Coturnix japonica (Japanese quail): 107308056
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Entry
107308056 CDS
T04297
Symbol
TBC1D4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107308056 (TBC1D4)
Membrane trafficking [BR:
cjo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107308056 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107308056 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
107308056 (TBC1D4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
Laminin_I
Motif
Other DBs
NCBI-GeneID:
107308056
NCBI-ProteinID:
XP_015707117
LinkDB
All DBs
Position
1:139069886..139171489
Genome browser
AA seq
1280 aa
AA seq
DB search
MEKPVEGEPLSHPLEQQPEAPPPPGEKRFRLWYVGSACLDRRTTLPMLPWLMAEIRRRGQ
RQEPGGALGGGVPAREVLLLLGSPTLRCVPAGPASPGPGRPASPAPAVFIFEHKAQHIAR
FIHNSHDLTYFAYLIKAQPDNPDSPMACHVFRATDPNQVPDVISSIRQVSKAALKEDTKP
SKDSEDAFYNSQKFEVLYCGKVTVAHKKAPSSLIDDCIEKFSLHERQRLKLLNEQRNNES
SLDLPLNEGNAPTSPLDSPFEELESPNTTTGHAVMFTIGSQNNLTNLASTRSFFPERILE
DSGFDEQQEFRSRCSSVTAVMQRRVHDANLKIQPRRRHASAPSHVQPSDSEKNRTMLFQV
GRFEVNLISPDTKSVVLEKNFKDISSCSQGIKHVDHFGFICRESVEPALSQYVCYVFQCA
SESLVDEVMLTLKQAFSTAAALQSAKTQVKLCEACPMHSLHKLCERIEGLYPPRAKLVIQ
RHLSSLTDNEQADIFERVQKMKPENDQEENELVILHLRQLCEAKQKTHVHIGEAPSTASN
SVIPENTTSGGRFKLDVLKNKAKKSLTSSLENIFSRGANRMRGRLGSMDSFERCNSLASD
KDASPGDSPPTTPPASPVSSAWQPFPEEDSDSPQFRRRAHTFSHPPSSSRRRITFQNGRS
LSARSPLLRQSTIEPTSPIVGIHRFHSESESASPGLPSSISAPSFLKTFYQGSGRLLQHS
ESDLSKSDGEGKKRASNICSNESLNAAGATLTPRRISWRQRIFLRVASPMNKSASKMQHP
DSLDGSELLPLSPLAPPLEEDPLLLVLQNEDGTDKTGERKNSEELQSLWRKAIHQQILLL
RMEKENQKLEEASRDELQSRKVKLDYGEVGTCQKDTINIWDKKLLNCRAKIRCDMEDIHG
ILKEGVPKSRRGEIWQFLAVQHRVRHRLPNKQQPPDVSYKELLKQLTAQQHAILVDLGRT
FPTHPYFSTQLGAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKF
LMYDLGFRKQYRPDMMSLQIQMYQLSRLLHDYHRDLYDHLEENEISPSLYAAPWFLTLFA
SQFPLGFVARVFDIIFLQGTEVIFKVALSLLSSQETAIMGCESFENIVDFLKTTIPDMTQ
PQMEKIITQVFEMDISKQLHAYEVEYHVLQDELQENVNLCDDGEPLEKLERANNHLKRQN
MDLLEKLQVAHARIQSLESSLETILTRENKMKTAIQSLEQEKITYQKTLEQIIKYLPTEA
LSDCELLLKEVNYNPNNKTK
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggagaagccggtggagggagagccgctctcccatccgctggagcagcagcccgaagcg
ccgccgccgcctggggagaagcgcttcaggctgtggtacgtgggctcggcgtgcctggac
cggcgcaccacgctgcccatgctgccctggctgatggccgagatccggcggcgcgggcag
cggcaggagcccggcggggcgctgggcggcggcgtgccggcccgcgaggtgctgctgctg
ctcggatcgcccacgctgcgctgcgtgcccgccggccccgccagccccggccccgggcgg
cccgccagccccgcacccgccgtcttcatcttcgagcacaaggcgcagcacatcgcccgc
ttcatccacaacagccacgacctcacctacttcgcctacctgatcaaggcgcagcccgac
aaccccgactcccccatggcctgccacgtcttccgggccaccgaccccaaccaggttcct
gacgtcatcagcagcataagacaagtctccaaagcagcactgaaagaagataccaaacca
agtaaggatagtgaagatgccttctataactctcaaaaatttgaggtcttgtactgtgga
aaggttacagtggctcacaagaaagctccctcatcattaattgatgattgcattgagaaa
ttcagccttcatgagcgtcagcgcctgaaactactcaatgaacagcggaataacgagtca
agtttggacttacctctgaatgaaggaaatgcaccaacttctccattggatagtccattt
gaggaattggaaagtccaaataccaccacagggcatgctgtgatgtttacaattggcagc
cagaacaacttgaccaacctggccagcacccgtagcttctttccagaacgaattttggag
gactctggcttcgatgagcagcaggaatttcgttcccgatgcagcagtgtcactgcagtt
