Coturnix japonica (Japanese quail): 107308328
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Entry
107308328 CDS
T04297
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cjo03037
]
107308328 (IFT88)
Cilium and associated proteins [BR:
cjo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
107308328 (IFT88)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_19
TPR_7
TPR_8
TPR_14
TPR_6
TPR_16
ANAPC3
TPR_11
TPR_17
TPR_10
TPR_9
ARM_TT21_4th
ARM_TT21_5th
TPR_15
TPR_CcmH_CycH
ARM_TT21_C
Consortin_N
DUF2989
TPR_21
ARM_TT21_2nd
HAT_PRP39_C
DUF6584
Coatomer_E
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
107308328
NCBI-ProteinID:
XP_015707651
UniProt:
A0A8C2Y5H6
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All DBs
Position
1:complement(159971737..160001658)
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AA seq
818 aa
AA seq
DB search
MMQNVHLAPEEDEDDLYSGYNDYNPTFDTEDLENDVAFQQAARTSHGRRPPVTAKVPGTA
TSRPIDTAFGSKATLTSSMGRPVTGVVQDGVARPMTAVQAAGYTKAAMRGSLFDPLGQAR
GPAPPLEMKNPDSSEEKIRQLEKKVGELIEESCIANSCGDLKLALEKAKEAGRKERVLVR
QREQTGTSDNINLDLTYSVLFNLATQYAANEMYAEALNTYQVIVKNKMFSNGGRLKVNMG
NIYLKQRNYSKAVKLYRMALDQIPSVHKEMRIKIMQNIGVAFIKTGQYMDAISSFEHIMS
MSPNLKAGFNLIVCYFAVGDGEQMKKAFQKLIAVPLEVDYDDKYISPNDDPHTNLLIEAI
KNDSLRHIERERKSMAEDYIMTAAKLIAPVIETSFAAGYDWCVEAVKASHYVELANDLEI
NKATTYLRQRDFNQALETLKMFEKKDSRVKSAAATNLSFLYYLENELTQATNYADLAVSS
DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNLGLTYKKLNRIDEALD
CFLKLHAILGNSAQVLHQIADIYEVMEDPNQAIEWLMQLISVVPTDPHVLSKLGKLYDNE
GDKSQAFHYYYESYRYFPSNIEVIEWLGAYCIDTQFCEKAIEYFERAALILPTQVKWQLM
VASCYRRSGNYQKALEKYKVIHQKFPENVECLRFLVRLCTDLGLKEVQEYMTKLKKVEKL
KEMREQRIKSGRDGSARNRREGSAGGDAGGSKGERLSAKLKALPGTSEPYESSSGKEIDA
SYIDPLGPQAERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaacgtgcaccttgctcctgaggaagacgaagatgatctttactctggctac
aatgattataatcccacttttgacacagaggatttagaaaatgatgtagcttttcaacag
gcagcaagaacaagtcatggtagaagaccccctgtaacagccaaagttcctggtacggca
acttcaagacctatagatactgcatttgggtcaaaagcaactttaacttcatctatggga
agaccggtgacaggagtagtgcaggatggggttgctcgaccaatgacagcagtgcaagct
gcaggttacactaaagcagctatgagaggttctttatttgatcctctgggtcaagcaagg
ggtcctgctccacctctggaaatgaaaaatccagacagctcagaagagaagattagacag
ttagaaaaaaaagtgggtgaactgattgaagaaagttgcattgccaacagctgtggagac
ttgaaattggctctggaaaaagcgaaagaagctggaagaaaggaaagagtattagtgagg
caacgtgagcaaactggtacttcagataacatcaacttagatctcacttactcagttctt
ttcaatctggccactcagtatgctgctaatgaaatgtatgctgaagcactgaatacttac
caagttatagtgaaaaataagatgttcagcaatggaggtagactgaaggtcaatatggga
aacatatatttaaaacaacggaactattccaaagctgtcaaattgtaccgcatggctcta
gaccagattcctagtgtccacaaagaaatgaggattaaaataatgcaaaatattggagtt
gcatttattaaaactggccaatacatggatgccatttcttcatttgaacatataatgagc
atgtccccaaacctgaaggcaggcttcaacttgatcgtatgttactttgctgttggagat
ggtgaacaaatgaaaaaagcattccaaaaactgattgctgttcccttggaagtggattat
gatgacaaatacatttcaccaaatgatgatccacatacaaatctgctgattgaagccatc
aaaaatgacagtttaagacatatagaacgtgagaggaaatccatggcagaggattatatc
atgacagctgctaaactgatagcaccagtaattgaaacatcttttgctgcaggctatgac
tggtgtgttgaagcagtaaaggcttcccactacgtagagctagccaatgacctggagata
aataaagccacgacttatttgagacaacgggattttaaccaggctctggagactttaaaa
atgtttgaaaagaaggatagcagagtaaagagtgcagctgcaacaaacctttcattcctt
tattatttggagaatgaattgacacaagcaacaaactatgcagatttagctgtcagttct
gatcggtacaacccagcagctctaactaacaaaggaaatactgtttttgcaaatggagac
tatgaaaaagcagctgagttttataaggaagctctcaggaatgattgctcttgcactgaa
gcactttataaccttggtttaacatacaagaaattaaacagaatagatgaagctttggat
tgttttctgaagctccatgcaatacttggaaatagtgcccaggttcttcaccaaatagca
gacatttatgaagtcatggaagatcccaatcaagccatagagtggctcatgcagttgatc
agtgtagtaccaactgacccacatgtactttcaaagctagggaaattatatgacaatgaa
ggtgacaaatcccaagcctttcattattactatgagtcgtaccggtatttcccttcaaac
attgaagtcattgaatggctcggagcatattgcattgacacccagttttgtgaaaaagcc
attgagtactttgaaagagcagcacttatcctacctacacaagtgaagtggcagctgatg
gttgccagttgctatcggagaagcggtaactaccagaaagctctagagaaatacaaagtc
attcaccaaaaattcccggagaatgttgaatgcctccgatttttagttcgtctctgcaca
gatttgggactgaaagaagtccaagaatatatgacaaaactcaagaaagtggaaaaatta
aaggagatgagagagcagcgcattaaatctggcagagatggcagtgcacgtaaccgcagg
gaaggaagtgctggtggagatgctggtggtagcaaaggggaaagactgagtgccaaacta
aaagctttgcctggaacaagtgagccctatgaaagcagcagcggtaaagaaatagatgct
tcctacatagacccgcttggcccacaagcagaaagacctaaaactgcagcaaggaagaga
acagaggaagatgactttgctgatgaagaactgggagaggatttgcttccagaataa
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