Coturnix japonica (Japanese quail): 107308593
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Entry
107308593 CDS
T04297
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03013
Nucleocytoplasmic transport
cjo05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107308593 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107308593 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjo03019
]
107308593 (NUP98)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107308593 (NUP98)
Messenger RNA biogenesis [BR:
cjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107308593 (NUP98)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107308593 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
107308593
NCBI-ProteinID:
XP_015708073
LinkDB
All DBs
Position
1:174377637..174409933
Genome browser
AA seq
1813 aa
AA seq
DB search
MFNKSFGTPFGGNTGFGTTSTFGQNAGFGTSGGGAFGTSAFGANNNTGGLFGNTQAKPGG
LFSSNAFNQPATSSTSTGFGFGTSTGTSSSLFGTTSTGGGLFSSQSNAFAQSKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGNPSGSLFGPTSFTAAPTGTTIKFNPPTGTDSMVKSGVST
TINTKHQCITAMKEYESKSLEELRLEDYMANRKGPSNPVGAGATTGLFGTSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTTTTGFGTGTTGGLFGQQTQTTSLFNKPFGQATTTQNTG
FPFGNTSTLGQPNTSTMGIFGATQPSQPGGLFGTAATTNAGTAFGTGTGLFGQTNTGFGV
GGSTLFGSKPAGFGTTTTSTSFGTTTGGGLFGNKPTLSLGTNTNTSNFGFGANNAGNSLF
GNKPATGTLGTGLGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFG
APQPAVALTDPNASAAQQAVLQQHLNNLTYAPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGVFMPKKSIKKL
VLKNLSGSSLFSPVNRENDDLASPSEYPENGDRFFLSVPPDENHRQDGEREEEEDHHEVT
RFYTNPIAKPIPQSPENTAHKHQNSADDTIVALNPRAALRNGLEGSSEDASFHDDSLHDE
REEETETVHHVHPAGIVLTRAGYYTIPPMEELARFINDRNECIVTDFTIGRKGYGSIFFE
GEVNLTNLNLDEIVHIRRKEVIVYPDDEKKPPIGEGLNRRAEVTLDGVWPTDKTSRSLIK
SPERLAEMNYEGRLESVSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPLK
VEAKKLKTTPVPPPGHLPPQQMALNGKPTPPAQSPEVEQLGRVVELDSDMADVTQEPPQE
PAVEDSMAEEQEAVPASAHIASTLGINPHVLQIMKASLLADDDDLDLILDHHSGKQPAKM
DTSQEICSPRLPISRSQGQKRCSVAGLLQSRFADAIFQPPSTALYDLKEPRTRSSPSPAC
WSASSPLASAFAVPPSVPEVQMKTVGVRRQQGLVPLENSITYQKGKLLMDMALFMGRAFR
VGWGPNWTLVNCGDQLSGSSGTEELPCEDVEYGFLPTPVTPKLLSESPFKVHVEKLNLEQ
RKMNRDKQLYLIPLEIKLKHSTVHMDEQCPLLAPNPGVSAIHDYADWVRTASEDPAVMET
VVKHWALTWTLCEAIWGNLKELEASLEEPSEYVLALERRRAFSRWLSETAAARIDEEVAL
TQHHSHVEAVFSCLTGRRIGEACRLAQQAGNHRLALLLSQLVGSQPTRDLLTMQLVDWHR
LQADCFIPEERLRIFALLAGKPVWQLSERISVNVCSQLDWKRCVAIHLWYLLPPTASISQ
ALAMYEAAFQTTSESEKYACCPLPPYLEGSGCVIEEDDNAGRPLRDVCFHLLKLYSDRHY
DLDQLLDPRSVTSDPVDYRLSWHLWEVLRALNYSHLCRQGQGVLNASYAAQLESEGLWEW
AVFVVLHEPDTHIREKAVRELLGRHCTLCETPESWAKETFLTQRLCVPAEWIHEAKAVRA
RMEGDKHKEALFLFKAGHWNQCHKLVVRHLASDAIINEDYKYLKGFLEDLSPPERSSLIQ
DWELAGLVYLDYIRVIEMVDRIQQLDCSTYELERLHTKVTSLCNRIEQIQCHNARDRLAQ
SDMAKRIANLLRVVLSLQHSPEPLAEGSPELHRVPLRLLAPHVGRLPMPEDYALEELRGL
TQSYLRELTVVTQ
