Coturnix japonica (Japanese quail): 107311838
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Entry
107311838 CDS
T04297
Symbol
CFAP54
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cjo03037
]
107311838 (CFAP54)
Cilium and associated proteins [BR:
cjo03037
]
Motile cilia and associated proteins
Sperm associated proteins
107311838 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Med9
Motif
Other DBs
NCBI-GeneID:
107311838
NCBI-ProteinID:
XP_015714190
LinkDB
All DBs
Position
1:41784585..41884595
Genome browser
AA seq
3231 aa
AA seq
DB search
MALLTPGCCEAQPGHAGTRGSSATAVSSGNGRAAISPPPLPGDAAASPPLPGRSMAEPTE
PPPLAPPPRPLPADFFGAVVPGNPVVDSLEAELRDVLGFLRRLRGTWESEPQRHELHRRG
ANALFNTWIRYKPRLPDWYYNDKLVEVGDSLTQIKEYKLALTQCYGRYLQQFCSVNPDDI
PADENQLKSTFFPNGFRDENAALTFHALQERNVCVYQMVCSNDRNLQKQESLQACFKVLS
SLRLTMQVALPQQNLCWLVYNGTIHIYTICRHLMTIGQSAKVLEYLLWASVCMELSIPLL
SVHYLTWRATLYAAVSQCYYDCQAGIHGEVFARRGLLQIDELKQLENISSSQTSSETEKI
FREATIKMSVMIFKRAVFESRRKPKSQSRTKLRVSLKESQNSSGPRTTTERLLTEMFDGT
AAQFLAILEALSDSSRRVLHPTPPVPDEPEICDVISELLLAGLEILSGGVSSTDVQGDDC
TDKFGIIDASSTLLQLILTGEKRVSGEAAVKFVKLAFNYEEWDVFDPAIEFVTNFLQAQN
DPRWKKAELELKLLTSMRPFLFPRKFRHGFSVSESSTRINRTPRVSIKKSSVQIRRSSLK
NEEPSRDLNVLATTVFSCVSASKQNILPDKEILFDVLSFLWQKCKTGLQLIQTNGSGYFK
YNHKHKASKWVRVLWIINEVILQSNVADTDVVMVAEITLCLTAILESMADSSIKSKKNAG
KRSVILSEDETCDFPEILKRSPTEQLQLAYEYLEKTINEMNKSRLMTFQQDGKSIFDSCC
TKMGSHVQNLSSDLEWSSDRTRTGNHFLMDLHLELIQAQHRIAVKILKLTQGVQKDGRSL
KSSKYQVKNTEDSHYLTEADIMGKIKKNKLSRAIFLMEKAVQVFPKDLSTSSQRQLLKEA
LTLIEQVEAEQSALYHSLKEFKSGKKKSKIPPPPLLLSRSHCSMTFKPASFSSDVQVAWY
TILGCVAGENNQKVRLNHNKLPNAGEEIPADGKSLLEIQDLDPNEEYIFAVAAYSSDGKL
IGNATGETTRPILAYPPLSATIVRAYLTQAAYQTGNYMLAKGAFSPMWDYFVSNSSALPT
NAAVISARSTLTISEKRLRFEVICQTSPITLYLFLRNIFVICDINIMEGTLFCDSICCNE
ILYKEQVSRLAQCERMSVAIELSSFLNDASYALQSVVQCYGLLAPLIYHKISAVPVVQIL
IKCLAVLQEIPNATLQRRQEGCYESIQHMIACTSFYTAKVLRSWKEYELAVVIVNYGKKL
LGSSQTTTPGQPGAKETEEARKIKKISSKMSQLAAMEKATENLNALESNLLKLTQPARVS
KLGGQEDPLFLYPIISCWTSNNAYREVMKFKKQSRFLEFFIQVLHKILNEEQFHSVLEWA
ENVQTDLKRRNNHLLGISETPGQKSVSPSEPEGTKTSSAGAKESQKSTKSPSEKKKEASA
SKKQRKETPSPTRKGPTLRQFLEKHPDIMNSPEEQRKHMEELEKLAHKTLVILLKPIVSN
YLNRKQFHQICLEEMPWRSQMNIYLAIAHYNLFTKKLEEQYNIGICGSHHQDSYNILDPE
IFSLNNSGTVVVREAVENNRRTSNPLPLEKSPSAMTKKQTGTDRSSEHSTKLKARDTPQT
RMTKDKKRSLSLSPKERKQFPSNTILLDHFTKTFLHLRRAAVLAHRGGHWTLLQNACREL
WNYTQESQSIANHSYSHKDAFPITRQFLRNTVWLPFYLASDMLIDMITELQASNSLKIVE
PEGDFCIPSCLGGTTSENGGSNLHPQSPLDDVNVVDLKWICNLILKTLEFLYKMKKWEAL
VHIALQFNVFTHERYTEQVSPLLVYAQRQLLERIQQFSGPDSNESHFTKYLSSNINKMSC
RDYIGQNLQPPVAHSDSILVFSGCFFDPETKNDYADGSEAKPTVYVPLDVNDALKCFRET
LQKSKYHSRALRHSRKLLSLFLASTQENVGRTTSTPNRRLEFDVGAELAFLPTPSDLSQE
