Coturnix japonica (Japanese quail): 107310185
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Entry
107310185 CDS
T04297
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107310185 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjo01009
]
107310185 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107310185 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
cjo03029
]
107310185 (RB1CC1)
Protein phosphatases and associated proteins [BR:
cjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107310185 (RB1CC1)
Membrane trafficking [BR:
cjo04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107310185 (RB1CC1)
Mitochondrial biogenesis [BR:
cjo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107310185 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
107310185
NCBI-ProteinID:
XP_015711090
UniProt:
A0A8C2TIL6
LinkDB
All DBs
Position
2:complement(99424155..99492617)
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQAKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIEDIKLKLTHLGSAVSVMAKIPLLECLTRHSYRECLGRLDSSADHGGAESEETENGKSS
ELVHYSDVSKVNNKSVLASFCKSVEHSALEGTNSENVKDDKESGQNITVQDNETSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALINDGKHLYEAERAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQTSPQSATTPRMES
TTGTTIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSVENASRSVCVEKCKVIAQDSKVHLRGIKEDLCHFRTLVQKEQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLKDKHQKELQSLKSEYETKINKLLEDDEESKKKIVKL
KGDLLGLEEVLQNKNDEFAMVKNEKEAVVSLQNEKDQKLHELECQMETQNTEIKKLRQSR
EIVLEDLKKLHVENDEKLQLLRAELQSLEQSHLKELESNLQARHLQEFEKVLAEHKDSLD
KLKTENQHRLEQMQESHAAVVQEKQQQVEELKLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLKSQIDKETESLKKEIEKLNSKIQVSSDEYQVGLSELRTLMTIEKDQ
CISELVDRYEEESNLLRTELNKITVLHQKTSEAEKRLSDQITELQCKLELEKSALEKEKT
EKMALCEQQEKYEAIIHRLKEEKDLLVSNQEQDKQLLIQKLNSEKEDAVQTACKEFELQK
EAAEKGLLEKIQQLEMQVNQSPPTESSAESSLVAELQEKLQEEKMKFLEQLEEQERRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKMLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVSKLRSSNLSPSTYLAATSEACGACAADVPTDTERLASDIALEGRMD
STMETSMMAVHENIHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttctggtcaacactggaactacccttaccttcgacacagagctt
gcagtacaaaatgtggctgatctgaaacatgcaatacaagctaagtataagattgccatt
cagcaccaggtattggttgtcaatggaggagagtgtatggcccctgacagaagagtgtgt
agttacagtgctggaacagacaccaacccaattttcttattcaacaaagaaatgatcttg
tgtgagcgtccaccagccatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctctcatgatgcctgcagtttttcatacagtggcatcacgaacacag
cttgctgtggaaatgtatgaagttgccaagaagctttgctcgttttgtgaaggtcttgta
catgatgaacatcttcaacatcaaggctgggctgccataatggccaacttggaagattgt
acatactcttatcaaaagctgcttttcaagtttgaaaatgtatattcaagctatttgcag
tccatagaagatattaagttgaaacttacacacttgggttctgctgtctctgtcatggcc
aagataccgctgctggagtgcctaacaagacatagttacagggagtgtttaggaagactg
gattcatcagcagaccatggaggggcggaaagcgaagaaactgagaatgggaaatcttct
gaactggtgcattattctgatgtatctaaagtgaacaataaatccgtgttagcatcattt
tgcaagtcagttgaacattcagctttggaaggcacaaattctgaaaatgtaaaagatgat
aaggagtctggtcaaaatattactgtccaggacaatgaaacatcagtagaactgaaagat
gatgatcagccttccttcaatgtgtctttattagactggataaatgttcaagacagacct
aatgatgttgaatcactggtcagaaaatgttttgattctatgagcaggcttgatccaagg
atcatccagccctttttggcagaatgtcgacaaactattgctaaactagataatcagaat
atgaaggctattaaaggccttgaggataggctctatgcattggaccagatgatagcaagt
tgcagcagactggtaaatgaacaaaaagaacttgctcagggatttttggctaatcaaaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagttgatgattatgttaactaatcatagaaagctgttggatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctacaagtcagactaaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaacttcaagcattgcttcgtcttgtgacagaa
