Coturnix japonica (Japanese quail): 107308089
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Entry
107308089 CDS
T04297
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107308089 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjo01009
]
107308089 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjo04515
]
107308089 (PCDH20)
Protein phosphatases and associated proteins [BR:
cjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107308089 (PCDH20)
Cell adhesion molecules [BR:
cjo04515
]
Cadherins
Protocadherins
107308089 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
RibLong
He_PIG
Motif
Other DBs
NCBI-GeneID:
107308089
NCBI-ProteinID:
XP_015707170
UniProt:
A0A8C2UAN5
LinkDB
All DBs
Position
1:144864499..144868631
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AA seq
942 aa
AA seq
DB search
MGCRGEERRRLGGGAGGRLGSSRRPGMGSPGGRSSPSARGSLQHLLLFLLFVGPFNCFAS
YSRATELFYSLNEGLPAGVLIGSLARDLRLPTTGGQRPAASQPPLSFTLASRGLGGQYVH
LDNRSGELHTSALEIDREALCMESSGSTVPGEADTVSLSSSSSPDSCLLLLDVLVLPQEY
FRLVKVKIAIRDVNDNAPHFPVPHIRLSVPENAPVNTRLAIEHPALDPDVGTNGVQTYRL
RDNYGVFTLDVEENESGERTPYLIVMGALDRETREEYVTVIIAEDGGTPPLVGSATLTIG
ISDINDNCPQFSDSQLNITLYGNSSLGTHVATVHAVDLDLGSNAQITYSYSQKVPQPSRD
LFHLDESTGVITLSSKVDGNTPRLHRLIILGNGPGCIPAVITVLVTIIKVMVRPPEVVPR
FIANEVEGVVYLKELEPINTPIAFFTIKDPDEKYKVNCYLDGDGPFRLSPYKPYNNEYLL
ETTKPLDYETQQLYEISVVAWNSEGFNVNKVIKVQVLDDNDNSPVFSQQLIEISIEENNV
PNAFLTKLHATDADSGERGEVSYFLGPDAPSYFSLDKTTGVLTVTTQLDREEKEKYRYTV
KAVDSGFPPRESIATVTITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTDADAG
QNGWVALSVLNGSDIFVIDTGKGVLRAKVSLDREQQSSYVLWIEAVDGGDPALSSTAKIT
ILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDKDTGMNAVIAYSIIGRRG
PRPESFRIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSN
ESYIESLLRKEPDINIEEKQPQISVEPTHKKMESASCMPTLVALSIISLGSITLVTGMGI
YICLRKGKKHHRADENLEVQIPLNGRINLHMLEKKPVEISNI
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgggctgccgcggggaggagaggcgccggttgggcggcggagcgggcgggcggctcggg
agcagccggcggcctggcatggggtccccgggcggtcgcagcagccccagcgcccgcggc
agcctgcagcacttgctcctcttcctgctcttcgttggaccattcaactgctttgccagt
tacagccgcgccaccgaactcttctacagcctcaatgaggggctgcctgccggcgtgctc
attggcagcctagcccgtgatctgaggctgcccacgactggggggcagcgccctgcagct
tctcagcctcccctctccttcaccctggcttctcgtggcttgggaggacagtatgtgcat
ctggacaaccgctccggagagctacacacttcggctttggagattgaccgggaggctttg
tgcatggagagcagtgggtccactgtccctggagaggcagatacggtatccttgtcctcc
tcatcctcgcctgactcatgcctgcttctgctggatgtgctggtactaccacaggaatac
ttccgtctggtgaaggtgaaaattgctatccgtgatgtcaatgacaatgctcctcacttc
cctgtgccccacatccgcctctcggtgcctgagaatgcacctgtgaacacccgcctggct
atcgagcaccctgcccttgaccctgatgtgggcaccaatggtgtccagacctaccgtcta
cgagataactatggtgtgttcaccctggatgtggaggagaacgaaagtggagagcggacc
ccctacctgattgtaatgggggctttggacagggagacacgggaggaatatgtcacagtc
atcattgctgaggatggaggcactcctccacttgtgggtagtgctacccttactattggc
atcagtgacatcaatgacaactgcccccaattcagtgactcacagctcaacatcactctt
tatgggaattccagcctgggaacacacgtggccactgttcatgcagtagacctggacctt
ggatccaatgcacaaatcacctattcctacagccagaaggtccctcagccatccagagac
ttgttccatctagatgaaagcacaggagtcatcacactatccagtaaggttgatgggaac
actccaaggcttcacagactgatcatattaggcaatggtcctggttgtatccctgctgtt
atcacagtgctagtgaccatcatcaaagtcatggtgaggccacctgaagttgtccctcgt
ttcatagctaatgaagtggaaggagtggtatacttaaaggaactggagcctatcaacaca
ccaatagcattttttaccatcaaagaccctgatgaaaaatataaggtcaattgctatttg
gatggtgatgggcctttcaggctttcaccatacaagccatacaacaatgaatacttgtta
gaaaccacaaaacctttagactatgagacacagcagctatatgaaatctctgtagtggca
tggaactctgaaggatttaacgtaaacaaagtaataaaagtacaagttttggatgacaat
gacaactcaccagttttctctcaacagctgatagaaatatcgattgaggaaaataatgtt
cccaatgctttcttgaccaaactgcatgctacagatgctgacagtggagaaagaggggaa
gtgtcctattttttagggcctgatgccccttcctatttttctttagataaaaccacagga
gttcttacagttaccactcaattggatagagaagaaaaagagaagtacagatatactgtg
aaagcagtagattctggattccctccaagagaatcaatagcaactgtcaccatcactgta
ctggataaaaatgataatagcccaagatttatcaataaggatttcagcttttttgtgcca
gaaaactttccaggttttggtgaaattggagttatcagtgtcacagacgctgatgcagga
caaaatggatgggttgctctttcagttctgaatggaagtgatatttttgtcatagatact
ggaaagggagttttgagagctaaagtctctcttgatagggagcaacaaagctcctatgtt
ctgtggattgaagcagttgatggtggtgatcctgccttgtcttctactgcaaaaataaca
atccttcttctagacataaatgacaacccccctttggtattgtttcctcagtctaatatg
tcttatctgttggttcttccttctacccttcctggctctcccatcactgaggtctatgct
gttgataaggacactggcatgaatgcagtcatagcatacagcatcataggaagaagaggc
ccccgaccagagtcatttaggattgaccctaaaaccggtaatatcaccttggaagaatca
ctcatgcaaaatgactatggtctgtatcggctgcttgtaaaagttagtgatcatggctat
ccagaaccactccattccactgtcatggtgaatctttttgtcaatgacactgttagcaat
gagagctacattgaaagtttgttaagaaaggagcctgatatcaatatagaagagaagcag
ccacaaatatctgtagaacctacacataaaaaaatggagtcagcatcctgcatgcctact
ttagtagctctgtcaataataagtttgggttcaatcactttagtaactgggatgggcatt
tacatctgtctaagaaaagggaaaaagcaccacagagcagatgaaaacttggaagtacaa
atccctttaaatggaagaattaacctgcacatgttggagaagaaaccagtggagatttct
aacatttga
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