KFNFSSSIESKPIPQSQFSLVVSSYEETIEILDNQRDLKVQALHELGNLHFYAGNKRAAF
KYWCQALDETLNTVNILNTWQELDFPKNTTECFAVGRSTNISQKFLSQAGIWGCLHAAVL
VAKIAQYVTTSNVRLRTKYCHFSAILFKTLFRASLPHPTSDCDFAQYETHMLIPGIDLFS
DRYRADISTVVASLNFLMFELHCAKRNLTILPLFTLYQYFVSEICKDPTKSIEGRIFKIK
VLTDLGFFTEAFNELYLLNYGERIPWKIPAGYKQNEEMKNFLYFDSSKPLLNSTNLQVLE
DIFNWSLSLTIVPLCNQQIMNKLILAKMHFIICLSATINNIPEKVEKCIYSVDGKTPGNV
KGDSVKNSRQREQRGTVMQLIDCKAELNMTMLKGILLTEAEESLNLLVQNIQDKYDGKVS
QCSAEDLEVLIEAKLQLAAISQQWHRAALSVALAFSAIQLLQDADIFRMTATNFQEKKDK
RESLDPCVEDDQETHSAIAQDHLNIHLWQRCRRMLVTALATQLRHVGDKEEKYVAERRSI
IKEVILESEAFRDTETQAEMMVQAAILDLQEGCPVADIKLILQNIISLLQEDKFISPPAS
LTLVKSMLLMADMLELQRAENMEYCSSAVEPLNILNLAHEITLKEIFFCGECIEQQIEDR
TLSCLILPAKNIYLPYINLLAQVKMRIGNTLAERVACTPEREDPLQWLPALKHLETALKL
CRASATKVLDMEAQLLFQIGKVECQITKAGNNKSYQAVETLLEAIKLSQQHDQNFELIRR
SYLEIALLYLHFATNNENLSQRDKVIPSESEISAGEYSSSPGEALKSEGYKVRAWIAVRA
ARQVSEAVVASQLLIGMENVKERNVEDAEEQKIPEFASMDLLASYIDYLSDGYSVVCGSR
TSSSTENKQITQKEQNQNEGMECLDASSSQKKEITTWAHLIRYHSYIKGLCHTNLFAAHE
SELGSLSGRDGHSNSPFNSWIVLRVAEMHSFLRKHLLEYSVCCLENSPEQLQDLEASHVC
PSDSSKTSLEDSGISPKVSCVKMASLDSVITEAGSQMESRAANASNKEISIQWYIPPLAK
PTDDTETQILLLYAYNTEPVKISNFKFFSSVSVFSGQLWIPLARIISLREKLSTLKHQVE
MLMQSSGNSSAAEPTSFIEQNETLETTPSEKAEMNIAGVHLDEKTEEMATRCLSELKALL
SAVPVLTLPLTEIPFDITLQSIASLEDMFDLANGCTITEESLFSWIISLFQ
NT seq
9696 nt
NT seq
+upstream
nt +downstream
nt
atggcactgctgacaccggggtgctgtgaggcacagccgggacacgcggggacaaggggc
tccagcgccacagctgtgtcctctgggaacggccgggccgccatctccccgccgccgttg
cctggcgacgccgccgcgtcccctccgctcccgggccggagcatggcggagcccacagaa
ccgccgcccctcgctccgccgccgcggccgctgccggctgatttcttcggggccgtggta
ccgggcaaccccgtggtggacagcctggaggccgaactgcgggacgtcctgggcttcctg
cggcggctgagaggcacatgggagtccgagcctcagcggcacgagctgcaccgccgcgga
gcaaatgctctgtttaatacctggatcagatacaagcctcggctgccagactggtattac
aatgacaaacttgtggaagttggtgattcccttactcagatcaaagagtataagttggca
cttactcagtgctatggaaggtaccttcagcagttctgttctgtaaaccctgatgacatc
ccagctgatgaaaatcaattaaaatccacttttttcccaaatggtttcagagatgaaaat
gcagctcttacgttccatgctttgcaagagaggaatgtttgcgtttatcagatggtttgt
agcaatgacagaaatcttcagaaacaagaatccctgcaggcttgtttcaaagtcttgtca
tcattacgactcaccatgcaagtggctctacctcagcagaatttgtgttggcttgtctac
aatggtacgattcatatttataccatatgcagacatttgatgacgataggtcagtctgct
aaggtactggaatatctactgtgggccagtgtatgtatggaattatccattccactctta
tctgtacattatttgacatggagagctaccctatatgctgcagtttctcagtgttattat
gattgtcaagccggcattcatggagaggtatttgctcgtcgtggtctgcttcaaatcgat
gaactgaagcaattagaaaatatcagttcttcgcagacaagttcagaaacagaaaagatt
tttagagaggccactataaagatgtcagtaatgattttcaaaagagcagtatttgaatcc
agaagaaagccaaaaagccagtcacgaactaagttaagagttagcttgaaagaatcacaa
