Coturnix japonica (Japanese quail): 107310847
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Entry
107310847 CDS
T04297
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107310847 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107310847 (NRXN1)
Membrane trafficking [BR:
cjo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
107310847 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
EGF_2
Motif
Other DBs
NCBI-GeneID:
107310847
NCBI-ProteinID:
XP_015712338
LinkDB
All DBs
Position
3:8252717..8858990
Genome browser
AA seq
1525 aa
AA seq
DB search
MGAALVRRGGCLLLWLALLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFNMKTR
SSSGLVLYFDDEGFCDFLELILTQGGRLQLSFSIFCAEPATLLSDMAVNDNLWHAVVIRR
HFKNTTLIIDRAEAKWVEVKSKRRDMTVFSGLFLGGLPPELRSATLKLTLSSVKDREPFK
GWITDVRVNYTQTLPVESQEVRLDDEQSRLCAREDVCLNGGVCSVLNDQAVCDCSQTGFR
GKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLS
FKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVK
VTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTAD
LPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITF
ETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIE
MLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGES
EILDLDDDLYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQS
TAGVKPSCSRETAKPCLSNPCKNNGVCRDGWNRYVCDCSGTGYLGRSCEREATILSYDGS
MFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRESADTLRLELDAGRVKLTVNLDC
IRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLMVDDQQAMTGQMAGDHTRLEF
HNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA
DPVTFKTKASYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHY
VFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQSTAGARNLDLKS
DLYIGGVAKEMYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEVAL
MKADLQGPSTTCQEDSCANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQI
TYTWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSTGLGDYLELHIHQGKIGVKFNVGT
DDIAIEEINAIINDGKYHVVRFTRSGGNATLQVDNWPVIERYPAGHKVTAGLFVDSRRNN
DNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIKIGGKERGHPFQGQLSGLYY
NGLKVLNMAAENDANIVIEGNVRLVGEVPSSMTTESTATAMQSEMSTSVMETTTTLATST
ARRGKAPTKEPIGQTTDDILVASAECPSDDEDIDPCEPSSGGLANPTRAGGGREYPGSSE
VIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAV
IKEKQPNSAKSSNKNKKNKDKEYYV
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggcgctggtgcggcgtgggggctgcctgctgctctggctggccctgctgctg
ggctgctgggctgagctgggcagtgggctggagttcccaggggctgaggggcagtggacc
cgcttccccaagtggaatgcctgctgtgagagcgagatgagcttcaacatgaagacacgc
agttccagcgggctggtgctctactttgatgatgagggcttctgtgacttcctggagctc
atccttacccagggtgggcggctgcagctcagtttctccatcttctgtgccgagcctgcc
accttgctctctgacatggcggtcaacgacaacctttggcatgctgtggtcatccgccgc
cacttcaagaacaccactctgatcattgaccgggctgaggcgaagtgggtggaggtgaag
tccaaacgacgggacatgactgtgttcagtggcctcttcttgggggggcttccgccggag
ctgcgatcagcaacactaaagctgacactctcctctgtcaaggaccgggagcccttcaag
ggctggataacggatgttcgggtcaactacacacagacattgccggtggagagccaggag
gtgcggctggacgatgagcagagccgcctgtgtgctcgggaggatgtttgcctcaatgga
ggtgtctgctcggtgctcaacgaccaggctgtctgcgactgctcccaaacaggctttcgg
gggaaggactgcagtgaagaagacaactatgtggaaggtctggcgcacctgatgatgggc
gaccaaggtaaaagtaaaggaaaagaagaatatattgcaacgttcaagggatcagaatac
ttctgctatgatttatctcagaatcccatacagagtagcagtgatgaaataactctatca
tttaaaacacttcagagaaacggactgatgcttcacacaggaaaatcagctgactatgtc
aatcttgcactgaaaaatggagctgtctccttggtcattaatttgggctcaggggccttt
gaagcactggtggaacctgtgaatgggaaatttaatgacaatgcctggcatgatgtgaaa
gtaaccaggaatctgcgtcagcactcaggcattggacacgctatggtaaacaaactacat
tgttcggtgacaatatcagtggatggaattctgaccactacgggatacacgcaagaagac
