Coturnix japonica (Japanese quail): 107307934 Help Entry 107307934         CDS       T04297                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism cjo  Coturnix japonica (Japanese quail) Pathway cjo04382   Cornified envelope formation cjo04510   Focal adhesion cjo04512   ECM-receptor interaction cjo04518   Integrin signaling cjo04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cjo00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     107307934 (COL4A1)    04518 Integrin signaling     107307934 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     107307934 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     107307934 (COL4A1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     107307934 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cjo04147]     107307934 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:cjo00536]     107307934 (COL4A1) Exosome [BR:cjo04147]  Exosomal proteins   Exosomal proteins of other cancer cells    107307934 (COL4A1) Glycosaminoglycan binding proteins [BR:cjo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107307934 (COL4A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  107307934 NCBI-ProteinID:  XP_015706908 LinkDB All DBs Position 1:complement(125051528..125157540) Genome browser AA seq 1676 aa AA seqDB search MWRWLGFGLLLSAELSAVSAAGCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQGPEG PPGPPGLKGDTGEPGLPGTKGTRGPPGPSGFPGNPGLPGIPGQDGPPGPPGIPGCNGTKG ERGPVGPPGLPGLTGSIGPPGPPGMKGDPGEVIGLLPPSVLKGDKGFPGQPGLPGPPGTP GFQGPMGPPGIPGEPGPPGPPGPPGEKGYMGLGFQGPKGEKGEQGVQGPPGPPGPAPHMK EKGSEIIKGEKGEPGEKGEQGVPGLPGSGYRGEKGEPGKPGPRGKPGKDGEPGPKGEPGL PGGFGIPGRPGEPGAKGEKGDQGPQGPPGRIIDAGPIDTFGEKGDPGVSGLPGIKGQKGE KGFPGAQGIPGIPGRPVPDMVGSPGVPGQRGEKGEKGSPGFPIPGPPGRDGFPGPPGLPG PPGPPGVTDGIDQCQQGQPGAPGIPGPPGQHGFPGEMGEKGEKGETCTLCDKVGPPGLPG PQGLPGPAGFPGQAGFKGDRGLPGLDGLPGVPGPPGAPGLIGRPGAKGEPGDFTYDSILK GEKGDPGFPGQPGIPGREGIPGKDGLPGPQGPKGASGTAGLKGERGPPGQPGFPGVRGER GLPGPPGIGTAGLPGDKGDRGFAGTPGLPGLPGAKGEAGRTVPLPGPPGADGLPGPPGFP GPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFPGQPGSPGLPGTPGTPGLDG FPGTPGLQGQKGEPGVGLPGPKGLPGIPGPAGIPGEKGNPGLPGLRGEQGFPGVPGQQGF RGDPGLPGLQGLPGPQGSPGVGPPGLPGPAGQPGPEGPPGFPGIKGERGFPGIPGLDMPG PKGDKGSQGQPGVPGSVGLPGLPGPQGSVGLKGSAGAKGEMGVMGTPGLPGTPGPVGDRG LPGEKGSQGFKGVVGPQGDPGVKGDKGEAGLPGIPGSMDTMDMVSLKGQKGDPGEKGDLG PTGEKGLRGEYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPG TPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPGIGFPGSPGEKGEPGRTGSPGLSGD KGEKGNAGIPGMPGAPGPKGSPGIAGFPGSPGLHGAKGEKGLPGLSGIPGLKGEPGEPGA PGPAGAIGQKGEPGYDGIPGTAGAKGEQGLPGRGLPGFPGAKGDKGAKGEVGFPGSPGIP GIPGLKGEQGYAGPPGPKGNQGLPGLPGSAIEGPKGDRGPQGQPGLPGLPGPTGPPGPPG LKGAKGEQGSDGWPGNPGGPGDKGDPGFQGLPGSPGLPGGAGEKGDLGPPGVPGVPGPKG SAGFPGLKGERGDQGLPGILKFSINFPGLQGPPGPPGAFQLIKGDPGLPGPVGPVGLKGF