aattcgtcagggcctcgcaccactactgaacggctgctgacagaaatgtttgatggtact
gcagctcagttccttgccatcctggaagctctatctgatagcagtaggcgcgtgctgcac
cctactccacctgttcccgatgaacctgaaatctgtgatgtgatttcagagcttttactt
gcaggcctggaaatcctctcaggtggagtgagcagtactgatgttcaaggtgatgactgc
actgataaatttggtataattgatgcatcatcaactcttctgcagctgatactaacagga
gaaaagagagtgtctggagaggctgctgtgaagtttgtaaaattagctttcaactatgaa
gagtgggatgtgtttgatcctgctattgaatttgttactaattttcttcaggctcagaat
gacccaagatggaagaaggcagaactggaactcaaacttcttacctcaatgcgaccattc
ctatttccaagaaaatttaggcatggtttttctgttagtgaaagcagtaccaggatcaat
cgcactcctcgtgtttctattaagaagagcagtgttcagataagaagaagttccttaaag
aatgaagagccttctcgtgatcttaacgttttggcaacaacagtgttttcctgtgtctct
gcatctaagcagaatatcctacctgacaaagaaattctttttgatgtcctcagctttttg
tggcagaagtgtaaaacaggacttcagttaatccagacgaatggaagtggctactttaaa
tataaccacaaacacaaagcttccaaatgggttcgtgtactctggataataaatgaagta
attctgcaaagtaatgtagcagacactgatgttgtaatggtagcagagataaccttatgt
ctcactgcaatactggaaagtatggctgattcctcaattaaatctaagaaaaatgcagga
aaaagaagtgtaattctctctgaagatgaaacctgtgactttcctgaaatattaaagaga
agtcctacagaacaactgcagcttgcttatgaatatcttgaaaaaacaattaatgaaatg
aacaaatctcgcttaatgacctttcaacaagatggaaagtcaatatttgatagctgctgt
acaaagatgggctcacatgtccagaatttgagttctgacttggaatggagtagtgatagg
acaagaacaggaaatcattttttaatggatttacacttggagctcattcaggctcaacat
cgaatagctgtgaaaattcttaaactgacacaaggtgttcaaaaggatggaagaagtctt
aagtctagcaagtatcaagtaaagaatactgaagattcccattatttaacagaggcagat
ataatgggaaaaataaagaagaataagttatcaagagcaatctttttgatggaaaaagct
gtacaggtgttccctaaagacttaagtacttcctcccaaaggcagctactgaaggaggca
ctaactttaattgaacaagttgaagctgaacaaagtgcattgtatcacagtctcaaagaa
tttaagagcggcaagaaaaaaagcaagattcctcctcctcctctattactttctagatca
cattgctccatgacatttaaaccagcctcattctcctcagatgttcaggttgcatggtac
actattttgggctgtgtagcaggagaaaataatcagaaagtaagattaaatcacaacaaa
cttccaaatgctggagaagagataccagctgatggaaaaagcctattggaaatacaagac
ttagatcccaatgaggaatacatatttgctgttgcagcatattcttctgatggaaaactt
attggcaacgcgactggggaaacaactaggccaatcctcgcatatccaccgctttctgct
actattgttcgagcttatctaactcaggcagcctatcagactggcaactacatgttagcc
aaaggagcattttcaccgatgtgggattattttgtttcaaattcttctgcactgcccacc
aatgcagctgttatttctgcaagaagtactttgactatatctgaaaagaggttacgtttc
gaggttatatgtcagacttctcctatcaccttgtatctctttctgaggaatatatttgtt
atatgtgacattaatatcatggaaggaacactcttctgtgattccatttgttgcaatgag
atactttataaggaacaagtcagtagattagcacaatgtgaaagaatgtctgtggcaatt
gaacttagtagtttcttgaatgatgcaagttatgcactgcagtcagtcgtacaatgctat
ggtctccttgctccacttatttatcacaagatttctgcagttccagtagttcagattctc
attaagtgcttggctgttcttcaagaaattccaaatgctactttgcaaaggagacaggaa
ggatgttatgagagtattcagcatatgatagcttgtacttcattttatacagcaaaggtt