tacaccatgctgggctctgatgactttttctatgttggtggcagtcctagcacagcagac
ctcccagggtcaccagtcagtaacaactttatgggctgtctcaaagaggttgtatataag
aataatgatgtgaggttggagttatctcgacttgccaagcaaggagaccctaaaatgaag
attcatggggtagtagcctttaaatgtgagaatgttgcaaccttagatcctatcactttt
gaaacaccagagtctttcatctctttgccaaagtggaatgccaagaaaacaggctcaata
tcatttgactttcgtacaactgagccaaatggtttgattcttttcagtcatggaaagcca
aggcaccaaaaagatgccaaacacccacagatggtgaaagttgacttttttgccattgag
atgcttgatggccacctctacctgctgttagacatgggatcaggtactataaaaataaaa
gccttgcagaagaaggtgaatgatggtgaatggtaccatgtggactttcaaagggatgga
cggtcagggaccatatctgtgaacacattacgtacaccatatactgcaccaggggaaagt
gaaatccttgacttggatgatgacttgtatcttggaggcttaccagaaaataaagcaggt
ctggtcttcccaacagaggtgtggacagcgcttctcaattatggatatgttggctgcatt
agagatttatttattgatggccaaagcaaagatattcgacagatggctgaaattcaaagt
acagctggagtaaaaccctcatgctcaagagaaactgcaaagccatgccttagcaatccc
tgtaaaaacaatggtgtatgcagggatgggtggaacagatatgtttgtgattgctctggg
acagggtaccttggcagatcttgtgaaagagaggcaacaatattaagctatgatggaagt
atgtttatgaaaatacagctccctgttgtgatgcacacagaggcagaagatgtttcttta
cggttcaggtctcaacgagcttatggcattttaatggcaacaacttccagggagtctgcc
gataccctccggttggaattggatgcaggacgagttaaactaactgtcaacctagactgt
atcaggattaactgtaattccagcaaaggtccagaaaccctttttgctggctataacctc
aatgataatgagtggcacacagtgcgtgtggttcggcgaggaaaaagtttaaagttaatg
gtggatgaccagcaggccatgacaggtcaaatggctggtgatcacacacggctggaattc
cacaacatagagactggaataataacagaacgccgctacctgtcttctgtaccttctaat
ttcattggccatctacagagccttacatttaatggcatggcatacattgacttatgtaaa
aacggagacatcgattattgtgagctaaatgcaagatttgggttcagaaacatcatagca
gaccctgtaacctttaaaacaaaagcaagttatgttgcgttggccacattacaagcatat
acatctatgcacctttttttccagttcaaaaccacctctctggatggactgatactttat
aacagtggcgatggaaatgatttcattgtggttgagttagtaaaaggatatttacactat
gtgtttgacttgggaaatggtgccaatctcatcaaaggaagttctaataaacctctgaat
gacaaccagtggcataatgtgatgatatcaagggataccaacaatctccacactgtaaag
attgacacaaaaatcacaacacagagcacagcaggagccagaaatttagatctcaaaagt
gatttgtacattggaggagtggccaaagaaatgtacaagtccttaccaaagctggtgcat
gcaaaggagggttttcaaggctgtcttgcatcagttgatttgaatggacggctccctgat
ctaatctcagatgctctcttctgcaatgggcaaatagaaagaggatgtgaagttgcattg
atgaaagctgatttgcaaggccccagcacaacgtgccaagaggattcgtgtgcaaaccag
ggagtgtgcttgcagcagtgggatggattcagttgtgactgtagcatgacctcctttagc
ggaccattatgcaatgacccgggaacaacgtatatctttagcaaaggtggtggacaaatc
acttacacatggcctccgaatgatcgcccaagcactcgcgcagacagattggcaataggg
tttagtactgttcaaaaagaagccgtgttggtacgagtggacagttctactgggcttgga
gactatttagagctgcacattcaccagggaaaaattggagtaaaatttaatgttggaacg
gatgacatcgctatcgaagaaatcaacgcaatcattaatgatggaaaataccacgtagtg
cgtttcacaagaagtggtggcaatgccacattacaggtggacaactggccagttatcgaa
cgctacccagcaggacataaggttacggcaggtctatttgtagacagcagaagaaacaat
gataacgagcgcctggcgattgctagacagcgaattccatatcgacttggtcgagtagtt
gatgaatggctactcgacaaagggcgtcaactcacaatcttcaatagccaagcaaccata
aaaattggaggcaaggaacggggccatcctttccagggccagctctctggtctgtactac
aatggcttgaaagttctgaatatggcagcagaaaatgatgccaacatcgtgatagaagga
aatgtgagacttgttggtgaagtgccttcctccatgacaaccgagtccacagccacagcg
atgcaatctgagatgtcaacatcggtcatggaaaccaccaccactttggccacgagcacc
gctaggagaggaaaggccccaacaaaggaacctattggccagaccacagatgacatcctg
gtggcctcggctgaatgtcccagcgatgatgaggacattgatccctgtgagccgagctca
ggtgggttagcaaatcctaccagggcaggaggaggaagggagtatcctggctcatctgaa
gtgattcgtgaatccagcagcacaacaggcatggtagttgggatcgtggcggcggcagcg
ctgtgtatcctcatcctcctgtacgccatgtacaagtacaggaacagggacgaagggtcg
tatcacgtagacgagagtcgaaactacatcagtaactcagcacaatccaatggggctgta
atcaaggaaaaacagcccaacagcgctaaaagttccaacaaaaacaagaaaaataaggat
aaggagtactatgtctga
DBGET
integrated database retrieval system