Coturnix japonica (Japanese quail): 107307005
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Entry
107307005 CDS
T04297
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107307005 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107307005 (APEX1)
Enzymes [BR:
cjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107307005 (APEX1)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107307005 (APEX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
107307005
NCBI-ProteinID:
XP_015705931
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MADGFFKALFPVPTLISGSGFRSEQHKGTDRSELCSASGVSMLFYFRYRRYFPAALPAFG
DTRWSGMPKRGRNQQDGGQEGVEAKRGACGAALYEDPPLRESTSDGRPYNWKVTSWNVDG
VRAWVRKGGIQWLQSEAPDVLCLQETKCGSDSVPSELSELELLPHKFWGSAVGKSGYSGV
GLLSRTEPIRVTHGIGIEEHDNEGRVLTAEYPTCYIVCAYVPNSGRGLTRLQYRQRWDRD
FKAYLIGLDTKKPVILCGDLNVAHEEIDLKNPKSNRKTAGFTQEERDGMGEILKAGFIDS
YRELYPTTPYAYTFWTYMGGARERNVGWRLDYFLLSKRLGAALCDSKIRSTAMGSDHCPI
TLYMAMDGPKIPKS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcttctttaaggccctatttccggttccgaccttgatttccggttccggt
tttcggagcgaacaacacaagggcacagaccggtccgagctctgctccgcttccggtgtt
tccatgctcttctacttccggtatcgacgttactttccggctgcacttccggctttcgga
gacacgaggtggagcgggatgccgaaacggggcaggaaccagcaagatggcggacaagag
ggcgtggaggcgaagcgtggcgcgtgtggggcggccctatatgaggatccaccattgagg
gaaagcacgagcgacgggcggccctacaactggaaggtgacgtcctggaacgtggatggg
gtcagagcctgggtgcgcaaagggggaatacagtggctgcagtcggaggccccggacgtt
ctttgccttcaagaaaccaaatgtgggtcggactcggttccgtcggagctgtcggagctg
gagctgctgccccacaagttttggggttcggccgtggggaaatcagggtacagcggagtg
gggctgctcagcaggaccgagcccatccgggtcacacatggcattggcatagaagaacac
gacaatgaaggccgggtcctgacagctgaataccccacgtgttacatcgtctgcgcctac
gtccctaattcgggtcggggtctgacccgcctccaataccgccaacgttgggatcgggat
tttaaggcttatttaataggattagacaccaaaaaacccgttatcctttgcggggacctt
aacgtggcccacgaagaaatcgacttaaaaaaccctaaaagtaaccgaaaaacggccggt
tttacccaagaagaacgggatgggatgggggaaatcctaaaagccgggttcattgattcc
tatagggagctgtaccctacaacaccctatgcctatacgttctggacctatatggggggc
gccagggagaggaacgtgggctggaggttggattatttcctgctctccaagagattgggg
gcggccttgtgtgattccaagatccgatccacggccatgggcagcgaccactgccccatc
accctctatatggccatggacggacccaaaatcccaaaatcttga
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