Coturnix japonica (Japanese quail): 107307958
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Entry
107307958 CDS
T04297
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107307958 (SOX1)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107307958 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107307958
NCBI-ProteinID:
XP_015706943
UniProt:
A0A8C2TWG1
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All DBs
Position
1:126006342..126009436
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AA seq
373 aa
AA seq
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MYSMMMETDLHSPGGAPAPGGGLSGQSGAGGGGGGGGGGGGKAGQDRVKRPMNAFMVWSR
GQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPR
RKTKTLLKKDKYSLAGGLLGAGPAAGGPPAVGVGMGVGVSPGGVGQRLESPGGAAGGGYA
HMNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGGGGHPHHPHPHHPHHPHNPQPMHR
YDMGALQYSPISNSQGYVSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGALG
SLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPGGEGGDPATAAAQSRLHSLPQHYQSA
GTAVNGTVPLTHI
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcgcccggcggagccccggcgcccggc
ggcggcctctcggggcagagcggcgcgggaggcggcggaggcggcggcggcggcggcggg
ggcaaagcggggcaggaccgcgtgaagcgccccatgaacgccttcatggtgtggtcgagg
gggcagcggcggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cggctgggggccgagtggaagctgctgtccgaggcggagaagcggcccttcatcgacgag
gccaagcggctgcgggccctgcacatgaaggagcacccggattataaataccggccccgg
cggaagaccaagaccctgctcaagaaggacaagtactcgctggccggagggctgctgggc
gccggcccggccgcgggcggccctcccgccgtcggcgtgggcatgggcgtcggcgtgagc
cccggcggcgtcgggcagcggctggagagccccggcggggcggcgggcggcggctacgcg
cacatgaacgggtgggccaacggcgcctacccgggctcggtggcggcggcggcggcggcg
gcggcgatgatgcaggaggcgcagctcgcctacgggcagcacccgggcggcggggggcac
ccgcaccacccgcacccgcaccaccctcaccacccgcacaacccgcagcccatgcaccgc
tacgacatgggcgcgctgcagtacagccccatctccaactcgcagggctacgtgagcgct
tcgccctcgggctacggcgcgctgccctacggctctcagccccaccagaactcggcggcc
gcggcggcggctgcggcggcggcggcggccgcctcgtcgggcgcgctgggcgcgctgggc
tcgctcgtcaaatcggagcccagcgtgagcccgcccgtcacctcgcactcgcgggccccg
tgccccggggacctgcgggagatgatcagtatgtacttaccgggcggcgagggaggcgac
ccggcgaccgccgccgcccagagccgcctgcactccctgccccagcactaccagagtgcc
gggactgccgtgaacggcaccgtccccttgacgcacatctga
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