Coturnix japonica (Japanese quail): 107310278
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Entry
107310278 CDS
T04297
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjo04040
]
107310278 (TRPA1)
Ion channels [BR:
cjo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107310278 (TRPA1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107310278
NCBI-ProteinID:
XP_015711262
UniProt:
A0A8C2TML0
LinkDB
All DBs
Position
2:complement(106287449..106323703)
Genome browser
AA seq
1126 aa
AA seq
DB search
MKRSLWRLCQSREKAAASSAYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSSEVLNVMDSSGNTPLHWATRKNQVESVS
LLLSRGANPNILNSNMMAPLHMAIQSLHNEIVKILVQHSSTDVNLEGEAGNTPIIVACYK
DNPEALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCMEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGDESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDTEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKFLQMENIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDKVDEEGNTALHLAAKEGHAKAVRLLLDYGAKILLNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVLTFSHYSSANKCPLLEMIEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNKKLKEAEDIFYEPLAILNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTEIYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYSTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLIYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGFEDSTTDAQSTDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHRNSKWDTVLKAVKSNVPNPSTEKSSSFL
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctttgtggcggctgtgccagtcgagggagaaggcggccgcttccagcgcc
taccagggcgtcgtctgcgaggccgatgccgcttccgtcgcctcgcaagatgtcttcaag
gtgatttcagatggaagtgcctgtaggctgcgaagcttcattaagaagaaccgttctgga
ctcaccaaagtggatgaattaaatgcaaccccactgcatcatgctgctgaaggaggccag
atagaattgatgcagttgatcatagatgattcttcctctgaagtgttaaatgtgatggat
tcttctggaaataccccactgcattgggctacaaggaaaaaccaagttgaaagtgttagt
ttacttctcagcagaggagccaacccaaacattctcaactccaatatgatggcacctttg
catatggctatacagtccctgcataatgaaattgtcaagattttggtccagcacagcagt
acagacgttaatttggaaggtgaagcaggaaacactcctataatagtagcatgttataag
gacaatcctgaagcactaacactcctgattgaaaacggaggaaaaatatgtaaaccaaac
aaaacgggatgcatgcccatccatgctgctgcgttttcaggtgcaaaaacatgtatggaa
atccttttaaaaaaaggtgaagaattgggtcactctgctaaaactcacatcaattttacc
aataatgggaagtgcagtccgcttcatttggcagttcaaagcggagacttggaaatgata
aaaatgtgcattgaatttggagcccaaattgatctaaaacagaatgaaaaatgcacagcg
cttcattttgctgccactcaaggagcaactgagattgtaaagttaatgatgtcatcctat
gctggtgacgaatccattattgatgctgtagatgggaataaggaaacattgcttcacagg
acggccttgtttgatcattatgaactggcagagtatttgatttcaatgggagcaaatatt
gatagtgttgacacagaaggtcgatctccacttctgttggccacttcttgtgcgtcatgg
aaaattgtgaatttactgctctcaaaaggagcaaacgtatcattaaaagatcatcttggt
cggaatttcttgcacttgacggtgttacagcctggaggattacaacatctgaatgagaaa
tttctgcagatggaaaatattaaaaatctggtggtggacgaagataacgaaggatgcact
ccactgcattatgcatgcagacaaggtgtggccctctctgtaaataatttactcagcctc
aatgtttccatttattcaaagagcagagacaagaaatcaccattacactttgctgccagc
tatggccgcatcaatacatgccaacgacttataagggatatgaaagacacaaggcttttg
aatgaaggtgataagaagggaatgactcccctccatctggcagcccagaatggtcatgag
aaggtcgttcagtttcttctgaaaagaggggccctttttctctgtgactataaaggctgg
acagccctgcatcatgctgccttcggaggatacactcgcacaatgcagataatactggat
actaatgtgaagtgtactgacaaagtggatgaagaagggaacacagctttgcacctagct
gcaaaagaagggcatgcaaaagcagtaaggttacttcttgactatggtgcaaaaattctg
ttgaacaaagcagtagcttcttttttccatgaagcaatacacaacaggaggaaagatgta
gtgtcagctgtcattttgcacaaaagatgggaagaagctgttctgacattctctcactat
tctagtgccaataaatgccctttgctggaaatgatcgagtatcttcctgattcatttaaa
ctggttttggacaactgcataattgaatcttcagaggaaaagacaagtcgagacttctat
attgaatacaacttcagatatcttcaatgtcccctgacacttaacaagaaattaaaggaa
gctgaagatattttctatgaaccactggccattttaaatgccatggtacgacacaatcgc
atggagctactcagtcatcccgtgtgcaaagagtatttgctaatgaagtggatggcttat
ggttttcgagcgcatctaatgaatttaggcatttattctcttggtttgataccattgact
cttctggtcacccacatacagccaggaagacctttaaatggaacagaaatctatgaagca
agaccgttggagtatgaggactcatacttcacaagagtgtgtatgtgtctagttttaatt
atgagtttactgggaatttgcaaagaaatatttcaactcattcagcagaaattgaaatat
ttgttggattactccaatctactggactggacaatttatagtaccagcataattttcgtg
tcttctttatttattaacacaccagctcatttgcagtgggaatgtggagcaattgctgta
tacttgtcttggatgaacttcttgatttatcttcagcgatttgaaaattatggcatttac
gttgtgatgttctgggaaattctgaggactttgattcggatcgctgttgttttctttttc
ctgatattggcctttggactgagcttctttgtccttttgggctcacagcaaacatatagc
acaccactgctttctgtaatgaagacatttgcaatgatgctgggagacataaactatcat
gatgcattccttgatcctttattgagcagtgaattgccatatccattcctgagttacacg
gttctgattatatttactttgcttattccaatccttcttatgaacttgctaattggtttg
gctgttggggacatagctgaagtgcaaaaatatgctgctctcaaaaggattgcaatgcag
gttaatcttcacacaaacttagagaagaagctgccattttggttccttagtcgagtggac
caggaatcaatcacagtttatcctaacagaccaagatactgtggatttatgagtgtgttc
cagtattgctttgggtttgaggactctaccacagatgcacagagcactgatacaacatta
gaactggaagttctgaagcagaaatacaggctcaaagatatatcaacactgttggaaaag
caacacgacctcattaaactgattatacaaaaaatggagatagtgtcagaggctgaggat
gaagacagcaatgatttatttcagcacaaatttagaaaaaggcagttagaacataggaac
agtaaatgggatacagtgttaaaagctgttaaatcaaatgtgcctaacccaagcacagaa
aagagcagcagcttcttgtag
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