Coturnix japonica (Japanese quail): 107311575
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Entry
107311575 CDS
T04297
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjo03019
]
107311575 (ZC3H12D)
Messenger RNA biogenesis [BR:
cjo03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
107311575 (ZC3H12D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1_C
DTP-pb9_B-dom
Motif
Other DBs
NCBI-GeneID:
107311575
NCBI-ProteinID:
XP_015713670
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Position
3:complement(43298456..43311834)
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AA seq
615 aa
AA seq
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MPARMALTSSFSSKLVQPGSGGVSTAGREVHQSKLDFFCKLGYGKQDICKVLESLGQEAL
EDDVLKELIRMGRKPQALENQAQPPPLKLVARGTCSTSPVPKWLAEEEGDSSSHLRAIVI
DGSNVAMSHGNKEVFSCWGIRLAVDWFRERGHTYIKVFVPLWRKEPPRQDSPIADQHILE
ELEKQSILVYTPSRKVKGKRVVCYDDRYIVKVAYEKDGVIVSNDHYRDLQNENPEWKWFI
EQRLLMYSFVSNRFMPPDDPLGRHGPTLYNFLSKKPALPESTWQPCPYGKKCTYGNKCKF
YHPERLHQAQLSVADELRARTKVPMSLGREEETCNCSPYWTGRESIPHDTVTEMPQGASR
GMRDPCCAAWSSGSFHPQPADAWAISTNSGLELDRKPPEALRDQPLVGDMAALSISDKVY
SGTRLTCTSQDREQSDSPHCCCSLRHNPFLLHHHHCLDCTCLSGSPFQHSVLPPAPGRHL
EHHWPQKCWSDRVQPSPALEAQQQQHLPPSSVMPLAEPLQVYRERPQCCFSSQPFLLDAS
SRPDFFQKATVQPSAAYCDYWPPHAARPPSVQQASVHRELCTIFPCAEVNRVMALYPEIK
DIASLTLLIQRHRNL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctaggatggccctgaccagttcattttccagcaagctggtacaaccaggctct
ggaggagtttctacagcagggagagaagtgcaccagagcaagctggattttttctgcaag
ctaggctatgggaagcaggacatctgcaaagtgctggagagcctgggccaggaggccctg
gaggacgatgtgctcaaagagctgattcggatggggagaaaacctcaagctctggagaat
caggctcagcctcccccactaaaacttgttgcccgtgggacgtgcagcacttcaccagtg
ccaaaatggcttgcagaagaggaaggtgattcctccagtcacttgagagccattgtgatt
gatggcagcaacgtagcaatgagccatggaaacaaagaagtcttctcctgctgggggatc
cgcctggcagtggactggttccgagaaagggggcacacctacatcaaggtttttgtcccc
ctctggaggaaggagcccccccgacaagacagtcccattgcggatcagcacattcttgaa
gagcttgaaaagcaatcaattcttgtgtacaccccatctcgcaaggtgaaaggcaagaga
gtagtttgctacgacgatcgctatattgtgaaggtcgcttatgaaaaagatggggtcatt
gtttccaatgaccattaccgagatctccagaatgaaaatcctgagtggaaatggtttata
gagcagcgactactcatgtactcttttgtcagtaataggtttatgcctcctgatgatcca
ctaggccggcatggacccactctttataatttcctcagcaaaaagccagcgcttcccgaa
tcaacatggcagccttgcccctacggtaaaaaatgcacttacggtaacaaatgcaagttt
taccacccagagaggctgcatcaagctcagctgtcagttgctgatgagctcagagccaga
acaaaagtacccatgagcctggggagggaggaagagacgtgcaactgctctccatattgg
actggcagagagtccatccctcatgacactgtcacagaaatgccacagggagccagcagg
ggcatgagggacccctgctgcgcagcatggtcctcaggcagcttccatccacagccagct
gatgcctgggccatcagcaccaactctggcctggagctggaccgaaaaccaccagaagcc
ctcagagatcaaccccttgtgggagacatggcagcactctccataagtgacaaggtgtac
tctggaaccagactgacctgcacctcacaggacagagagcagtctgacagccctcattgc
tgttgtagcctgaggcacaacccctttctgctgcaccatcaccactgcttggactgcacc
tgcttatcagggagtcccttccagcactcagtgctcccacctgctccaggcaggcacctg
gaacaccactggccccagaagtgctggtctgacagggtccagcccagcccagccctggaa
gcacagcagcagcagcacctccctccatcctctgtgatgcctctggctgagccactgcaa
gtgtacagagagcggccccagtgctgtttctccagccagccctttctgctggatgccagc
agcaggcctgatttcttccagaaagccactgttcagcccagtgctgcttactgtgattac
tggccaccccatgctgcaagacctccttctgtccagcaagcaagcgtccacagggagctg
tgcactattttcccctgtgccgaagtgaatcgagtcatggcgctgtacccagagatcaag
gatatcgctagcttgaccttactgattcaaagacatagaaacttgtga
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