Coturnix japonica (Japanese quail): 107307494
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Entry
107307494 CDS
T04297
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107307494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107307494
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107307494
Spliceosome [BR:
cjo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107307494
Complex C
U4/U6.U5 tri-SnRNP related factors
107307494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
Cas3-like_C_2
DEAD
Motif
Other DBs
NCBI-GeneID:
107307494
NCBI-ProteinID:
XP_015706486
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MRSGPRAGTGSGLVAAAGSEAVEAAGSGKMAAALERWVAEELQELLGMSGRHVPAFLVAL
AKRSRNVEDLLDRLRETEALKVEEPRVREFARELWGKIPRDPPKEPPGRAAERAALELQR
RSRGYRPIESDEEGDGGSSEPTPTPQRRRHLRRRQRSESPENDTETAPEPAEDPSEEPEA
EWEASERERLRDLEERDAFAERLRRRDRHRTRNVLTRPDAKVLGGVWGSMGLIDGVPELR
KKSRREYLAKREKDKLEELEAEIADEEYLFGEETLTSSERRELEYKRRVRDLAKEYKRAG
EKEKLEKSNRYYMPEESRDKKIPEREDPSTEEERLAPRDEQRRWEEERMGAASLRFGARD
AAQRRPPPNYDFILEEDEMIQFVSAVQMQGTEPEKVNRGGMGVCGGEMGVLGGGYGWERK
VGYSIRFEDCTSERTLLKYMTDGMLLREFLTEPDLASYSVIMVDEAHERTLHTDVLFGLV
KDIARFRPELKVLVASATLDTQRFSTFFDDAPVFRIPGRRFPVDIYYTKVPSPPYIVPDP
PISPPXEEIEACVELLQERCRRLGSKMAELLVLPIYANLPSDMQARIFEPTPPGARKVVV
ATNIAETSLTIDGIVYVLDPGFCKQKSYSARTGMESLIVTPCSRASANQRAGRAGRVAPG
KCFRLYTAWAFQHELEETAVPEIQRADLGCLVLLLKSLACREHPQGIHSHFSARDRRFRR
RWSPPTARRSPSAPPLVAYSCVERELIAATYACVRNWAVAATMGHRGLMRYYGAYGLGRR
MAELPVEPMLAKMILASEQYGCTEEVLTVAAMLSVNNAVFYRPKDRVLHADSARLGFHIP
GGDHLVLLNVYNQ
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtgggccgcgggccggaaccggaagtgggctcgtagcggccgccggaagtgag
gccgtagaggcggccggaagtgggaagatggcggccgcgctggagcgatgggtggccgag
gagctgcaggagctgctcgggatgagcggccgccatgtccccgccttcctggtggccttg
gcgaaacggagccggaacgtggaagatctgctggacaggctgcgggaaacggaggcgctg
aaggtggaagagccgagagtccgggagttcgcgagagagctgtgggggaagatcccccgc
gatccccctaaggagccccctgggcgggcggctgagcgggcggcgctggagctgcagcga
aggagtcggggttatcgccccatagagagcgatgaggagggggatgggggcagctctgag
cccacccccaccccacagcgacggcgacatctgcgacgccgccagcgatccgagtcgcct
gagaacgacaccgagacggcaccggaaccagctgaggatccatcagaagaaccagaagca
gaatgggaagcgtcggagcgggaacggcttcgggacctggaagaacgtgacgcattcgct
gaacgtctgcgacgccgcgaccgccatcgcacccgcaacgtcctcacccgacccgacgcc
aaggtgctggggggggtctgggggtctatgggtcttatagatggggtccccgagctccgt
aagaaatcccgtcgcgaatacctggctaaaagggaaaaggacaaactggaagagctggaa
gctgagatcgccgacgaggaatatctgtttggggaggaaacattgaccagctccgaacga
agggagctggaatataagaggagggtccgggatttggcaaaggaatataagagagcaggg
gagaaggagaagctggagaagagcaatcggtattacatgcctgaggagagcagggataag
aaaatcccagagcgtgaagaccccagtacagaagaggaacgtttggcccccagggatgaa
cagagacgatgggaagaggaacgaatgggggcggcctcgttacgatttggggcccgtgat
gccgcccaacgtcgacccccccccaattacgactttatcttggaggaggatgagatgatt
cagttcgtcagcgccgtgcagatgcagggaaccgagcctgagaaggtgaatagagggggt
atgggggtctgtgggggagaaatgggggtgctgggcgggggatatgggtgggagagaaag
gtcgggtacagtatccgctttgaggactgcacgtcggagcgcacgctgctcaagtacatg
acggacgggatgctgctcagggagttcctcaccgagcccgacctcgcgtcctacagtgtg
atcatggtggacgaggcccacgagcgcaccctacacaccgacgtcctgtttgggctggtg
aaggacatcgcccggttccgacccgaactgaaggttctggtggcatcggccacgttggac
acacaacgattctcaaccttcttcgacgacgctcccgtctttaggatcccgggaaggagg
ttccctgtggatatctactataccaaggtcccctccccaccttatattgtccctgacccc
cccatatcccccccataggaggagattgaggcctgtgtggagctgctccaggagcgctgt
cgtcgcctgggctccaagatggcggagctgctggtgctgcccatctacgccaacctccct
tcagacatgcaggctcggatcttcgagcccacgccgcccggagcccggaaagtggtggtg
gccacgaacatcgcagagacgtcgctgaccatcgacgggattgtgtacgtgctggatccc
gggttctgtaagcagaagagttacagcgcaaggactgggatggagtcgctcatcgtcact
ccgtgctcacgggcctcagccaatcagcgcgcagggcgggcaggccgtgttgcccctggg
aagtgtttccggctgtacacggcctgggcgttccagcacgagctggaggagacggcggtg
cccgaaatacaacgcgcggatctgggctgcctcgtgctgctgctcaagagcctcgcgtgt
cgagagcatccacaggggatccacagccacttctccgcccgggatcggcgattccggcgt
cgctggtccccaccgactgcgcgacgatctccatccgcgccgccgctggttgcgtattca
tgcgtcgagcgcgagctgattgctgctacctatgcatgtgtccgcaattgggcagtcgcg
gccactatggggcacagaggactcatgaggtattatggcgcctatggactgggccggcga
atggcggagctgccggtggagcccatgttggccaagatgatcctcgcgtccgagcagtac
ggctgcacagaggaggtgctgacggtggccgccatgttgtcggtgaacaacgccgtcttt
taccggcccaaggatcgagtccttcacgctgacagcgcccggctgggattccacatcccg
gggggggaccacctggtgctgctcaatgtctacaaccag
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