Coturnix japonica (Japanese quail): 107310766
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Entry
107310766 CDS
T04297
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107310766 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cjo04812
]
107310766 (SPTBN1)
Cytoskeleton proteins [BR:
cjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107310766 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
107310766 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
107310766
NCBI-ProteinID:
XP_015712191
UniProt:
A0A8C2U0R6
LinkDB
All DBs
Position
3:4882196..4991042
Genome browser
AA seq
2358 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSLDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAIVKEKLIGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSPNAE
VIQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKXXXXXXXLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRDLML
WMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYAS
EEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREI
GQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRKPPTPEP
SPKVAEDGGSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKESS
PVPSPTADRKTKTAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHGKKASSRSWHNV
YCVINNQEMGFYKDSKAAASGIPYHSEVPVSLKEAVCEIAVDYKKKKHVFKLRLTDGNEY
LFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGKRE
KDKEKDKEKRFSLFGKKK
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtagcgacagattacgacaacattgaaatccagcagcagtacagtgat
gtcaacaaccgctgggatgtggatgactgggacaatgaaaatagttctgctcgactgttt
gagcgatctcgcatcaaggccctggctgatgaacgtgaggcagttcagaagaagactttc
accaagtgggttaattcccacttggcacgtgtgtcatgcaggattacagatctgtacacc
gacctgcgcgatggaaggatgctcatcaaactcctggaagttctttcaggagagagactt
cccaaaccaactaagggaaggatgcgcatccattgcttggagaatgttgataaagccctg
cagttcctgaaagagcaacgagtgcacctggaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacgcttggccttatttggactattatcctgagattccagatccaa
gatatcagtgttgaaactgaagacaacaaggagaagaaatctgctaaggatgcactgctt
ctgtggtgccagatgaagacagctggttaccccaacgtcaacattcacaactttacaaca
agctggagggacggaatggctttcaatgcactaatacacaagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gctgagcagcaccttggtcttactaagctcctggaccccgaggatatcagtgttgatcac
cccgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaaaatg
aaagctttagctgttgaaggaaagcgcattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgattgagaaatatgaatcgctggcttctgaccttctggagtggatcgagcaa
accattatcatcctcaacaaccgcaagtttgccaactcactagttggtgtgcagcagcaa
ctgcaggcattcaacacctaccgcacagtagagaaaccacccaagtttacagagaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaaccagaaagta
tacatgccaagggagggcaagctcatctctgacataaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacgcagatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggataactttggctttgaccttccagcagtagaggctgca
acgaaaaagcatgaggccattgaaacagacattgcagcatatgaagagcgagtccaggct
gtggttgcggttgcaaaggagcttgagactgaaaattatcatgatatcaaacgcatcact
gcaagaaaggacaatgttatacgcctgtgggagtacctcctggaactactcagggcacga
agacaacggctggaaatgaatcttggcctacaaaagattttccaggaaatgctatacatt
atggactggatggatgagatgaaggtgcttctgctgtcacaagactatggcaaacacttg
ttaggagttgaagacctgttgcaaaaacatgctctagtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcatctgctcagaagtttgccaccgatggagaaggt
tacaagccgtgtgacccacaggttattagggaccgtgtcgctcatatggagttctgttac
caagagctgtgtcagctcgcagctgagcgcagggcccgcttggaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaagagggttggatcagagagaaggagcagatc
ctttcatctgatgactatgggaaggaccttaccagcgtcgtccgtctcttgagtaaacat
aaggcatttgaagatgaaatgagtggtcgcagtggccactttcagcaggcaataaaagaa
ggtgaagacatgattgcggaagagcattttgggtctgagaaaatcagagaaagaattaag
gatattcgggagcagtgggctaacttggaacagttatctgccattaggaagaagcgtctg
gaggaagcttctctccttcaccagttccaggctgatgctgatgacattgatgcatggatg
ttggacatcctcaaaattgtctccagcagtgatgtcggccatgatgaatattccactcag
tccttggtcaagaaacacaaggatgttgccgaagagattgcaagctaccggccgaccatt
gactcgcttcatgagcaggcaaaggctctaccacaggagcatgccggatctctagatgtg
caaggcaggttgtctggaatagaagaaagatacaaagaggttgctgagctgactcggctg
cgtaaacaggctttgcaggatacccttgctctgtataagatgttcagtgaggcagatgct
tgtgagctttggattgacgagaaggagaagtggctgaataacatgcagattccagagaag
ctggaggacctggaagtgatccagcacagatttgaaagcttagaaccagaaatgaacaat
caggcttcccgtgttgcagtagtgaaccaaattgcaagacagctaatgcatagcggccat
ccaagtgagaaggagataaaagcacagcaagataaactcaacacaagatggagccagttc
agagaactggtagacaggaagaaggatgccctgctctctgccttaagtatccagaattac