atgcaaagaagggttcatgatgcaaacctgaaaatacagccacgtagaagacatgcaagt
gcacccagtcatgttcagccctcagattctgagaagaacaggacgatgttgtttcaggtt
ggaagatttgaagttaacctcatcagtccagacaccaaatcagtcgtgcttgaaaagaat
tttaaagatatctcttcatgttctcagggtataaaacatgttgatcactttggcttcatt
tgccgggaatctgttgaacctgcattaagccagtatgtttgctatgtgttccagtgtgca
agtgagtctctggttgatgaggtaatgcttaccttgaagcaagcctttagcactgctgca
gctcttcaaagtgccaagacacaggttaagctgtgtgaggcctgtcctatgcattcattg
cacaaactttgtgaaagaattgaaggactatacccaccaagagccaagctcgtaattcag
aggcatctgtcatcactaactgataatgagcaagcagacatttttgaacgtgttcagaaa
atgaagcctgagaatgaccaggaagaaaatgaacttgtgatcctacatctccgccaactc
tgtgaagctaagcagaaaacgcacgttcacattggtgaagctccatcgactgcgtctaac
agtgtgattccagaaaacaccaccagtggcggcaggtttaaacttgacgttctgaaaaac
aaggccaagaaatccttgactagctctctggaaaatatcttctcaaggggagccaacaga
atgcgaggccgcttgggaagcatggacagctttgagcgctgtaacagccttgcttctgac
aaagacgcttctccaggcgactctccaccgaccactcctccggcatccccagtgtcctca
gcctggcagccatttcccgaggaggactcagactccccccagttcaggagacgcgctcac
accttcagccaccctccctccagctctcggcggcggataaccttccagaacggccggtcc
ctgagcgcccgctccccgctgctgcggcagagcaccattgagccaacaagtcctattgtt
gggattcatcgctttcacagtgagagtgaatcagcatcacctggtctcccttcctctatc
tctgccccttctttcctgaaaaccttttaccagggctcaggaaggttgctccagcactca
gaaagtgacctctccaagagtgatggggagggaaagaaaagagcatcaaacatctgcagc
aacgaatctctaaatgcagcgggggccacactcacacctcgccgcatctcctggcggcag
agaatattcttgcgggtagcttcacctatgaacaaatctgcttccaagatgcagcatcca
gatagtcttgatggaagtgaattgttaccgctatcccctcttgctccacccttggaggaa
gaccctcttcttttagtactgcagaatgaggatggtacagataaaacaggagagaggaaa
aactcggaagaactacaaagtctgtggagaaaagccatccatcagcaaattctgttgctt
cgaatggaaaaagagaaccagaagctggaagaagcaagcagagatgagctccaatcaaga
aaagtcaaactggactatggtgaagttggtacatgtcagaaagataccataaatatttgg
gataagaagttacttaactgcagagccaaaatccgatgtgatatggaagatattcacggc
attttgaaagaaggtgtaccgaaaagtcgtcgaggagaaatttggcaatttttggctgtg
caacatagagtcagacacagactgccaaacaagcagcagcctcctgatgtctcttacaaa
gaacttctgaaacaattgacagctcagcagcatgccatccttgtagatttaggacggaca
ttccctacacatccttacttttctacccagctgggagcaggacagctatcgctctttaat
ctcctgaaagcatactctttgctggacaaggaagtgggttactgtcaaggtataagcttt
gtagctggagtgctgcttctacatatgagtgaggaacaggcttttgaaatgctgaagttc
ctcatgtatgaccttggcttccgtaaacagtacaggccagacatgatgtcactacagatt
cagatgtatcagctgtcaaggcttcttcacgattaccacagagacctctatgatcatctc
gaagaaaatgaaatcagccccagtctttatgctgcgccgtggtttcttacgctgtttgca
tctcagtttcctttgggattcgtagccagagtatttgacattatttttcttcaaggaaca
gaagtcatatttaaagtagcactgagtctacttagcagtcaagagacagctataatggga
tgtgagagttttgagaatattgttgattttcttaaaaccactattccagacatgactcaa
cctcaaatggaaaagattattacccaggtatttgagatggatatttcaaaacagctgcat
gcctatgaagtagagtaccatgtcctgcaggatgaactgcaggaaaatgtgaacctctgt
gatgatggtgagccactggagaagctggagagggcaaacaaccacctgaaaaggcaaaac
atggatttgttggagaagctacaggttgctcatgctagaattcagagtctggaatccagc
ctggagactattttgactcgagagaacaaaatgaagactgcaattcagtccctggaacag
gagaagataacatatcaaaagactcttgagcagataattaagtatttgcctacagaagca
ttgtctgactgtgaactgctcctgaaagaagtaaactacaatccaaataataaaacaaaa
taa
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