Coturnix japonica (Japanese quail): 107309079
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Entry
107309079 CDS
T04297
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107309079 (VPS50)
Membrane trafficking [BR:
cjo04131
]
Protein recycling
Others
EARP complex
107309079 (VPS50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
MJ1674_2nd
Motif
Other DBs
NCBI-GeneID:
107309079
NCBI-ProteinID:
XP_015709025
LinkDB
All DBs
Position
2
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AA seq
967 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVHDLSPIENLRFPTKEELRESWEEPTDPQAQQEIINSIEEV
YFSNDTFDIVKYELERLPPVLSLQELEEHRDKLKQQQAAVSKKVADLILEKQPAYVQELE
RVTSLQNGLQLAAVICTDGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAATVSSV
SDGSSVVGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FHILQLHEFKFMVQSRSPSVSPSKQPASAISTAVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPMKSVSRETLKSKKKSDY
SLNKGNAPILTNTTLNVVRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFELTGLGLSSSRLRTTLNRIQESLIDLEVSADPTGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFECLQPHLDAVMPAAKKPFLQQFYSQTVSTANELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDSLLKEFEEFNRRLNEVSKRV
RVPLVVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKHLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccggcagggtctgagaagtcctcaggagagtgtt
catgacctcagtcctattgaaaacctccggtttcctactaaggaggaactcagagaatca
tgggaagaaccaactgatcctcaagctcagcaagaaataattaatagcattgaagaagtt
tatttttccaatgatacctttgatattgtgaagtatgaattagagaggcttcctcctgta
ctgagtcttcaagaactggaagaacatagagacaaattaaaacaacagcaagctgctgta
tctaagaaagttgcagacttgattcttgaaaagcaacctgcatatgttcaggaactggaa
cgtgttacatcattgcagaacggccttcagttagcagctgttatttgtacagatggaaga
agacacctgaatattgcaaaggaaggcttcacacaaaccagtttgggacttcttgcaaat
caaagaaaaagacagttgcttattggactactgaagtctctgaggacaataaaaacactg
caaagaacagatgtgcgtttaagtgagatgctggaggaagaggactatccaggagctatt
caactatgtttggaatgccagaaagctgccagcactttcaaacactacagttgtataagc
gagttgaattcaaaactgcaagatactttggaacaaatagaggaacaattggatgtagca
ctctctaagatatgtaagaactttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttgggaaaacacagacagcaatggaccaattgcacatgcacttcactcaggct
attcacaacactgtgtttcaagttgtgcttggatatgtggagctttgtgcaggaaacaca
gacaccaagtttcagaagttacaatacaaagacctctgtacacatattacatcagacagt
tacattccatgccttgctgatctctgcaaagccctttgggaagtcatgcttagctattac
cgaacaatgcagtggcatgagaatcatgatcaagatgaggcagcaactgtatcttctgtt
tcagatggcagcagtgtggttggaactgaggagaacagttttgaccgcagctatgtaaaa
aagaaattggaacatgggctttctcgaatatggcaggatgttcaactgaaagtgaaaaca
taccttctgggaacagatctgtctaacttcaaatacgatgactttatatttgtacttgat
gttatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagcgttaactatttcaaaacgtaccacagaactcgtctt
gaagaattaagaatgtttttggagaatgagacctgggaactttgccctgttaaatcaagc
tttcacattttacagcttcatgaatttaaattcatggtgcagtcacgttccccatctgtg
tcacccagtaagcagcctgcttcagcaatttcaacggcagtaactttatttgagcagtac
tgtaatggaggaaacccatttgaaattcaggctgacagcaaagatgatgaaacagaagat
gtgttagcttccaatgggtatgagtctgatgaacaagaaaaaagtgcctatcaagagtat
gatagtgacagcgatgttcctgaagagttgaaaagagactatgtagatgagcagacagga
gatgcccccatgaagagtgtttctcgagaaactctgaagagcaaaaagaaatcagattat
agcctcaataaagggaatgcacctatcctgacaaacactacactcaatgtagtaaggctt
gttgggaagtatatgcagatgatgaacattctcaagccaattgcatttgatgtcatccac
ttcatgtcccagctcttcgactactacctgtatgcagtctatacattttttggccgaaat
gacacgtttgaattgacaggattgggcctcagcagtagcagattgcgcaccacactgaac
agaatccaggagagcctcattgatctagaggtctctgctgatcccacaggaactctaaca
gctgctgaagagagaaaggagaaggtgccaagcccacatctcagtcatctagttgttttg
acatctggcaattcactctatggtttggcagagagagtggtagctacggaatccttggta
tttctagctgagcagtttgagtgtcttcagcctcatcttgatgcagtgatgccagctgcc
aagaaaccttttcttcagcagttctattctcagactgtgtctactgccaatgagctacgc
aaaccagtttattggattgttgctgctaaagccattgattatgaacagatgctgcttctc
atggctaatgtaaaatgggatgtgaaagaaatcatgtcacaacacaatgtatacgtagac
tctcttttgaaggaatttgaagaatttaacagaagattgaatgaggtatctaagagagtc
cgtgttccactagtagtctcaaatatactttgggagcactgcatacgcttggccaataga
actcttgtggaaggttatgctaatgtgaagaaatgcagcaatgaaggacgtgccttgatg
caactggactttcaacagttcttaatgaaactagaaaagttaacagacattagacctatt
ccagataaagaatttgtggagacctacattaaagcatattatttaacagaaaatgacatg
gagcgctggataaaagaacacagggaatattccaccaagcacttgacgaatctggtgaat
gtttgtctggggtctcatatcaacaagaaggcaagacagaagctgctagccgctattgat
gacatagacaggcctaaaagataa
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