KEGG   Coturnix japonica (Japanese quail): 107308776
Entry
107308776         CDS       T04297                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    107308776 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cjo03400]
    107308776 (WDR48)
DNA repair and recombination proteins [BR:cjo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     107308776 (WDR48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_HPS5 RAWUL WD40_like Nucleoporin_N Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 107308776
NCBI-ProteinID: XP_015708381
UniProt: A0A8C2TFE3
LinkDB
Position
2:complement(4657968..4677173)
AA seq 678 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVATTKSSVNKWTLKGIHNFRASGDYDNDCTNPIPPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHIN
PMDEEENEINHTVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETES
MLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEH
VYEKIINLDNESQTTSSSNNEKAGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKH
FIWKSGGDLTLHYRQKST
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcggcgcatcaccggcagaacacggcggggcggcggaaagtgcaggtctcctatgtg
attagagacgaggtggagaagtataaccgaaatggagtaaatgcacttcagctggatcca
gcattaaatagactcttcactgcaggccgagactctattataaggatatggagtgtcaat
cagcacaagcaagacccttatattgcatctatggaacatcacacagattgggtaaatgat
attgtactctgctgcaatggtaaaacattgatatctgcttcttcagatactactgttaaa
gtgtggaacgcacataagggattttgcatgtcaacactaaggacacataaggattatgtg
aaagccttagcatatgcaaaagataaagaactggtagcatctgccgggctggacagacag
atattcctctgggatgtaaatactctaacagcactgactgcctcaaacaacactgtcaca
acttcttccctgagtgggaacaaagattctatctatagccttgcaatgaatcaaatggga
acagttattgtctcggggtccactgagaaggttctccgggtgtgggatccaagaacttgt
gcaaaactgatgaaactcaaagggcacacggacaatgtaaaagctttgctgttgaacaga
gatggtacccagtgtctttcaggcagttctgatgggactattcgtctgtggtcccttggg
cagcagagatgtatagccacatatcgagtccatgatgaaggtgtttgggctctgcaggtc
aatgaagcattcactcatgtttattcaggaggaagagacaggaagatttattgtacagat
ttacggaatcctgatattcgtgtgcttatctgtgaagaaaaggcaccagttcttaagatg
gaacttgatagatcagctgatcctcctccagcaatttgggttgcaacgactaaatcctct
gtgaataaatggactttgaagggaatacataattttagagcatctggggactatgataat
gattgtaccaatcctataccacccctatgtacacagcctgaccaagtcataaaaggaggt
gctagtatcattcaatgccacattcttaatgacaagaggcacatattaaccaaagacaca
aataataatgtggcatactgggatgtcttaaaagcatgtaaagttgaagaccttgggaaa
gtagattttgaagaggaaatcaagaagagatttaaaatggtgtatgtgccaaactggttc
tcagtagacttgaaaactgggatgctgacaattacattggatgaaagcgactgctttgca
gcctgggtttcagcaaaagatgctggattcagcagtccagatggttctgatccaaaattg
aaccttggagggcttctattgcaagcgcttctggagtactggcctagaacacacatcaat
ccaatggatgaggaagaaaacgaaataaatcacacagtgaatggtgagcaggagaacaga
gtccagaaaggaaatggatattttcaagtaccaccacatacaccagttatatttggtgag
gctggaggacgcactttgttcaggttattgtgtcgggattcaggtggtgaaacggagtct
atgcttctgaacgagactgtgccacaatgggtgattgatatcactgtggataaaaacatg
cccaaattcaataagattcccttctacctccaacctcattcatcttcaggggcaaaaact
ctaaaaaaagaccggctgtcagcaagtgatatgcttcaggtgaggaaagtgatggagcat
gtgtatgagaaaatcataaacttggataacgagtctcaaacgactagctcttccaataat
gaaaaagcaggagaacaagaaaaagaggaggacattgctgtgctcgcagaggagaaaatt
gaacttctttgccaggaccaggttttggatcccaatatggaccttcgaactgtaaagcac
ttcatctggaagagtggtggtgatctgacgcttcattatcgccagaaatcaacgtga

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