Coturnix japonica (Japanese quail): 107309556
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Entry
107309556 CDS
T04297
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107309556 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjo03019
]
107309556 (DROSHA)
03009 Ribosome biogenesis [BR:
cjo03009
]
107309556 (DROSHA)
03036 Chromosome and associated proteins [BR:
cjo03036
]
107309556 (DROSHA)
Enzymes [BR:
cjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
107309556 (DROSHA)
Messenger RNA biogenesis [BR:
cjo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
107309556 (DROSHA)
Ribosome biogenesis [BR:
cjo03009
]
Eukaryotic type
90S particles
RNase
107309556 (DROSHA)
Prokaryotic type
rRNA processing factors
107309556 (DROSHA)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
107309556 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
YcaO
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
107309556
NCBI-ProteinID:
XP_015709953
UniProt:
A0A8C2TY72
LinkDB
All DBs
Position
2:complement(60502738..60567830)
Genome browser
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSAQAYRPQNLRQLHPQQPSVQYQYDQQATPSATYSNPSAT
SYMPPRPDFVPYPPPVPPSTQNPINQCPMRPPFPNHQMRQSFPVPPCFPPAPPPVPAPSN
APVPATPTGQSTFPYMMPPPAVPHPPPPPVIPQQVNYQPVYSTGYSQQSFPPPNFNSYQH
NSGSFQSSTTISSSGSSHFRHTGQYQGEKSQSDRRSPERSKHYDEHRHREHSHIHGDRHR
SNNHGDRRDRGRSPDRRRQESSRHRTEYDRGRMSPHHRSYERSRERERDRHRHRDSRRSP
SPDRSYKKDYKRTGSRSPSRERKRPRWEEERERWSESQSANKEKNYTSIKDKESEENTSE
KNEDEDDELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFEEELGKRQAK
AKAARPPWEPPKTKLDEDLESSSDSECDSDDDSSCSSSSDSEVFDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFSHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVKGLELFSSYLFKDILELYDWNLKGPSLENDSVSCPRFHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
SQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMH
LDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMR
KKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLAT
YRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNDKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWE
REHQERETDETEEARK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctggacgaggatgtccccgtgggcaggggggaccaggagcaagaact
tcagcacaggcttatcgtcctcagaacctgcggcagcttcacccccagcagccctctgta
cagtaccagtatgaccagcaagccacaccttcagctacttattcaaacccttcagccact
agttacatgcctcccaggccagactttgttccatatcccccaccagttcccccttcaaca
caaaatcccatcaaccagtgtcctatgaggccaccatttccaaaccatcagatgaggcag
agcttcccagtgcctccatgtttccctcctgctcctccaccagtgccagcccctagcaat
gctcctgtgcctgcaactcctactgggcagagcacctttccatacatgatgcctcctccc
gcagtgccccatcctcccccgccaccagtcataccacagcaagtcaactaccagcctgta
tattccacagggtattcccagcagtcattcccaccacctaacttcaatagctatcagcac
aactctggctcctttcagagcagcactaccattagcagcagtggcagcagccattttcgg
cacacaggtcagtaccagggagaaaagtcacaaagtgatcgacggtctccagagaggagc
aagcactatgatgagcaccggcatcgtgagcacagtcacatccatggtgataggcatcga
tccaataaccatggggatcgtcgggatcgaggccgcagtccagacaggaggaggcaggag
agcagtcggcaccggacggagtatgacagaggaagaatgtcacctcatcatagaagttat
gagcgtagcagggagcgtgagagggacaggcacaggcaccgtgacagcagaagatcacca
tcaccagacaggtcctacaaaaaagattataaaagaacaggaagccgctctccaagtagg
