Coturnix japonica (Japanese quail): 107308300
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Entry
107308300 CDS
T04297
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X3
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107308300 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107308300 (SPATA13)
Membrane trafficking [BR:
cjo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107308300 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
DUF5560
Motif
Other DBs
NCBI-GeneID:
107308300
NCBI-ProteinID:
XP_015707578
UniProt:
A0A8C2Y5D1
LinkDB
All DBs
Position
1:158521290..158651655
Genome browser
AA seq
1349 aa
AA seq
DB search
MFRVTFNVVTEKVTFTLAACPSVTWKAVQPEELNSAGERGSKRSLSATDVGQAARAAAGD
GNVAVSCPSLQLHAIEGMTTFQNGYGNSNAIACIVMDNKEPPNLTTSVSHNGGYSTSGCC
EEETQDEKISPSKIMRFFSTPRKRANSSSDRPRSLILMGNSSTWNALSSIRKMGSFKKLK
SSVLQGIQAKECPDILNENGVGKHNSNGAVVRVQTNRFSYSGPMQDFQSAVDGLVSDCSD
AEEGDESFLRNTHRSRSIRRAYGAGRINLLDTDKAQSHHNGTRATSPVLAEPKICEILVK
DSENNRIIYRRSKSSDNLNFLKKSSFKRKSTSNLTDLKAANEKQMPARTVSVTSADSDKT
NGNPERRSKRWKSPIRAKDFDRVLKLVSNVTDVAWKKDGSKSTAPSPSEPSQRTRSNSRL
HDDYSRRVSSSTDHDRKRCTSSASSLDSSSPGTPCLQSPVAAQDKEAEMDVARAEDKNLS
TSSGIAESDLLSPTLSDIGPFPNEVFDTDSDEPKASQQFACDAEHPHIPVRPTAPKPQSP
STEKMMCNMDFQCSNHHSTLSLSSTESEERGEVGPKLSRNPVCFQDTVQTVYYDDGNEDS
GISSHSQLSLNLAPGAEEKKEEVVSDDHWKKSSSQDEEKTDTQRVTPRRWGSGKRSRPRP
LSDYGQMSIRSISIPEDSVAVESQKTDCMDGENQPGLAPVGSVIQSNTVGYSRGRKRRPI
SVIGGVNFYGSGPAEEIEGLLTQPTTRPPVPAHQVPPYKAVSARFRPLTFSQSTPIGLDR
VGRRRQMRTSNAAADGGTESSALVDDNGSEEDYSYEEICQATPRYLQPGGEQLAINELIS
DGSIVYAEALWDHVTMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRV
NQEELPENCSSIQDEEQDADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDICEG
YIRQCRKHTGMFTTAQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQ
EGFAIYSEYCNNHPSACIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICK
YPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWE
GPDVLARSSELIHSGELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMD
EMELVDAEDGRDKDFNINVKNAFKIINRATEEVHLFCAKKQEDKKRWMEACESERRRVQE
DKEMGMEISENQKKQAMQNARKSRHGKMKGVSYNGCPVPPLHQSLHPIHQRHITVPTSIP
QQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtgtcaccttcaatgtagtgacagagaaagttaccttcaccttggcagcctgc
ccctccgtcacatggaaggcggtgcagccggaggagctcaactcggctggtgaacgtggg
agcaagaggagcttgagtgcaacagatgtgggtcaggcagcgagggcagctgccggggat
ggcaacgtggctgtaagctgccccagcctccagctccatgccatcgagggcatgaccaca
tttcagaatggctatgggaacagcaacgccatcgcttgtatcgtgatggataataaggag
cctccgaacttgacgacctctgtcagtcataacggggggtacagcaccagtggatgttgt
gaagaggaaacacaagatgagaaaatcagcccttccaaaatcatgcgcttcttctccacc
cctcggaaacgagcgaattccagctctgacaggcctcgctctctcattttgatgggcaac
tcttccacgtggaatgctttatcttccatcaggaaaatgggatctttcaagaagctgaaa
tcatctgttctgcaagggattcaagcaaaggagtgccccgatatccttaatgagaatggt
gtaggcaaacacaactcaaatggggcagtggtgagagttcagactaacaggttttcctat
tcggggcctatgcaggatttccagagtgcagtggatggtttggtgtccgactgctctgat
gctgaggaaggtgatgagtccttcctgaggaacactcaccgctcacgcagcatccgacgg
gcttatggtgccggccgcatcaacctgctcgacacggataaggctcagagccaccacaac
ggcaccagagcaacatctcctgtccttgcagagccaaagatctgtgagattttggtgaag
gactcagaaaacaacaggatcatctatcggagaagcaaaagttcggataacttgaacttt
ctgaaaaaaagctcgttcaaaaggaagtccacctcaaacctgaccgacctcaaggctgcg
