Coturnix japonica (Japanese quail): 107306729
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Entry
107306729 CDS
T04297
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
cjo
Coturnix japonica (Japanese quail)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
107306729
NCBI-ProteinID:
XP_015705550
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All DBs
Position
Z:66354344..66411995
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AA seq
1010 aa
AA seq
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MSGFTAWRKSSMCLYYYAESPKNVHRRIMEAPEYLDLDEIDFSDDISYSITSLKTIPELC
RRCDSQNEDRSEAHGVVQEDITSLEDQWNCIISSSSWNCGGSTLIGNAQKPTGIADACNK
FRPVKRVSPLKHQPESSENNESDDQKNQKGEYQKGNESQPAPPNDDQNPGEGENLKSKNI
EPTVLLGELEHYDLDMDEILDVPYIKSNQQLVPFTKVAPEKKNFGLCSTVNGVGGKTCPT
ENTEPAGVTQFCVLSPVKGSQLRKTQPIVLDQHKHLTEELELSQPLAKCSSVHESEAQGK
GFLCRTFVGPQAHKTEKTMPNCHLRTFHLQTAVAESKQLEELNMSWSSAGGPEERNEEVK
KFKSILNIVKEGQISLLPHLAADNLDKIHDECDNNLLHVAASKGHAECLQHLTSLMGEDC
LNERNMEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDHPSLIHYAGCYGQEKILL
WLLQFMQEQGISLDEVDQDGNTAVHIAAQHGYLGCIQTLVEYGANVTMQNHVGEKPSQSA
ERHGHTMCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQLQQLLEAQRSEGKSL
PTSASSPSSPASGKPQWKPSEADELSPPKSKLNAQDGIQILGSLGTSSRARAKIKDEDSD
KILRQLLGKEISENVCTQEKLTLEFQDAHASSKNVKKILPEKRELKLARLRQLMQRSLSE
SDTDSANSEDHKNTPVKRTDKLRPQPIVESVESTESLHLMIKKHTSAAGRRFPFGTRASK
SVDGHSPSPTSESSDPDNEAHYQSGTVPQSQFCGDISPSSTDGAAAQKVATSPKSALKSP
SSKRRTSQNLKLRVTFEEPVVQVELAEEELNEEKDKERGKALSRAPPSTGEPSGDQMKRP
FGTFRSIMETLSGNQNNNNNCQTANLIKTSSTLPFSSLGRKTADSKGNPAALTKGRNKPG
PCCSHTNLFSSALNGEHPCSYAWHDSISRKSQKSYSQKSSEETELQEFFL
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtttcactgcatggaggaaatcctcaatgtgtctttactactatgctgagtca
cccaaaaatgtccatagaagaataatggaagcccctgaataccttgatttggatgagata
gactttagtgatgatatttcgtactctataacttctctgaagactatcccagaattatgt
agaaggtgtgattcacaaaatgaagaccgatcagaagcacatggagttgtacaggaagat
atcacttcactggaagatcagtggaactgcatcatttccagcagcagctggaactgtgga
ggctcaactcttattggaaatgcacagaaaccaacaggaattgcagatgcgtgcaataaa
ttcagaccagtgaagagggtttccccgttaaagcaccagccagaaagctctgagaacaat
gaaagcgatgaccaaaagaaccagaaaggtgaataccagaagggcaacgaatctcagcct
gcacctccaaatgatgaccagaacccgggagaaggagaaaaccttaaaagtaaaaacatc
gagcctaccgttctgcttggggagctggagcactatgacctggatatggatgaaattttg
gatgtgccttatattaaatcaaaccaacaacttgttcctttcacaaaggtagcccctgag
aaaaagaatttcggtctatgttcaactgtgaatggtgttggtggcaagacctgccctaca
gagaacacggagcccgctggggtgacacagttctgtgttctctctcctgtgaaaggctct
cagctgagaaaaacacagcccattgtccttgatcagcacaagcatttaacagaagaatta
gagctttcccagcctttagcaaagtgtagctcagtccatgaatccgaagcccagggcaaa
gggttcctctgtaggacatttgttggtcctcaagctcacaaaactgagaagactatgcca
aactgccacctaaggacttttcacctgcagacagcagtggcagagagcaagcagcttgag
gaactgaatatgagctggagcagtgcaggggggccggaagagagaaatgaagaggtgaag
aaatttaagagcatcttaaacattgtaaaggaggggcaaatatcgttactgccacatttg
gcagcggataatctggataagattcatgatgaatgtgacaacaatctgttgcatgtagca
gcatcaaagggacatgcggaatgccttcagcatctcacttctttgatgggtgaagactgt
ttgaatgaaagaaacatggagcagctcactccagctggtttagcaataaagaatggtcag
ctggagtgcgttcggtggatggtgagcgaaacagaagctattgcagagttaagctgctcg
aaagatcacccaagccttattcattatgctggctgctatggtcaggagaaaatccttctg
tggcttcttcagtttatgcaagaacaaggtatttcactggatgaagtcgatcaggatgga
aatactgctgttcatatagctgctcaacatggctatctaggatgcatacagacgttagtt
gaatatggagcaaatgtcaccatgcaaaaccacgtgggagagaagccctcacaaagcgct
gagcgacatgggcacaccatgtgttcccgctacttagtggtggtggagacctgtatgtca
ttggcttctcaggttgtgaagctaaccaagcaactgaaggagcagacagtagaacgtgtg
acgttgcagaatcaactgcagcagcttttagaagcccagcgatcagagggcaagtctcta
cccacatctgcaagctcgccatcatcccctgcctctggcaaaccccagtggaaaccatcc
gaagcagatgaattgtctccaccaaaaagtaaattgaacgcccaagatgggattcagatt
cttggcagtttgggaacttctagtcgtgctcgagccaagataaaagatgaggactcagat
aaaatcttgcgccagttgttgggaaaggaaatctctgaaaatgtctgtacgcaggaaaag
ctgaccttggaatttcaggatgctcatgcatcctccaagaacgtgaagaagattttgcca
gagaaaagggagctgaagttagccagactgaggcagctaatgcagaggtctctcagcgag
tctgacacagactcagcaaattctgaggaccataagaacacccctgtgaaaagaactgac
aaactgaggcctcaacccatagtggaaagtgttgagagcactgagagtttgcatctgatg
attaagaaacacacttcagcagcagggcgccgcttccctttcggtaccagagcttctaag
tcagtggatggccatagtccttccccaacttcagagagcagcgatccagataacgaagcc
cactatcagtctggtactgtacctcagagccagttttgtggagacatctctccatccagc
acagatggtgccgctgctcaaaaggttgctacaagccctaagagtgctctcaagtctccg
tcttctaagcgcagaacatcccaaaacttgaaactcagagtgacttttgaggagcctgtg
gtgcaggtggagctagctgaggaagagttaaatgaggaaaaggataaagaacggggcaaa
gcactttcgcgggctccacccagcactggggagccatcgggggaccagatgaaaaggcct
tttggaaccttcagatccataatggagacactgagtggtaaccagaataacaacaacaac
tgtcaaacagcgaacctgatcaaaacctcatcgacgctgcctttttcgtcattaggaaga
aagactgcagacagcaagggaaacccagcagctctgacaaaaggaagaaacaagccaggg
ccttgctgcagccacaccaatcttttctctagcgcactgaatggagaacatccgtgtagc
tatgcttggcatgatagcatcagtaggaaaagccagaagtcctacagtcagaagagttca
gaagagacagagctgcaggaattcttcctctaa
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