Coturnix japonica (Japanese quail): 107306647
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Entry
107306647 CDS
T04297
Symbol
APTX
Name
(RefSeq) aprataxin isoform X5
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107306647 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107306647 (APTX)
Enzymes [BR:
cjo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
107306647 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
107306647 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
107306647 (APTX)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107306647 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
107306647 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
zf-C2H2_4
FHA
zf-C2H2
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
107306647
NCBI-ProteinID:
XP_015705443
LinkDB
All DBs
Position
Z:complement(62418311..62427850)
Genome browser
AA seq
352 aa
AA seq
DB search
MRDCWLLAMEERGLRVLLPHMADVVLGRGPLTGITDRRCSRRQVVLKADCNEGYVTVKQI
GVNTTSVDLVDVGKGEEVKMRPGQVLHMVNRRYPFVVEFSEFSEESEETVTEEEEKTQTE
KRPFEESCVDDTENVPRKAKKMMVMDTLSSFSDFRPSKSSTPLFEESTSGKEHLGHWSQG
LKSAMQDPKEQVYKDEKTVVIKDKYPKARYHWLILPWDSISSLKSVTREHLELLEHMHSV
GQKMIEQCPAKGSLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTEYFLNS
KDVIEMVRSEGKVTVNDQASELLKLPLKCHICKQQLSTIPQLKEHLKKHWTN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagggactgctggctgctggccatggaggagcgaggcctacgggtgctgctgccccac
atggccgacgtggtgctgggccgcgggccgctcacaggcatcaccgacaggaggtgctcg
cggcggcaagttgtgttgaaagcagactgtaacgagggatatgttactgttaagcagata
ggagtcaacacaactagtgttgacttagtggatgttggcaagggtgaagaggtgaaaatg
aggccaggccaagttctgcatatggtgaacagacgttacccctttgtggtggaatttagt
gaatttagtgaagaatcagaggaaactgttacggaagaagaagagaaaacacaaactgaa
aagaggccatttgaggagtcctgtgtggatgatacagaaaatgttcccagaaaggcaaag
aagatgatggtgatggatacactaagcagtttttcagacttcaggccaagcaagagtagc
acacctctatttgaagagtcaacgagcggaaaggaacatttggggcactggagtcaaggt
ttaaagagtgccatgcaagatccaaaagagcaggtttataaggatgagaagactgtagtc
atcaaggataaatatcccaaagcacgttaccactggcttattttaccgtgggactccatt
tctagcctcaaatcagtcaccagagagcatcttgagctcctggaacatatgcactcagtt
gggcaaaaaatgattgaacagtgccctgccaaaggaagcctggagttccggctgggttac
cacgccattcccagcatgagtcaactgcatttgcacgtaatcagccaagattttgattcc
cctgctctgaaaaccaaaaagcattggaactcctttaccacagaatacttcctcaactcc
aaagatgtgatagagatggtacgaagtgaagggaaagtaacggtgaatgatcaggcctct
gaacttctcaaattgcccctcaagtgccatatctgcaaacagcagctgtccactatccca
cagctaaaggaacatctcaagaaacactggacaaattga
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