Coturnix japonica (Japanese quail): 107308077
Help
Entry
107308077 CDS
T04297
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107308077 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjo01009
]
107308077 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjo04515
]
107308077 (PCDH9)
Protein phosphatases and associated proteins [BR:
cjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107308077 (PCDH9)
Cell adhesion molecules [BR:
cjo04515
]
Cadherins
Protocadherins
107308077 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
MAP17
V_ATPase_I
RCR
EphA2_TM
Big_9
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
107308077
NCBI-ProteinID:
XP_015707151
LinkDB
All DBs
Position
1:142547252..143245124
Genome browser
AA seq
1225 aa
AA seq
DB search
MDLREFYLLAALIACLRLDSAVAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADVGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPFSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQALKFGDIP
KYLWEIWVPEKPWVSQRRVTFHLPDGSQESCSDSGLGDHEPVGGGTLISHPLPLVQPQDE
FYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGPYQ
QPKSPMSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGSSEGHFNTGNHMT
DIPLANLKSYKQVSGAAESPKEHQL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggaattttacttgttggccgctttgattgcctgtttaaggctggattct
gctgtagctcaagaacttatttatactattagagaggagctgcctgaaaatgtccccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtccaaagcaggggatgcccctctggtcaaagtgtccagt
accactggggagatctttacaacatcgaacagaatagacagagagaaactctgtgctggc
gcttcctatgcagaagaaaatgagtgtttctttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaagataaaaataattgtgaaggatactaatgacaatgcaccg
atgtttccatcccctgtcatcaatatctccataccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgatacaggtttcaatggtgtgcagcactacgag
ttgttgaacgggcagagtgtctttggcctggatattgtagaaactccagaaggagagaaa
tggcctcaactgattgtgcagcagaacttggatagagagcaaaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtaccccacagaaatccagcacagctatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtttttaaagagagtcaagtagaggttcat
ataccagagaatgcgcccgtaggcacttctgtaattcagcttcatgctacagatgcagat
gtaggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggttgatcacggttcagaggtccttagatcgg
gaagagactgctattcacaaagtgacagtgctggctagtgatggcagctctacaccagct
cgggcaactgtgaccatcaatgtcactgatgtaaacgataaccctccgaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtccccttccacctgaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaagctggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acgggagttttgacagcctccagagtttttgacagagaagaacaggagcgtttcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtgttggatgaaaatgacaacagtcccaaatttactcataatcatttccagtttttt
gtatcagagaacctaccaaagtatagcactgtgggggtgatcacggtgactgatgcagat
gctggggaaaacaaagcagtgaccctttccatcctcaatgacaatgacaactttgtgctg
gatcccttctctggagttataaagtccaatgtttcttttgatcgagagcagcagagctcc
tacacctttgatgttaaggcagttgatggaggacagcctcctcgctcttctacagcaaaa
gtgaccataaatgtcatggatgttaatgataacagccctgttgtcatctacccgccttct
aatacttcttttaagctggtgccactctcagcaattccaggatcagtggtagcagaagtg
tttgcagtagatattgacaccggaatgaacgctgaactgaagtacacaatagtgagtgga
aataacaaaggtttgtttcggattgatccagtgacaggtaacatcactctggaagaaaaa
ccaactcctaatgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatctttgcatactcttgtgcttgtttttttgtatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggaaacacctctggaccggaacata
ggagacagtagccaaccctatcaaaatgaggactatctcacaatcatgattgctattgtg
gcaggtgccatggttgtcatagtggtgatatttgtcactgttcttgttcgctgccggcat
gcatccagattcaaagctgcccagaggagcaagcaaggtgctgaatggatgtcccccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccgaagagttct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacccatc
aacgggacaataagccttccagcagagctggaagagcaaagtataggaagatttgactgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgaccttgccaagcattacaaa
tctgcctctccacagtctgcttttcatctcaaacctgacactcccgtttcagtgaaaaag
caccacgtgattcaggaactccctttggacaacacctttgttggtggctgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacaggcactgaaatttggagatataccg
aagtacttgtgggagatttgggtacctgaaaaaccatgggtgtctcagcgccgtgttaca
tttcacctccccgatggctcccaggaaagctgcagtgacagtggtctgggagaccacgag
ccggtgggtggtggaaccctgatctcacaccctcttcctctggttcagccgcaggatgag
ttctacgaccaggcctcaccggacaagaggactgaagctgatggcaactctgaccccaac
tcggatgggcctcttgggccaagaggattagctgaagctacagagatgtgtactcaagaa
tgcctggttttgggtcattcagataactgttggatgcctcccagcctgggtccataccaa
cagccaaagtctcctatgtctacctttgcacctcagaaagagtgggttaagaaggacaaa
ttagttaatggacacacactgaccaggacctggaaggaagatagcaacagaaaccagttc
agtgatcgaaagcagtatggttccagtgagggccatttcaacactggcaatcacatgact
gacattcctctggccaacttgaagtcttataaacaggtgtcaggagctgctgagagtcca
aaggagcaccagctataa
DBGET
integrated database retrieval system
