Coturnix japonica (Japanese quail): 107310861 Help Entry 107310861         CDS       T04297                                  Symbol MSH6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism cjo  Coturnix japonica (Japanese quail) Pathway cjo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cjo00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     107310861 (MSH6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cjo03400]     107310861 (MSH6) DNA repair and recombination proteins [BR:cjo03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      107310861 (MSH6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  107310861 NCBI-ProteinID:  XP_015712384 UniProt:  A0A8C2SNQ3 LinkDB All DBs Position 3:10264338..10273087 Genome browser AA seq 1338 aa AA seqDB search MSRQSSLLRFFPKAQKRAVHTPPPAGRESRCRTAKEQNGTETNVRPAGRSKENGKADGAA AAGSGVSSVYSPGDLVWAKLEGYPWWPCLVYNHPTEETTVRGKGNSARIHVQFFDVSPTR GWVSIKYLRPYKGSSDREVLKGGMFYSTKPEIKKAMELADNAMSKEKTKRLELAVCNEPS DTEEETEQMSGSASGDSDDSNSEEDVKGNKRVPNSERAIKAKRRKVLDSDSDRDGSDVEF KPDVKEAASSEEASSGVDENEATDAETDAESIEESPIKIPSKRKRGNVSKPSKRSSLENE HSEAPKRVAPVSLEAKSKLTSFAAPENFESQANACSGGTSGFAAWEHEKLEWLQEGKKKD AHRRRQNDPDYDPCTLYVPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDA VIGVNELGLIFMKGSWAHSGFPETAFGRFSAILVQKGYKIARVEQTETPEMMEARCKATA HPTRFDRVVRREICRILTKGTQTYSIIDCDPSENHSKYLLCVKEKEDSSGQRVYGVCFVD TSVGKFYVGQFSDDRHCSRFRTLVAHYTPVQVLFEKGNLTVDTQKILKSSLISCIQEGLI SGTQFWSASKTLKVLLEEEYFKENQNPENGCVLPSVIKSLTSESDSLGLTPGEDSELALS ALGGIVFYLKKCLIDQELLSLANFEKYVPVDADSAKMASSSNSFARTDRRMVLDGVTLMN LEVLQNGTNGSTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPASINDRLDAVEDLLAVP AKLTEISEHLKKLPDLERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFFSAL EGFKVMNEIVNAMEEVASDFKSRVLKQLVTRKAKHPDGRFPDLSAELKRWDTAFDHNQAR KTGVITPKAGFDSDYDKALQDIKTAEEDLHTYLDKQRKLLGVKSMLYWGTGKNRYQMEIP ESATLRKLPEEYELKSSRKGYKRYWTKEIEKMLAELMNAEERRDAALKDCMRRLFYNFDR NSQDWQTAVQCMAVLDVLMSFANYSQDGDGPLCRPVILLPADGSPPFLELKSARHPCITK TFFGDDFIPNDIVIGSKDEDGGGGASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPA EVCRLTPIDRVFTRLGASDRIMAGESTFFVELSETSSILQHATEHSLVLVDELGRGTATF DGTAIASAVVRELAENIRCRTLFSTHYHSLVEDCSGSAAVRLGHMACMVENESEDPSQET ITFLYKFIEGACPKSYGFNAARLADIPEEVIQKGHRKAKEFEKKTMSLRIFRFLCRVVDG ASPDADGVGKLRLMLSHL NT seq 4017 nt NT seq  +upstreamnt  +downstreamnt atgtctcgtcagagctccctgctccgcttcttccccaaggcccagaagcgggccgtccac acccctccgcccgccggcagggagagccgctgccgcactgctaaggagcagaatggcact gagaccaacgtcaggcctgcggggcgtagcaaggagaatggcaaagcggatggagcggcc gccgcgggtagcggtgtctcttctgtttattctcccggggacttggtgtgggccaagttg gaaggatatccctggtggccgtgcctcgtctacaaccaccccacggaggaaaccactgtc agagggaaagggaactctgctcgcatccacgtgcagttctttgatgtcagtcccacgagg ggctgggtcagcatcaagtacctgaggccatacaaaggctcatcagacagagaggtgctg aagggaggaatgttttacagcacaaagcctgaaattaagaaagcaatggagctggcagat aatgcgatgagcaaagagaaaaccaagcggcttgagctggctgtgtgcaatgaaccttca gacactgaggaggaaacggagcaaatgagtggaagtgcttcaggcgacagtgatgacagc aatagtgaggaggatgtgaagggcaataagcgagtaccaaacagcgaaagggccataaaa gccaaaagaagaaaagtgctggattcggacagtgatcgtgatggttctgatgtagagttc aagcctgatgtgaaagaagcagcaagcagcgaggaagccagtagtggagtggatgaaaat gaagctactgacgctgagacagatgcagagagcattgaagaaagtcccataaaaatccct tctaaacggaagagaggaaatgttagcaagccttctaaaaggagtagcttagaaaatgaa