Coturnix japonica (Japanese quail): 107309424
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Entry
107309424 CDS
T04297
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03430
Mismatch repair
cjo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107309424 (MLH1)
03460 Fanconi anemia pathway
107309424 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107309424 (MLH1)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107309424 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Nrap
Motif
Other DBs
NCBI-GeneID:
107309424
NCBI-ProteinID:
XP_015709701
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Position
2:42107991..42121786
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AA seq
757 aa
AA seq
DB search
MALVAGVIRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQ
VQDNGCGIRKEDLHIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTA
DAKCAYRASYSDGKIKAPPKPCAGNQGTQIMVEDLFYNVNTRRKALKNPSEEYAKILEVV
GRYAIHNSGISFSVKKQGDTVSDVRTLSNATTVDNIRSIFGNAVSRELIEVGCEDANLAF
KMKGYITNANYSVKKCIFLLFINHRLVESTALRKAIETVYAAYLPKSTHPFLYLSLEIAP
KNVDVNVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYYTQTLLPGAECSSSEVV
KSAASSSTATKGTSDKVYAHQMVRTDSREQKLDAFLQPVNNSQSTGPTEETSGVNVGPPE
GTVRPQDAEMEDVSELLETADVIEMADVQQDAVMPGGLSKSGHLSPEKAVPRKRPREDTD
VRMEEDTGKEMTAACTPKRRIINLTSVLTLQDEISNQAHESLQEMLRDHSFVGCVSPQWA
LVQHRTKLYLLNTTKLSQELFYQILIYDFANFGVLRLSEPAPLYELAMLALEDPESGWTE
EDGPKEGLAEYIVEFLKKKTEMLKDYFSLEIDEEGNLIGLPLLIDNYIPLLEGLPMFILR
LATEVNWDEEKECFESLSKELSLFYSIRKQYIMDETNLTHSQNEDSDSSSPPWKWTVEHV
VYKAFRTHLLPPKHFTDDGNILQLANLPDLYKVFERC
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggtcgccggcgtcattcggcggctggatgaggccgtggtgaatcgcatcgcg
gccggcgaggtcatccagagaccggcaaacgccatcaaggagatgatagagaactgtttg
gatgctaaatctacaagtatccaggtagtagtcaaagaaggtggtctgaagctcatccag
gtccaagataatggctgtggtatcagaaaagaagatctgcacattgtttgtgagagattt
actaccagcaaactgcagaaatttgaagacttggctagtatttcaacgtatgggtttagg
ggtgaggcattggctagcatcagtcatgttgcccatgttacagtaacaactaaaacagct
gatgcaaagtgtgcatacagagcttcttacagtgatggaaaaatcaaagcccctccaaaa
ccctgtgctggaaaccaagggacacagatcatggtggaagatcttttttacaatgtaaat
acaaggaggaaagctttaaaaaatccaagtgaggagtatgccaaaatactagaagttgtt
ggcaggtatgccatccataactcaggtatcagcttttcagttaaaaagcaaggtgatact
gtgtcagatgtcagaactttatcaaatgctaccacagtggacaacattaggtccatcttt
ggaaatgctgttagcagggaactcatagaagtgggctgcgaagatgcaaatctggccttt
aaaatgaaaggctacatcacgaatgccaactactctgtgaagaaatgtatatttttactc
ttcataaaccatcggctggtagagtcaactgctttgcggaaagccatagagactgtgtat
gctgcttatttgccaaaaagtacacatccattcctatacttaagcctggaaatagcccct
aaaaatgtagatgtgaatgtacaccctacaaaacatgaggtccacttcctccatgaagac
agcattctagagcgtgtgcaacaacacatagagagcaagctgttgggttctaattcttca
aggatgtactacactcagacattgcttccaggggccgaatgttcttccagtgaggtggta
aaatcagcagcgagctcttctacggctacaaaaggaaccagtgataaagtttatgcacat
cagatggtccgcactgattcccgagagcagaagttggatgcttttcttcagccagtgaac
aactcccagagtacaggccccacggaagagacatcaggggttaatgtgggacctccagag
ggcacagttaggccacaggatgctgaaatggaagatgtgagtgagctccttgaaacagct
gatgtaattgaaatggctgacgttcagcaggatgcagtgatgcctggagggctgagtaag
agtggacacttgtctcctgagaaagcagtcccacgaaagagaccacgggaagacacagat
gtacgaatggaagaagacactggaaaagaaatgactgctgcctgcacccctaaaagaaga
attatcaatttgaccagcgtgttgactcttcaggatgagattagcaaccaggcacatgaa
agtcttcaggagatgctgcgtgatcactcgtttgttggttgtgtcagccctcagtgggct
ctggtgcagcatcggacaaaactgtatcttctcaatacaacaaaactcagccaggaactt
ttctaccagatacttatttatgactttgcaaactttggcgttctaagactctctgagcca
gctcctttatatgagcttgcaatgcttgctttagaggaccctgaaagtggctggacagag
gaagatggcccaaaagaaggccttgctgagtacatagttgagtttctgaaaaagaagact
gaaatgttgaaagattatttctcccttgaaatcgatgaggaaggaaaccttattggatta
ccccttctcatagacaactacatacccctgctggagggactaccaatgtttatcctccgt
ttggccactgaggtaaactgggatgaagagaaggagtgctttgaaagcctaagtaaagaa
ctttctctgttctactccattagaaaacaatatataatggatgaaaccaacctgacacac
tctcagaatgaggattctgactctagttcaccgccgtggaaatggacagtggagcacgtt
gtttacaaagccttcaggactcatcttttacctcctaaacacttcacagatgacggcaac
atcttgcagctcgctaacctgcctgacttgtataaagtttttgagagatgctga
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