ctcctagagagagtcaaggttgtagaggctctcagtactgttcctcagatgtactgtcta
gctgtcgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaatgatgggaaacacttatatgaagctgaaagggcaaaaagagaatctttt
ggtaaactgttcagaaagtcttttctaaggaatcgcttattcagaggacttgattcctgg
cctccatccttttgtacaagaaaacctcgcagatttgacagtgagcttccagatatctca
ttaagtgacttgcagtttttgcagtctttctgtccttcggaagttcagccattactcagg
gttccgatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataatctg
gtaaaagcagcacagagtttggatgaaatgtcacaaaccattaccgacctgctgaatgaa
caaaaggcctccaatagtcaaacatcaccacaatctgctactacaccaaggatggaaagt
acaacaggaaccacaattgctacctcttcaagaactcctccgtcactcagtcttcagggt
cccctatgtcctcctgtgtgtccccctgctccactagaggaattgtcaccagacagcatc
gatgctcatacatttgattttgaaactattgcccacccaaacctggagcaagctctgaag
caaggatcattggacttggattcgttagcagaaagtccggaatctgactttatgtcagca
gtaaatgaatttgtaatagaagaaaatccagtctctcctaatgttataagtgatccacag
agtcctgaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagacacaagttcttgcgtaaaggacgtttcagtagaaaacgcttctcgcagt
gtttgtgtggagaagtgtaaggttattgctcaagattcaaaagtacatttaagaggtata
aaagaagatctttgccactttagaacacttgtacaaaaagaacagtgtgacttttctaat
tctttgaaatgcacttcattagaaatagtaaatactattgaaaaggtaaaactttcactt
gaaaaaacactaaaagataaacatcaaaaagaactgcagtctttgaaaagtgaatatgaa
accaaaattaataaattactggaggacgatgaggaaagcaaaaaaaagattgtaaagtta
aaaggtgacttgttaggccttgaggaagtacttcagaataagaacgatgaatttgcaatg
gtgaaaaatgaaaaagaagctgtagtttcccttcagaatgaaaaagatcagaagctacat
gagttggaatgccaaatggagacacaaaatactgaaattaagaaactgagacagtcacgt
gagattgtactcgaagacttgaaaaaactccacgtagaaaacgatgaaaaactacaactc
ctgagggcagaactccagagtttagaacaaagccatttaaaagaactggaaagcaacctt
caggccaggcatttacaggaatttgagaaggtgcttgctgagcacaaggacagtttagat
aaattaaaaactgagaaccagcatagacttgaacaaatgcaggaatctcatgcagcagtt
gtgcaagagaaacaacaacaggtagaagagttaaaactcaaagtttcagatctgtctgat
ttgaggtgcaaattagaagttgaacttgccctgaaagaagcagaaactgatgaaatgaag
cttctcttggaagaaagccgaaaccagcaacaagagaccttaaaatctcagattgataag
gaaactgaaagcttaaaaaaagagatagagaaattaaacagtaagatacaagttagcagt
gatgaatatcaagtgggattatcagaactaagaactttgatgacaattgagaaagatcaa
tgcatttctgagctagtagacagatatgaagaagaatcaaatttgcttaggactgaacta
aacaaaataacggttctgcatcaaaaaacctctgaagcagaaaaaagactttcagatcaa
ataacggaactgcagtgtaagttagagttggaaaagagtgccctagaaaaggaaaaaaca
gaaaaaatggcactctgtgagcagcaggaaaaatatgaagctattatccataggcttaag
gaagagaaagatctgttagtatctaaccaagaacaagacaagcagttgctcattcagaag
ctcaattctgagaaagaagatgcagtacaaactgcttgtaaagaatttgaattacaaaag
gaagctgctgaaaaggggcttttggaaaaaatacaacaacttgagatgcaagtaaatcag
agtcctcccactgaatcatctgctgaatcaagcttggttgctgagcttcaggaaaagctt
caggaagaaaaaatgaaattcttagagcagcttgaagaacaagaaagaagaaagaatgaa
gaaatgcagaacattagaacatctttaactgcagaacagcagaccaactttaacactgtt
ctagcaagagaaaaaatgaagaaagaaaatataattaatgatcttagtgacaaattaaaa
atgctaacacagcagcaagaaaaagataaggatttgattgaaacactttctgaagatcga
gctcgtttacttgaagaaaagaaaaagcttgaagaagaagtcagtaagctgagaagtagt
aatctctctccatcaacctacttagcagcaacctcagaagcttgtggagcctgtgcagct
gatgttcccactgatacggagagattggcttctgacattgcacttgaagggaggatggac
tccaccatggaaacgagtatgatggctgtgcatgaaaatatccacatgtctgaagaaaaa
cagagaatcatgttgttagaaagaactttgcagttgaaagaagaggagaataagagatta
aatcaaagattgatgtcccagagcatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagatttccaggttggcgatttggttcttataatcttagacgaaagacatgac
aactacgtattatttactgttagtccaaccttgtatttcttgcactcagaatctcttgct
gcactggacctcaaaccaggtgagtgtgcttcaggtgcgtctaggagaccttgggtgctg
ggaaaagtgatggagaaggaatattgccaggccaaaaaggctcaaaacagatttaaagtt
cctctgggtacaaaattctacagagtaaaagcagtaccatggaacaagaaagtataa
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integrated database retrieval system