cattctgaagcacccaaaagagtagcaccggtttcattagaagccaagtctaagctgacg tcatttgcagcacctgaaaattttgagtctcaggcaaatgcttgcagtggaggcacgagt ggctttgcagcatgggagcatgaaaagcttgagtggttgcaggaagggaaaaagaaagac gcacacaggaggcgacagaatgaccctgattatgacccatgtactttgtacgtacctgag gactacttgaacaaatgtacgcctggaatgcggaggtggtggcagctgaaaagtcaaaac tttgatgcggtgatttgctacaaagttggaaaattctatgaattgtatcacatggatgca gtcattggtgtgaatgagctgggcctgatttttatgaaaggctcgtgggctcattctggc tttccagagactgcgtttggcagattctctgctattctggttcagaagggctacaagata gctcgtgtcgagcaaacagaaactcctgaaatgatggaagcacgctgcaaggcaacggcc cacccaaccaggtttgacagggttgtacgccgggaaatctgcagaatccttaccaaaggg actcagacttacagcattatagactgtgatccttcagagaaccacagcaaataccttctg tgtgttaaggaaaaagaagactcctctggacagcgtgtttatggtgtctgttttgttgac acatcagttgggaagttttatgttggccagttctcagatgaccggcactgctcgaggttt aggactttagtggcgcattacactcccgtgcaggtcttgtttgagaagggaaacctgact gtggacactcagaagatactgaaaagctcgctcatttcttgcattcaggaggggctgatc tctggcacccagttctggagtgcttctaaaacactaaaggttcttcttgaggaagagtat ttcaaagagaaccaaaaccctgagaatgggtgtgttctgccctctgtaatcaaatctctg acttcagagagtgactcgctggggttaactcctggcgaagacagtgaattggctttgtca gctcttgggggaattgtcttctatctcaagaagtgtctgattgaccaggagctgctgtcg ctggcaaactttgagaagtatgtccctgtggatgctgatagcgcaaaaatggcgagttcc agtaattcctttgccagaactgaccggcgcatggtgctggatggagtcactctgatgaac ctggaagtcctgcagaatggaaccaatggaagcacggaaggcactttgttggagaggatt gattcctgctgtacaccgtttgggaagcggctcctgaagcagtggctttgtgctccgctt tgtaatcccgcatccatcaatgatcgtttagatgctgtcgaggaccttctggctgtgccg gcgaaactgactgaaattagtgagcacctgaagaaacttcctgaccttgaaaggctgctc agcaaaattcacagcattggatcgccgcttaaaagtcagaaccatcctgacagcagggcc atcttttatgaagagattaaatacagcaaaaagaaaattgctgactttttttctgcgttg gaggggtttaaagtaatgaatgaaattgtcaatgccatggaagaagttgccagtgacttc aaatctcgagtccttaagcagttagtcacccgcaaagccaaacatccagatggccgcttc ccagacttgagcgcagagctgaaaaggtgggacacggcttttgatcataaccaggctcgg aagacaggagtgatcactccaaaggcaggttttgactccgattatgataaagcactacag gatattaaaactgctgaggaggatttacatacttaccttgataagcaacgcaaactgctt ggggtcaaatccatgctgtactgggggacaggcaaaaatcgataccaaatggaaatacca gaatccgccacattgcgtaaactacctgaagaatatgagttgaagtcctccaggaaggga tacaaacgttactggaccaaggagattgagaagatgctggctgagctgatgaatgctgag gagcgaagagatgcggctctgaaggactgcatgaggcgtttgttttataactttgacagg aacagccaggactggcagacagccgtacagtgcatggctgtgctggatgtcttgatgtcc tttgctaactacagtcaagatggcgatggaccgctgtgccgacctgtaattctactgcct gcggatggttctcctcccttcctggaactgaaaagcgcacgccatccttgcattacaaaa actttctttggggatgactttattcctaatgacatcgtgataggcagtaaggatgaagat ggtggtggtggagcttcctgtgtgctagtcactggcccaaacatgggtggcaaatcgaca ctcatgagacaggctggtctcctggttataatggctcagctgggatgctacgtgcctgct gaggtctgcaggctcacacccatcgacagagtatttacacggctcggtgcctccgacaga atcatggcaggtgaaagtaccttctttgttgaattaagcgagacttccagcatcctgcag catgcaacagagcactccctggttctcgtggatgaacttggccgaggcacggctacgttt gatggaacagcgatagcgagcgcagtggtcagagaactggctgagaacatcaggtgtcgc acgctgttctccacgcattaccactccttggtggaggactgctcgggcagcgcagccgtg cggctcggacacatggcttgtatggtggaaaatgagagtgaagatccaagccaggaaaca attacctttctgtataaattcattgaaggagcgtgtcctaaaagctacggcttcaatgca gcgaggcttgctgacatcccagaggaagtcattcagaaagggcacagaaaggcaaaagag tttgagaaaaagaccatgtcactgaggatattcaggtttctgtgccgggtggtggacggt gcaagtcctgatgcggatggggtggggaagctgagattgatgctcagtcacctctga

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