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatccttcgggactcctttcgggggtaacactggctttggaacaacatcg
acttttggacaaaatgctggctttggtacttcaggtggaggagcctttggcacatcagcc
tttggggcaaacaacaacactggaggcctctttgggaacacccaggcaaagccaggaggg
ctcttcagttcgaacgcctttaatcagccagccacctcctctaccagcactggctttggg
tttggaacatccactgggacatccagcagcttgtttggtaccaccagcaccggtgggggc
ctcttctcatctcagagcaatgccttcgcacagagcaagcctgctggcttcggaaacttt
ggcacaagtaccagcagtggaggtctctttggaaccaccaacaccacttccaatcccttt
gggaatccatctggctctctgtttggcccaaccagctttactgcagctccaactggcaca
accattaagttcaatcccccaactggtacggatagtatggtcaagtctggagttagcacc
actatcaatacgaagcaccaatgcattactgctatgaaagagtatgagagcaaatctcta
gaggagctgcgtttagaagactacatggcgaacaggaaagggccctcgaatcctgtggga
gcaggagccactacaggcttgtttgggacttccactgctacttcaagcacagctacggga
ctttttggctcttctaccactaatacaggcttctcatatggacagaataaaactgctttt
ggaactactacgactggctttggaacaggaacaacaggaggcctttttggtcagcagact
caaactacaagtctgtttaacaaaccatttggtcaagctacgacgacgcagaacacaggc
tttccctttgggaataccagcactctaggacagccaaacacaagcacaatgggtatcttt
ggggccactcagccctcgcagcccggtggcctttttggaacagcagccacaaccaatgct
ggcactgcctttggaacaggaaccggtctttttggacaaacaaacacaggatttggtgtt
ggcggttcgaccctgtttggtagcaaacctgctggatttggaaccaccacgaccagtacc
tcgtttggtacaaccactggaggcgggctctttggtaacaaaccaaccctgagtttagga
accaatacaaacacttccaattttggtttcggtgccaacaatgctggaaatagcttgttt
ggaaacaagcctgcaacagggaccctgggaactgggcttgggacggggtttggaacagca
ctcggggctggacagacttcgttatttggaaacacccagcctaaacttggtgggacactg
ggaacaggagcctttggagcaccaggattcaatacctccactgctactctgggcttcgga
gcccctcagcctgctgtagcactgacagatcctaatgcatcggctgctcagcaggcagtt
ctccagcagcacctcaataatttgacttatgcaccctttggagattctcctctcttcaga
aaccccatgtcagacccaaagaagaaagaggagcggctgaaaccaaccaaccctgcagct
cagaaggccttaacaacacccacccactacaaactgactccacgtccagcaaccagagtg
cgcccaaaggctttgcagtctgcaggctctgccaagtctcaactctttgatggcctcgat
gatgatgagccatccctatccaatggtgtcttcatgccaaagaagagcatcaagaagttg
gttttgaagaacctcagtggcagcagtctgttctctcctgtcaatcgtgagaatgatgac
ctggcatctccatcagagtacccagagaatggagacaggttctttttgtcggtaccccct
gatgaaaaccacagacaagatggtgagcgcgaggaggaggaggatcaccacgaagtgacg
aggttttacaccaaccccattgccaagcccatcccacagagccctgagaacactgcacac
aaacaccagaacagtgcggatgacaccatcgtggccctcaacccacgggcagccctgagg
aacggcctggagggcagcagtgaggatgcctcattccatgatgattccctccacgatgaa
cgtgaagaagagactgagacagtgcaccacgtccatcctgcaggaattgttctaaccaga
gctggctattacaccatcccacctatggaggagctggccaggtttatcaatgacagaaat
gaatgtattgtgaccgacttcaccataggccgtaaaggttacggatcgattttctttgaa
ggagaagtaaatctaacgaacctaaatctggatgagatcgtccatatccgcaggaaagaa
gttattgtctacccagacgatgaaaagaaaccacctattggtgaaggccttaatagacga
gctgaagttacattagatggagtttggcctacggataaaacttctcgtagcttgataaaa
agcccagaacgactggcagagatgaattatgagggcagactggagtctgtatctcggaag
cagggcgctcgcttcaaggagtaccgccctgagactggatcttgggtgttcaaggtggca
cacttctccaagtacggcttacaagattccgatgaggaagaggaagagcatcctttaaaa
gtggaagcaaagaagttaaaaaccaccccggtgccacctccaggccatctaccaccccag
