Coturnix japonica (Japanese quail): 107306801
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Entry
107306801 CDS
T04297
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo00100
Steroid biosynthesis
cjo01100
Metabolic pathways
Module
cjo_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107306801
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cjo01006
]
107306801
Enzymes [BR:
cjo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
107306801
Prenyltransferases [BR:
cjo01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107306801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
Motif
Other DBs
NCBI-GeneID:
107306801
NCBI-ProteinID:
XP_015705636
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All DBs
Position
3
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AA seq
222 aa
AA seq
DB search
MIQISMEFRNLAKVYQDVISDICHKMGVGMAEFLEKKVDSQSEWDRYCHYVAGLVGIGLS
RLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRYTKKLS
DLTKPENIDMAVQCLNELITNALRHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAACY
NNKQVFRGVVKIRKGQAVTLMMDATNMQSVKAIMYQYVEEVG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgatacagatctccatggagttcaggaacctggcaaaggtctaccaggatgtgatctct
gatatttgtcacaagatgggcgttgggatggcggagttcttggaaaagaaggtggattct
cagagtgagtgggatcggtattgccactacgttgctgggctggtggggataggcctttcc
cgactcttctctgcatcagagctagaagatcctattgtaggacaggacacagagctggca
aactctatgggcctcttcttgcaaaaaaccaacatcatccgtgactatttggaggaccag
ctggaaggaagggagttctggcccagagaggtttggagcagatacacgaagaagctctct
gaccttaccaagccagagaacatagatatggccgtccagtgtctgaatgagctcatcacc
aatgctctccgccacgtccctgatgtcctcacttacttgtctcgcctgaaaaaccaaagt
gtcttcaacttctgtgctatcccccaggtgatggctattgccactcttgctgcctgctat
aacaacaagcaggtattcagaggggtagtgaagatccggaagggacaagctgtcacactg
atgatggatgccacaaacatgcaatctgtcaaagccatcatgtaccagtatgtggaagag
gtaggttga
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