ctacgttcatggaaagaatatgaactagcagtagttattgttaactatgggaaaaaattg
ttgggttcctcacaaacaaccacacctggccaaccaggagctaaagaaactgaagaagca
cgcaaaattaagaaaatttcttcaaagatgtcccaattagctgcaatggaaaaagcaaca
gaaaatctaaatgctcttgaatcaaatctcctaaaactgacacaaccagctcgtgtgtca
aagcttggaggacaggaagatcctttgttcctctaccctataatttcatgttggacatca
aacaatgcttatcgagaagtgatgaaattcaaaaaacaatcgcgttttctggagttcttt
attcaagttttgcacaaaatcctgaatgaagagcaatttcacagtgttctggaatgggca
gaaaatgtgcaaacagacttgaaaaggaggaacaaccatcttcttggcatcagtgaaacg
ccaggacaaaaatcagtttctcccagtgagcctgagggcaccaagacgtcctctgcagga
gctaaggagtcccagaagagtacgaagtccccatctgaaaagaagaaggaagcatcagct
tcaaagaagcaaagaaaagaaaccccgagtcccactagaaaagggccaactcttagacag
tttcttgagaaacatccagacataatgaattctccagaagaacaaaggaaacatatggaa
gaattagaaaaattagctcataaaaccttagtgatactgctgaaaccaattgtgagtaat
tacttaaaccgaaagcagttccatcaaatatgtcttgaagagatgccttggaggtcccag
atgaatatttatctggcgattgcacactacaacttatttacaaagaaactagaagaacaa
tataacattggaatttgtggttcacatcaccaggacagttacaatattctagatcctgaa
atattctcattaaataattctggaactgtagtggtgagagaagctgtggagaataacaga
agaacttcaaatcctcttcctcttgagaagtcaccatcagccatgaccaaaaaacaaaca
ggtacagatagatcttctgagcacagcactaaactaaaggcaagagatactcctcaaact
cgaatgacaaaagataagaaaagatccctctcactttctcccaaagaacgcaagcagttt
ccatcaaataccattttattggaccattttacaaaaacctttctacatttaagaagagca
gcggttcttgctcaccgtggaggacactggacattgcttcaaaatgcatgcagagaactg
tggaactacactcaagaatcacagtcaattgctaaccattcctattcccacaaggatgca
tttcccattaccaggcagtttcttaggaacacagtttggttgccattttatttggcatcg
gacatgcttattgatatgataactgaactacaagcaagcaattctcttaagattgtggag
cctgaaggagatttctgcattcccagttgcttaggaggtactactagtgagaatggtggt
tcgaatctccatccacagtctcccctggatgatgtgaatgtggttgacttgaaatggata
tgtaatctgattcttaaaacattagaatttttgtataaaatgaagaaatgggaagcactg
gtacacatagctctacagtttaatgtctttacacatgagagatatacagaacaagtgagt
ccattgctggtgtacgctcagaggcaactactggaaaggatacagcagttcagtggccca
gacagcaatgaatctcatttcacaaagtatctatccagtaacataaataagatgagctgc
agagactacataggacagaatctacagccacctgttgcacattctgatagtatactggtc
ttttctggctgcttttttgatcctgagacaaaaaatgactatgcagatggcagtgaagct
aaacccacagtttatgtaccccttgatgtaaatgacgcactgaaatgttttagagaaact
ttacaaaaatctaaataccacagcagagcattgagacacagcagaaaactgctttcactt
tttcttgcatccacacaagaaaatgttggaagaacaaccagcactccaaatagaaggctg
gaatttgatgtgggagccgaattggcatttctaccaacaccaagtgacctttctcaagaa
aaatttaatttctccagtagcatcgagagtaaaccaataccacagtcacagttttcatta
gttgtctcttcctatgaagaaacaattgaaatcctggacaaccagagagacctcaaagtt
caggctctacatgaacttggaaatcttcacttttatgctggaaacaaaagagctgctttt
aaatattggtgtcaagcccttgatgaaacactcaacactgtgaatattcttaacacctgg