aatgaaaaacagatgccagcaaggactgtgagcgttacttctgctgactcagacaaaaca
aatgggaaccctgagaggagatccaagcgatggaagagccccatcagggcaaaggatttt
gaccgagttctgaagcttgtcagtaatgttacagatgttgcatggaagaaggatggctct
aagagcacagctccttctcccagtgagccgtcccagagaacaaggtcaaacagcagactg
catgatgactactcccgcagggtttccagtagcacagatcatgacagaaagaggtgcacc
tcctcagcatctagtctagattcttcatcaccaggaacaccttgtctacaaagccctgtg
gctgctcaggataaagaggctgaaatggatgtagctcgtgctgaagacaaaaacctcagt
acatcttcaggtatcgcggaatctgatttattgtcccctactctgagtgacatcgggcca
tttcccaacgaagtgtttgatacagactcggacgaaccaaaagcctcccagcagtttgca
tgtgatgctgaacatcctcacatccctgtcaggccgactgctccaaaacctcaaagcccc
agcacggagaagatgatgtgcaatatggatttccagtgctcaaaccatcatagcacactg
tcgttgagctccacggagagtgaggagagaggtgaggttgggccaaagctgagcaggaat
cctgtctgcttccaggacactgtgcaaaccgtgtactatgatgatggaaatgaggacagt
ggcatcagcagtcactctcagctgagcctcaatttagcccctggtgcagaagaaaaaaag
gaagaggttgtttctgatgaccattggaagaagtcctcatcccaggatgaagaaaagaca
gacacgcaaagggtcacgcccaggagatggggctctggaaaaaggtctcggcccagacca
ctctcagactatggccaaatgtcaatcagaagtatctctatacctgaagattcagttgct
gtggagtcgcaaaagacagactgcatggatggagaaaatcagccaggactggctcctgtt
gggtctgtgatccagagcaatacagtaggctactccagagggcgaaaaagaagacccatc
tctgtaataggtggggtcaatttctatggaagcggtccggcagaagaaattgaaggtctg
ctgacacaacccaccacgcggccgcctgtccccgcacaccaggtgcccccctacaaagct
gtctctgccaggttccggcccctcaccttttcacagagcactcccattggcctggaccgc
gttgggcgacggcggcagatgagaacatctaatgctgctgcagatggcgggaccgaatct
tcagcattggttgatgacaatggcagcgaggaagattacagctacgaggagatctgccaa
gccacaccaaggtacctgcagcctggaggggaacagctcgccattaatgagctgataagc
gatggcagcattgtctatgcagaagctctctgggaccacgtcactatggatgatcaagag
ctgggcttcaaagctggagatgtcatcagagtcctggaagcttccaacaaagactggtgg
tggggaagaaatgaggacaaagaagcctggtttccagctagctttgtcaggctgcgagtt
aatcaggaagagctgccagaaaactgcagtagtatccaggacgaagaacaagatgcagat
attagcaagcatcgtcagaaaatagctgaaaacaaggatcagatgagaaccaacgttata
caggaaatcatgaacacagaacgagtctatatcaagcatctcaaggacatctgtgagggt
tacattcggcagtgtcgcaaacatacaggaatgttcaccacagcccagctcagcaccatt
tttggaaatattgaggatatttacaaattccagagaaagtttctgaaggatcttgagaaa
cagtacaacaaagaggagcctcatctgagcgagataggatcgtgctttctccaacatcaa
gaaggctttgctatttattcagagtactgtaacaatcatcccagtgcctgcattgagctt
tccaaactaatgaaacaaggcaaataccgtcacttctttgaggcctgtcgcttgcttcag
cagatgattgacattgccatagatggtttcctactgacaccagtgcagaagatctgcaaa
taccccctgcagctcgcagaactgctcaaatacaccacgcaggagcacagtgattataac
aacataaaagctgcttatgaggctatgaagaatgtggcatgcctaatcaatgagcgaaaa
cgaagattggaaagcatagacaagattgcacgttggcaagtgtctatagtagactgggag
ggaccggatgtgttagccagaagctcagaactgatccactcaggagaactgaccaaaata
tcaaagcaaggcaaaagccagcagaggactttcttcctctttgaccatcaacttgtgttc
tgtaagaaggaccttctgagaagggacatcttgtattataaggatcgtattgacatggat
gagatggaacttgtggacgctgaggatggcagagacaaagactttaacattaatgtcaag
aatgcttttaagataataaacagagcgacagaagaggttcatttgttttgtgcaaaaaag
caagaggataagaagaggtggatggaggcatgtgaaagtgaaaggagaagagttcaagaa
gacaaggaaatgggaatggaaatctcagaaaaccagaagaaacaagccatgcagaacgcc
cgtaagtcaaggcatgggaagatgaaaggtgtaagctataatgggtgtcctgtgcctcct
ctacaccagagcttgcatcccatccatcagcgccacatcaccgtgcccaccagcatccca
cagcagcaggtctttgccctggcagaacccaagcggaagccatcccttttctggcatacc
ttcaacaaactcaccccattcaaaaagtga
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