gaaaggaagagaccccgatgggaagaagaaagagaaaggtggtctgagagccagagtgcc
aacaaagaaaaaaattacactagtatcaaagacaaagagtcggaggagaacacatctgaa
aaaaatgaagatgaagatgatgaattacttaaaccagtctgggttcgctgtacccattct
gagagctattattcaaatgaccctatggatcaagtgggggactctactgtggtaggcaca
agcaagctccgagatctgtacgaaaagtttgaggaggagctaggaaaacgacaggcaaag
gccaaagcagccaggccaccatgggagccaccgaagaccaagctggatgaagatcttgag
agctccagtgactcagaatgtgactctgatgatgacagcagctgctctagcagttcggat
tcagaagtttttgatgtcattgcagaaattaagcgtaaaaaagcacaccctgatcgtctc
catgaggaactatggtacaatgatccgggacagatgaatgatggaccgctatgcaagtgc
agcgctaaagctcgacgaacagggataagacatggcatttatcctggagaagagcctatt
aaaccatgtcgccccatgaccaacaatgctggaagactgtaccactatcgaattacagtg
tcacctcccacaaacttcttaacagatagacctactgttattgagtatgatgaccatgaa
tatatctttgaaggattctctatgttttcgcatgccccactaacaaatattcctctatgt
aaagtaatcagatttaacattgactatacaattcatttcattgaagagatgatgccagag
aatttttgtgtgaaaggtcttgagctgttctcttcttacctattcaaagatattctggag
ctctatgactggaatcttaaaggtccttcacttgaaaatgattctgtttcctgccccaga
tttcacttcatgccgcgatttgtgagatttcttccagatggagggaaggaagtactgtca
atgcatcagattcttctctacttgttacgatgcaataaagctttggtgcctgaagaagag
attgccaacatgcttcagtgggaagagctggaatggcaaaaatacgcagaggaatgcaaa
ggaatgatcgttaccagccctggcatgaaacccagctcagttcgtatcgatcaactggac
cgtgaacaattcaatcctgatgtaattactttccccattattgtccactttgggatacga
cctgctcaactcagctatgctggagatcctcaatatcaaaaactgtggaagagttatgtg
aagctgcgtcacctgctagctaacagtcccaaagtcaagcaagctgataaacagaaatta
tcacagagagaggaagcactgcagaaaatccggcagaagaacacgatgagacgtgaagta
actgtcgagttgagtagccagggattctggaaaacagggatacgctctgatgtctgccag
cacgcaatgatgcttcctgtcctcacccaccatattcgctaccatcagtgtctgatgcat
ttggacaagttgataggctacacttttcgagataggtgcttgctgcagcttgctatgact
catccaagccatcacttaaactttggaatgaatccagaccatgccagaaattccttatcc
aactgtgggattcgacaaccgaagtatggagacagaaaagttcaccatatgcacatgaga
aaaaaagggataaacaccctgataaatattatgtcccgtttgggacaggatgatccagct
ccttccaggattaaccacaatgagcgtttagaatttctgggagatgctgtggtggagttc
ttaacaagtgtccacttgtactacctgtttcccacgctagaggaaggaggattagctacg
taccgcactgccattgttcagaaccaacatctggccatgctggctaagaagctggaacta
gatcgatttatgctttatgctcatggtccagacctctgcagggaatcggatctccgccat
gctatggccaactgctttgaagccctaataggagcagtttatctggagggtagtcttgaa
gaagccaaacaattatttggacgtttgctctttaatgacaaggacctgcgggatgtatgg
cttaattatccactacacccacttcaactgcaggaatctaatactgacaggcaactcatt
gagacctctccagttcttcaaaagcttacagagtttgaggaggcaattggagtcatcttt
actcatgttcgacttctagcacgtgcgttcactctgaggacagtaggctttaaccatctg
actctaggccacaatcagaggatggaattcctgggtgactccataatgcagttggtagcc
acagagtatttattcatacatttccccgatcatcatgaagggcacttaacgctgttgaga
agctctttggtgaacaacaggacgcaggccaaagtggcagaagagctgggaatgcaagag
ttcgccatcactaatgacaagacaaaaagacccgtagctcttcgaactaaaactctagct
gatctcttggaatcctttattgctgccctgtacattgataaagatttggagtatgttcac
actttcatgaatgtatgcttttttccacggttaaaggaattcattttaaatcaagattgg
aatgaccctaaatctcagcttcagcagtgctgcttgactctcaggacagaagggaaggaa
ccggacattcctctttacaagactctgcagacagtgggaccatctcatgccaggacgtac
acagtagctgtctatttcaaaggggaaagaataggatgtggtaaaggcccaagtattcaa
caagcagaaatgggagctgcgatggatgcacttgaaaaatataactttccccagatggcc
catcagaagcggttcattgaacggaaatacagacaagagttgaaagaaatgaggtgggaa
agagagcatcaagagagagagacagatgagactgaagaagcaaggaaataa
DBGET
integrated database retrieval system