caaatggctttaaatggcaaaccaacgcctccagctcagagccccgaggtggagcagctg
ggcagggtcgtggagctggacagtgacatggcagacgtcacccaggagcctccccaggag
cctgcagtggaggacagcatggcagaagagcaggaggcagtgcctgcatctgctcacatc
gcctcgacgctgggcattaacccccatgtcttacagattatgaaagcttccttgcttgct
gatgacgacgacctggatttaatcctggaccatcactctggaaagcaacctgctaaaatg
gacacttctcaggagatctgttctccaaggctccctatatcaagatcccaaggacagaag
agatgctcagtcgctgggctgctgcaatcaaggtttgctgatgctattttccaaccaccc
agcactgctctgtatgacctcaaggagccgaggactcgcagctccccttcccctgcttgc
tggtcagcatcctctccattagcatcagctttcgccgtccctccgtcggtccccgaggtg
cagatgaagacagtgggtgtccgcaggcagcagggcttggtccccctggagaactccatc
acttaccagaaggggaagctgctgatggacatggctctgttcatgggtcgtgccttccgc
gtgggctggggccccaactggactcttgtcaattgtggggatcaactgagtgggtcgagc
gggacggaggaacttccgtgtgaggatgtggagtatggattcctgcccacccctgttact
ccaaaactactctcagaatcccctttcaaggttcatgtggagaagctgaacttggaacaa
aggaagatgaacagagacaaacagttgtatcttatccctctggagataaagctgaagcac
agcactgtccatatggacgaacagtgtcctctcctggctcccaatccaggagtttctgct
atccatgactatgctgactgggtccgaacagcatccgaggatcctgccgtaatggagact
gttgtgaagcactgggccttgacatggactttatgtgaagccatctgggggaacctgaag
gagctggaggccagcctggaggagcccagtgagtacgtcctggccctggagcgcaggagg
gctttctctcgttggctgtcagagacggctgcagcaagaattgatgaggaggttgctttg
acccaacaccacagtcatgttgaggccgtgttcagctgcctcacagggaggaggattggc
gaggcttgcaggctggcacagcaggcaggcaaccaccggctcgccctgctcctgtcccag
ctggtgggcagccagcccacacgggacctgctcaccatgcagctggtggactggcacagg
ctgcaggcagactgcttcatccccgaggagcgcctgcgcatcttcgcactgctggctggg
aagcctgtatggcagttgtctgagagaatcagcgtcaatgtgtgctcacagctggactgg
aagcgctgtgtggccatccacctctggtacctccttcctccaacagcttctatctcccag
gcacttgctatgtacgaggcagcatttcagaccacatcagagtctgagaaatacgcctgc
tgccccctgcctccttacctggaaggctctggttgtgtcattgaagaagacgataatgca
ggaagacctctcagagatgtctgcttccatttgttaaagctctacagcgacaggcactac
gacctggaccagctgctggatcccaggagtgtaacatctgaccccgtggactatcgcctc
agctggcacctgtgggaggtgctccgtgccctcaactacagccacctgtgcaggcagggg
cagggtgtgctgaatgccagctatgctgcccagctggagagcgaaggcctgtgggagtgg
gctgtgtttgtggtgctgcatgagcccgatacccacatacgtgagaaggccgtgcgtgag
ctgctgggccggcactgcactctatgcgagacccccgagtcgtgggccaaagagaccttc
ctgacacagcggctctgcgtccctgcagagtggattcatgaagcaaaggctgttcgagcc
cggatggagggcgacaagcataaagaagccctgttcctgttcaaggctgggcactggaac
cagtgccacaagctggttgtgcggcacctcgcctcagatgccattattaatgaagactac
aaatacctgaaggggttcctggaagatctctcccctccggagcgcagctcactcatccag
gactgggagctggcagggctggtctacctggactacatccgagtcattgagatggtggac
aggattcagcagctggattgttccacatacgagctggagcgtttgcataccaaagtgacg
tcgctgtgcaacaggatagagcagatccagtgccacaacgccagggaccgcctggctcag
tcagacatggccaagcgcatcgccaacctgctgcgcgtggtgctcagcctgcagcacagc
ccagagccgctggctgagggcagccccgagctgcaccgtgtgcccctccgcctgctggca
ccgcacgtgggccgcctgcccatgcccgaggattacgccctggaggagctgcggggcctg
acacagtcctacctgcgggagctgacggttgtcacgcagtga
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