PGLPGPKGQQGVTGPSGVPGPPGSPGFDGRPGQKGEVGPYGPPGPRGIPGPPGPEGLPGA MGPPGAASVAHGFLVTRHSQTTEEPQCPFGTRLIYHGYSLLYVQGNERAHGQDLGTAGSC LRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGESIRPFISRCSVCEA PAMVIAVHSQTIQIPPCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPF IECHGRGTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRNT NT seq 5031 nt NT seq  +upstreamnt  +downstreamnt atgtggcgttggctgggcttcgggctgctgctgagcgccgagctcagcgccgtgtccgcc gcgggatgttctggttgtggaaaatgtgactgcagtggagtaaaaggacaaaagggagaa agaggccttccgggactacagggtgtgattgggtttcctggaatgcaaggacctgaaggt ccccctgggccaccagggcttaagggtgatactggagaaccagggctgccaggaacaaaa ggaacaagaggcccaccaggaccatcaggatttccaggaaacccaggcctccctggcatt cctggacaagatggccctcctggtccacctggcattccaggatgtaatggcacaaagggt gaaagaggtccagtaggtcccccaggtttaccggggctgactgggagcataggaccccca ggacctcctggaatgaagggagatccaggtgaagtgattggtcttttacctcctagcgtg ctaaaaggtgataaaggctttcctggccaacctggactacctggtccacctggaactcca gggtttcagggaccaatggggccaccagggattccaggagaaccaggtccccctgggcca ccaggacctccaggcgaaaagggctacatgggcttgggctttcaaggtcccaaaggtgaa aagggagaacaaggggtccagggtcccccagggccaccaggaccagcaccgcacatgaaa gaaaaaggaagcgaaatcataaagggagaaaagggtgagccaggcgaaaagggtgaacag ggagtcccaggattgccgggctcaggttacagaggagaaaagggtgaacctgggaagcct ggtccacggggaaagcctggaaaagatggtgaaccaggaccaaagggagaacccggcttg cctggagggtttgggattccaggacggcctggggaacctggtgctaagggtgaaaaaggt gatcagggtcctcaagggcctccaggaagaattatagatgctggaccaatagatactttt ggtgaaaaaggagatcctggagtttcaggtttgcctggaataaaaggtcaaaaaggtgaa aaaggtttccctggtgcacaagggatcccaggaattccaggtcgaccagttccagacatg gtaggatcacctggtgtccctggccagagaggtgaaaaaggtgaaaaggggtctccagga ttccctatacctggacctccaggaagggatggtttcccaggcccgcccgggttgcccggc ccaccaggtcctccaggtgtaacagatggaattgatcaatgtcagcaggggcaacccggt gcgccaggtatacctggacctccagggcaacacggatttccaggagagatgggagagaaa ggtgaaaaaggtgaaacctgtaccttgtgtgacaaagtaggacctcctggacttccagga ccacagggactgccaggtccagcaggttttccgggacaggcaggtttcaagggtgacaga ggcttacctggacttgatggccttccaggcgtacctgggcccccaggcgctccaggactc attggccgccctggggcaaaaggagaaccaggagattttacttacgattccatcctgaaa ggtgaaaagggagatcctggtttcccaggacaaccaggtattcctggaagagaaggaata ccaggaaaggacggattgccaggtcctcaaggtccaaaaggagcatcgggtacagctggc ttgaaaggagaacgtggtccccctggccaacctggattccctggagtacgtggtgaaaga ggtttacctggccctcctgggataggcactgcagggctacctggtgacaaaggagacaga ggttttgctggaaccccaggtttaccaggtcttccaggggcaaagggtgaagcgggacga actgtaccactccctggacctcctggggcagatggccttcctggacctcctggtttccct ggaccccaaggtgacaaagggaatcctgggcttccagggagacctggtctgccaggagaa aaaggtgctgtcgggcagccaggtatagggtttcctggacctccaggacctaaaggcttc cctggtcagcctggctcacctggtctgccggggactcctggaacccctggcctggatggt tttccaggaacgccaggtttacagggtcaaaaaggtgaaccaggagtgggtctccctggt cctaaaggattaccaggcatcccaggaccagctggcatccctggagaaaaaggaaatcct gggctgcctggcttacgaggtgaacaagggttcccaggcgtacctggacaacaaggattc