Coturnix japonica (Japanese quail): 107311690
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Entry
107311690 CDS
T04297
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107311690 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjo03019
]
107311690 (HBS1L)
Messenger RNA biogenesis [BR:
cjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107311690 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
GIP1_N
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
107311690
NCBI-ProteinID:
XP_015713917
LinkDB
All DBs
Position
3:50456280..50518767
Genome browser
AA seq
685 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLEEEYS
YEDTEDTDFTSNHQLTEVDRARLSSCLDQMREVLAESVPDQAMMQAVLDSKFDVQKALDL
VLSQDTKQNVKTKDEDAVIVRKTTKGKPRDSQSSRMESEIVPKVTKMTVSGKKQSMGFEV
PCVITEENGHVTTPQKGLPVEDASVTPRVPEAVSKPAPSSQVVQVSEEQNTVPTPVKKTS
KTKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGA
AQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVSWQQERFQ
EITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQSSDLTKWYQGKCLLEQIDSFKP
PQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLHDE
PVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPVKVCTRFRARILIFNIEIPVTKGFP
VLLHYQTVSEPATIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELETQRPVAVELYKDF
KELGRFMLRYSGSTIAAGVITEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtccgaggctacaactacgacgaagattttgaggatgatgat
gtgtatggccagtcagtagaagatgattattgcatttctccttctacagcagctcagttt
atctactccagacgagacaaaccagctacgtttgctgagccgttggaggaggaatatagt
tatgaggatacggaagatactgattttacgtccaaccatcagttgactgaagttgataga
gctcgtcttagttcatgccttgatcaaatgagagaagttttggcagagtctgtaccagat
caagcaatgatgcaagccgtattggatagtaaatttgatgtacagaaggctttggatctt
gtgctttcacaagacactaagcaaaatgtgaagaccaaggatgaggatgctgtgattgta
agaaagacaacaaaaggaaaaccaagggattcccagtcatctagaatggaatctgaaatt
gtgccgaaagttaccaaaatgacagtgtctggaaagaaacagtcgatgggatttgaagtt
ccatgcgtgattactgaagaaaatggccatgttaccacacctcagaaaggactgccagtt
gaagatgccagtgtaactcctagggtgcctgaggcagtgtcaaaacctgctccttcatcc
caagtagtgcaggtttcagaagagcagaatacagtgcctactccagtgaaaaaaacaagc
aagacaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggaggaaaacaa
ctacttaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatgggccat
ctactctacctcttgggaaatgtgaacaaaagaactatgcacaaatatgaacaggaatct
aagaaggctggcaaagcttcatttgcgtatgcatgggtcttggatgaaactggggaagaa
agagaaaggggagtaacaatggatgtgggtatgaccaaatttgagacgaagactaaagta
attactctgatggatgctccaggccacaaagacttcattccaaatatgatcacaggagct
gcacaggctgatgtggctattttggttgtggacgccagcagaggagaatttgaagcagga
tttgagacaggtggacaaactcgagaacatggattattagtgcgctctcttggagtcaca
cagttagctgttgcagtcaataaaatggaccaggtcagttggcaacaagaaagattccag
gagattaccagtaagcttggccagtttctaaaacaagctggcttcaaggaatctgatgtg
gcttatattccaacaagtggtcttggtggtgaaaatctagtcacgagaagtcagtcaagt
gacctcacaaaatggtatcaagggaagtgtttgttagagcaaattgattctttcaagcca
ccgcaaagatcagtggacaaaccatttagattgtgtgttgctgatgtttttaaagaccaa
ggatcaggattctgtgtgactggaaaaatagaagctggctatattcaagttggagaacga
cttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacacttcacgatgaa
ccggttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatggatatc
atcaaaatcaatgttggctgtgtattttgtgatcccaaggaacctgttaaagtttgcact
cgattcagagctcggattctcatcttcaatattgagattccagtcaccaaaggattccct
gtgcttttacactatcaaacagtaagtgaacctgctactattagaagactgttgagtgtc
ctgcataaaagcactggtgaagtgacaaagaaaaaacctaagttcctgactaaaggacag
aacgctttaatagaactagaaactcaaaggccagttgctgtagagttgtataaagatttt
aaagagcttgggaggtttatgttacgctacagtggttccacgattgctgcaggagttatc
acagagattaaagaatga
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