagatggggaatctgctgccttacagtgaccctagcgtggtgttc
gttttcctctcaatctttggcattgtgaccatcctgcagtgctttctcatcagcaccgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtgtactttacactataccta
ccctatgtgctgtgtgttgcctggcaggactatgtcagcttctcactcaagatctttgct
agcctgttgtcaccagtagcctttggctttggatgtgagtactttgcgctgtttgaagag
cagggagttggtgttcaatgggacaacttctttgagagcccactagaagaagatggcttt
agcatcaccacatctgctgtgatgatgttgtttgacacgttcctctatggggtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccttggtactttcct
ttcacaaaatcttactggtttggtgaagaatcccaggacaggcagcaccttcatcctgac
cagaaggggcccacagaagtttgcaaggaggaagagcctatgcatctgagtctcggtgtc
tccatccagaacctggtgaaggtttatcgtgatggcaagaaagttgctgtggatggtctc
acactgaatttctacgaagggcagatcacatcatttctgggacataacggagcagggaaa
accactacaatgtccatcttgactggcttatttcctcctacttctggtactgccttcatc
ctgggtaaagatatccgctcagagctcagcaccatcaggcaaaacttgggtgtctgtcca
caacacaacgtgctgtttgacttgctgactgtggaagaacacatctggttctatgctagg
ctcaaagggttgccagaaaagaaggtaaaagaggaaatggagcagatggcaatggacgtt
ggtttgcctcacaaactgaaagccaggacgagcaaactctctggtggcatgcagaggaag
ctctcagttgccttagcctttgttggtggatccaaagttgtcattctggatgagcccaca
gctggagtggatccttattctcggagagggatatgggaactgcttctgaagtatagacaa
ggccgcactatcatcctctccacccatcacatggatgaggcagacattctgggagaccga
attgccatcatttcccatggcaagctctgctgcgttggttcttctcttttcctgaagaat
cagctggggacaggctattacttgacccttgtcaagaaagatgtagattcctcgttgagc
tcctgtcgaaacagcagcagcacagtgtcctatctaaagaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacaccctgacaatagatgtc
tctgctatttcaaatctcattacaaaacacgtccctgaggcaagactggttgaggacatt
ggtcatgagttaacctatgtcttgccgtacaaagctgctaaagagggagcttttgtcgag
ctgttccatgaaatcgatgaccgtctttctgatcttggcatttccagctatggcatttct
gagaccaccttggaggagatcttcctcaaagtggctgatgatagtggtgtggatgcagaa
acatcagatgggacactgcctgccagaaggaacaggcgtgcatttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgaccctaatgattcagacattgatcca
gcagaatccagagagactgaccttctcagtggcatggatgggaaaggctcctaccagatg
aagggctggaagctctcccagcaacagttcgtggctctgttgtggaagaggctgcttatt
gccaagaggagccggaagggcttctttgctcagattgtgctgccagctgtctttgtgtgt
attgctctcatgttcagcctgattgttcctccctttgggaagtatcccagcctggaatta
cagccctggatgtacaatgagcagtatacttttattagtaatgatgctccagaagatgca
ggcactcagaagcttttggatgcccttctcaataaacctggctttggaacacgctgtatg
caaggacactccatcccagacactccttgcactgtgggacagaaggaatggaccactgct
tcagtcccagactcagtcctagaaatcttgagaggcaactggagcatggagaacccttct
ccatcttgtgagtgcagcaatgagaagatcaagaagatgctgcctgtgtgtccccctggt
gcaggcgggctgccacccccacagcgagaacaagacactgctgacatcctccagaatctg
acaggtcgcaatatatctgactatctagtgaagacctacgcgcagatcattgggaaaagc
ttaaagaataaaatctgggtgaatgagttcaggtatggaggcttttccttgggagccaga
agttcccatgtgcttcctccaagcaatgaagtcagtgatgccattaaacaggtgaagagg
atcttggagctagcacaggggagttctggagatcgatttctcaacagcttggcaagtttc
atgaaaggtctggacacaaaaaacaatgtgaaggtgtggttcaacaacaagggttggcat
gccattgcctccttcctgaatgtgatcaacaatgccattcttcgggccaacctgcagcag
ggcaaaaaccctagtgcttatgggatcactgccttcaatcacccactcaacttgactaag
caacagctctctgaagtggctctgatgaccacgtctgtggatgtcctagtctccatctgt
gtgatctttgccatgtcctttgttcctgccagctttgtggtgttccttatccaggaacgt
gtcagcaaggctaagcacttgcagttcgtcagtggtgtgaagcctgtgatctactggctg
gctaactttgtctgggatatgtgcaactacattgttccagccacacttgtcatcatcatc
ttcatctgcttccaacagaagtcctatgtatcttcttccaacctgcctgtacttgctctt
cttctgcttctctatggttggtctattactcctctcatgtatccagcctccttcgtgttc
aaaatccccagcacagcatatgttgtgctgaccagtgtgaacctcttcattggcatcaat
ggtagcgtggccacctttgtcctggagctcttcaccaacaataagctgaacaacatcaat
gacatcctaaagtctgtctttctcatcttccctcacttctgcctgggacggggtcttatt
gatatggtgaaaaatcaggccatggctgatgctctggagaggtttggtgagaatcgtttt
gtgtcccctctgtcatgggacctggtgggaaggaacctgtttgccatggcagtggagggt
gtagtcttcttcctcattactgtgctcatccagtacagattcttcatcaaacccaggcct
gtctatgccaagttaccccctgtgaatgatgaagatgaagatgtaaacagagaaaggcag
agaataataagtggaggaggacagagtgacatactggaaatcaaggagctgaccaagatt
tacagaatgaaacgaaagccagcagttgacaggatatgtgttggaatccctcctggagag
tgctttggacttctaggagtaaatggtgctggcaagtcatccactttcaagatgctaact
ggtgatacagatgtgacaggaggagaagctttcctcaaaggaaacagtatcctgtcgaac
atccaagaagttcatcagaacatgggctactgtccgcagtttgatgctgttaatgaactg
ctgacagggcgagaacacttggagttctttgcactcctcagaggtgttcccgagaaagaa
gtttgcaaggttggcgaatgggcaattcggaaactgggccttgtgaaatatggagaaaaa
tatgcaggcaactacagtggagggaacaggcgcaagctctccacagcaatagccctcatt
ggagggccacctgtggtattcctggatgagccaacaacagggatggatcccaaagcacgc
cgtttcttgtggaactgtgctctgagtgttatcaaagaggggagatcagtagtgcttacg
tctcacagcatggaagagtgtgaagcgctgtgcactcgaatggcaataatggtcaatggg
cgattcaggtgtctgggcagcgtccagcatctaaaaaacaggtttggagatggttatacc
atagtggtgcgaattgcagggggaaacccagacctgaagccagttgaggaattctttggg
catgcctttcctggaagtgtcctgaaggagaagcatcgcaatatgctgcagtaccaactt
ccgtcttcacagtcttcactggctagaatattcagtgttctctcccagaacaaaaagagg
ctccacatagaagactactctgtttctcagaccacacttgaccaagtatttgtaaatttc
gctaaggaccaaagtgacgacgaccacactaaggacctgtcattgcacaaaaaccagact
gtggtagacattgcaatccttaattcctttctgcaagatgagaaggtaaaagaaagttgc
gtgtga
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integrated database retrieval system