agaggagatccaggtctccctggactacaaggcttgccaggcccccaaggctcaccagga gtgggcccgccaggattgccagggcctgctgggcagccaggacccgaggggccaccagga tttcctggaataaaaggagaaaggggcttccctggaatcccaggtctggatatgccaggg ccaaaaggagataaaggtagccagggccaacccggagtaccagggtctgtggggttacct ggcctgccaggtccacaaggatctgttggactgaaaggatcagcaggagccaaaggagaa atgggagttatgggaactccagggttgccagggactcctggaccagttggagatcgaggg ttgcctggtgaaaaaggtagccaaggtttcaaaggtgtggttggaccacagggcgatcca ggtgtcaagggggataaaggtgaagctggtcttccgggaatacctggaagcatggacacc atggacatggttagtctcaaaggccaaaaaggagatcctggagaaaaaggggaccttggt ccaacgggagaaaaagggttacgtggggagtatggagaaccaggaattccaggaagggat ggtgaacctggtactccgggacaaccaggaccaaaaggagatcagggccccccagggtac ccaggagatccaggaattccaggacaaaaaggatcagttggtgaaatgggtttgccagga acacctggagaaaagggtctgcctggaataccaggttcaccaggcacaccggggttccct gggcaaaaaggtgaaaaaggagacaaaggagcagcaggttttcctggaataggctttcca ggatctcctggtgagaagggtgaaccaggaagaacaggtagtccgggtttatctggagac aaaggtgaaaagggtaatgcaggaattccaggaatgccgggtgctccaggtcccaaagga tcccctgggattgcaggatttccagggagcccaggcctccatggagcaaagggtgaaaaa ggacttcctggcttaagtggtatcccaggtttaaaaggagaaccaggtgaacctggtgct cctggtcctgctggtgccattggtcagaagggtgaaccaggctatgatgggattccaggc acagctggtgcaaagggtgaacaaggtcttccaggtagaggacttccaggatttccaggt gcaaagggagataaaggtgcaaaaggtgaagtgggtttcccaggatccccaggaatccca gggattccaggtttaaaaggagaacaaggatatgctggcccaccgggccctaaaggcaac caaggtcttcctggactaccaggaagtgcaattgagggccctaaaggagatagaggaccc caaggccagcctggccttccaggtttaccaggtccaacggggccaccaggacctccaggt ctgaagggggctaaaggtgagcagggaagtgatggctggcctggaaatcctggaggtccg ggagataaaggtgatccaggtttccagggactgccaggtagtcctggtttgccaggaggt gctggtgagaagggtgatctaggacctccaggtgtaccaggtgttccaggtccaaaagga tctgcaggttttccaggcctcaagggtgagcgaggcgaccaaggacttcctggaatctta aagttttctattaattttccaggtttacaaggcccaccgggccccccaggtgcttttcag cttatcaaaggggatcctggcttacctggcccagtaggaccagttggtctcaaaggattc ccaggacttccaggtcccaaaggacagcaaggagtaacaggaccttcaggtgtacctgga ccacctggtagtccagggtttgatggcagacccgggcaaaaaggagaagttggtccttat ggtcccccaggacccagaggaatccctggtccacctggccctgaaggtttgcctggggct atgggcccaccaggtgcagcatctgttgctcatggcttccttgttaccagacacagtcaa accactgaagaaccacaatgcccatttggaaccaggctgatttaccatggctactctctg ctttacgtacaaggaaatgaaagagcacatggccaagatctaggcactgcagggagctgt cttcgtaaatttagtactatgcctttcctattttgcaacatcaacaatgtatgtaacttt gcatcgaggaacgactattcctactggctgtccactcctgaacccatgccaatgagtatg gcacccatcactggtgaaagtatcagaccattcatcagcagatgctctgtgtgtgaagct cctgctatggtaatagccgttcacagtcaaacaatccagataccaccatgtcctgaaggc tggagttccctttggattggttactcctttgtcatgcacaccagtgctggtgctgagggc tctggccaggccctggcgtctcctggttcctgcctggaagagttccgcagcgctcccttc attgaatgccatggccggggcacctgcaattattatgcaaatgcttacagcttctggctt gccactatagagaggaatgagatgttcaagaaaccgactccgtcaactctgaaagcaggg gatctgcgctcaaacgttagccgttgtcaagtctgtatgagaaatacataa

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