caccttgaatgtaatgaaaccaagtcctggatcagggagaaaaccaaagtgattgaatcc
acacaggatctgggtaacgatctggctggagtgatggctctgcagcggaagctgacaggc
atggaacgtgacctggtagccattgaagctaagcttagtgacctgcaaaaggaggcagaa
aagttggaatcagagcatcctgaccaggcgcaagctatcctttcacggcttgcagaaatc
aatgatgtatgggaagaaatgaagaccaccctgaaaaaccgggaggagtctcttggagag
gcaagcaaactgcagcaattcctgagagatctggatgacttccagtcttggctatccaga
acgcagactgcaatcgcctctgaagacatgccaaacacactgacagaggctgagaagctg
ctcactcaacatgagaacattaagaacgaaatcaacaattacgaggaagactatcagaaa
atgagggacatgggtgagatggtgacacaagggcagactgatgctcagtacatgttctta
cgccagcgcctacaggccttggacactggatggaatgagcttcacaaaatgtgggagaac
aggcaaaatctcctttcccagtctcatgcctaccagctcttcctcagagataccaagcaa
gcagaagcatttcttaacaaccaggagtatgttttggcacacacagaaatgcccactacc
ttggaaggagcagaagctgctattaagaaacaggaagatttcatgaccaccatggatgcg
aatgaagaaaagatcaatgcagttgtagagacgggcagaaggctggttagcgatggaaac
attaactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaggataacagggacctccagaagttt
cttcaggattgtcaagagctctcgctctggatcaatgagaagatgcttacagctcaggat
atgtcttacgatgaggcaaggaacctgcacagcaaatggctgaagcatcaggcatttatg
gcagaacttgcatccaacaaagaatggctggagaagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaagctatagtgaaagaaaagctaatagggcttcatcaa
atgtgggaagagcttgaatccaccactcagaccaaggctcagcgtctctttgatgcaaac
aaggcagagctttttacccagagctgtgctgatctggataagtggctgaatggtttggag
agccaaattcagtcggacgactatggaaaagacctcaccagtgtcaacatcctattgaag
aaacagcagatgctagagaatcaaatggatgtacgtaagaaggagatagaagagctacaa
agccaggcacgggctctaagtcaagaagggaagagtacagatgaagtagatggtaaacgc
cttactgttgaaaagaagtttttggagttgttggaacctttgaatgaaaggaaagcaaac
ctgctggcctccaaggaaatccaccagttcaaccgggatgtagaagatgaaattttgtgg
gttggagagaggatgcctatagcaacatctactgatcacggacacaacctccagactgtg
cagctactgataaagaagaatcagacacttcagaaagaaatccaaggacatcagcctcgt
attgatgatatttttgagaggagtcaaaacattatcacagacagtagccctaatgctgaa
gtcattcaacagagacttgcagacttgaagcagctgtggaacctcctaatcgaggagaca
gagaaacgccacaagcgcctggaggagtctcaccgggcacagcagtactacttcgatgct
gctgaggctgaggcctggatgagtgagcaagagctttacatgatgtcagaagagaaagct
aaggatgaacagagtgcagtgtccatgttgaagaaacaccagattttggaacaggctgtg
gaagactatgctgagactgtgcatcagctttcgaagaccagcagaactttggtggcagat
aatcatcctgaaagtgagcgtatcagcatgcgccagtccaaagtggataagctgtatgca
ggtctgaaggatctagcagaagagagaaggggcaaactggatgagagacacaggctgttc
cagctgaacagggaggtggatgacctggagcagtggattgctgaaagagaggtggtggca
ggatcccatgagctgggacaggattatgaacacgtaacgatgctacaggagcgattccga
gaatttgcccgagacactggaaacatcggacaggagcgtgtggatactgttaaccacatg
gctgatgagctcatcaactctggacattcagatgctgccacaattgcagagtggaaggat
ggtctcaatgaggcctgggctgatctcctggagctcattgacacgagaacgcaaattctt
gcagcctcttatgaactgcacaaattttaccacgatgccaaggaaatcttagggcgcatt
caagacaaacacaagaaactgccagaagagcttggtagagaccaaaacacggtggaaaca
ctacagagaatgcacacgacgtttgaacacgatatccaggcgctcggcacacaggtaaga
cagctccaggaggatgctgcgcgcctgcaggctgcctacgctggagacaaannnnnnnnn
nnnnnnnnnnncctggaagcgtggaaggcgctgttggatgcgtgtgagggccgcagggtt
aggctggtggacacaggagacaaattccgtttcttcagcatggttcgggatctcatgctt
tggatggaagatgttatccggcagattgaagcccaggaaaagccaagggatgtttcatct
gttgaactactaatgaacaatcaccagggtatcaaagcagaaatcgatgcccgaaatgac
agctttactacctgcatcgagcttggcaaatctcttctggcaagaaagcactacgcatca
gaggagatcaaggaaaagctactgcagctgacagaaaaaagaaaagaaatgattgacaag
tgggaagaccgatgggagtggctgagactgattttggaggtgcatcagttttcaagggac
gcgagtgtggctgaggcctggctgctgggccaggagccctacctgtccagccgtgaaata
ggtcaaagtgttgatgaagtggaaaaattaattaagcggcacgaagcatttgagaaatct
gcagctacttgggatgagagatttgcagcattggaaagactgaccacgttggaactgctg
gaagttcgtcggcagcaagaggaagaggagaggaagagaaagccgcctactccagagcca
agcccaaaggttgcagaagatggaggctcccagcagcaatgggatgggacaaaaggagaa
caggtttcccagaatggtttgccatcagaccaggaatctccacgggtggcagaaactgca
gaaacaaacgaaatggttaatggagctgcagaacagaggacaagttcaaaagagtccagt
cctgttccttctccaacggcagaccgcaaaaccaagactgccattcaggctcagactgct
gctaccctaccagccaaaacacaggagattccttccgctcagatggagggcttcttgcat
cgtaaacacgaatgggagacacacggcaagaaagcctcaagcaggtcatggcataacgtg
tactgtgtcataaacaaccaagagatgggcttctacaaggattcaaaagctgctgcttct
ggcattccctatcacagtgaggttccagtcagcttgaaagaagcagtctgtgaaatagcg
gtcgactataaaaagaaaaagcatgtgtttaagctaagattgactgacggcaatgaatac
ctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatcacatcagct
atctcatctgataaaatcgaagtgtccccaaccactcagagcactccagcctccagccgt
gcccagaccctgcctgccagtgtcacaataacaagcgagtccagtcctggcaagagagag
aaagacaaagaaaaagacaaagagaaaagattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