caagagttagactttccaaaaaatactacggagtgctttgcagttggaagatctacgaat
attagtcagaaatttctttctcaggctggaatttggggatgtttgcatgcagcagtttta
gtagctaagatagctcagtatgtaacaacatcaaatgtgagattaagaactaaatattgc
cacttttctgctatactctttaagactctgtttagagcctctcttccacatcccacatct
gactgtgactttgcacagtatgaaacacatatgcttattcctggaattgacttgttctct
gatcgctacagagctgatatctctactgtagttgcaagtctgaatttccttatgtttgaa
ttgcattgtgcaaaacgaaatttaacaattttacctttgttcacattataccaatacttt
gtttctgagatttgtaaggaccccactaaaagcattgaaggaagaatcttcaagattaaa
gtacttacagatttaggattttttacagaggctttcaatgaactgtatttacttaattat
ggagaaagaatcccatggaaaataccagcagggtacaaacaaaatgaagaaatgaagaac
ttcctgtactttgactcctcaaaaccactcctgaattctacaaatttacaggtcctggag
gacatatttaattggagtctgtctctaacaatagtgccactgtgcaaccaacaaatcatg
aataaattaatcttagccaaaatgcatttcatcatttgcctttctgccacaataaataat
atacctgaaaaagtagaaaaatgcatatattctgttgatggaaaaacaccagggaatgta
aaaggtgattctgttaagaattcaagacaacgggaacaaagaggcacagtgatgcagctt
attgactgtaaagctgaattaaatatgaccatgctgaagggaattctgttaacagaagct
gaagaaagtcttaaccttcttgtgcagaacatacaggacaaatatgatgggaaggtatcc
cagtgttctgcagaagatttagaggttcttattgaagccaaacttcagcttgcagctatt
tctcagcagtggcaccgagcagctctcagtgttgctttggctttctctgcaattcagctt
ctccaagatgcagatatttttaggatgacagcaacaaattttcaagaaaaaaaagataaa
agggagagtttggatccttgtgttgaagatgaccaagagactcacagtgctatagcccaa
gatcatctgaatatacatctgtggcaaaggtgtcgtagaatgttagttactgcactagca
acacagctacgccatgttggtgataaggaagaaaagtatgtggccgaacgcagaagtatt
ataaaagaagtaatattagagtcagaagcctttcgtgatactgagactcaggctgaaatg
atggttcaagcagcaattcttgacctgcaagaaggatgtcctgtggctgacattaaactt
attttacagaatatcatcagtttactgcaagaggataaatttatttctcctccagcttct
ttgacgcttgtgaaaagtatgcttctgatggcagacatgctagagctgcaaagagcagag
aatatggaatattgttcttctgcagtggaaccattaaacatattaaatttggcacatgaa
atcaccttgaaagaaatttttttttgtggagaatgtattgaacagcagatagaagacaga
acattgtcctgccttatcctgcctgcaaaaaatatctacttgccctacataaaccttcta
gcccaggtcaaaatgagaattggaaacacattagctgaaagagtagcttgcacacctgaa
agggaagatccgctgcaatggttacctgctctcaaacatctagaaacagcactgaagctt
tgcagggcatctgcaacaaaagtattagatatggaagctcaacttctttttcagataggt
aaggtggaatgccagataaccaaagcaggcaataacaagtcttatcaagctgttgaaacc
ctgttggaagctataaaactgagccagcagcatgatcaaaactttgagttaataagaaga
tcataccttgaaatagcactactgtatttgcattttgccacaaataatgagaatttgtca
caaagagataaggtgatcccttcagaatcagagatctctgctggagaatactcttcctct
cccggtgaggctctgaaatcagaaggctacaaagtacgagcttggattgcagtaagagca
gccagacaggtcagtgaagcagtggttgcctctcagctgttaattggaatggagaacgtt
aaagaacgcaatgtggaggatgcagaagagcagaaaattccagaatttgcttccatggat
cttcttgcttcatacatagattacttgtctgatggatacagcgttgtctgtggaagtcgt
acatcatcgtctactgaaaataaacaaatcacacagaaggagcagaaccaaaatgaagga
atggaatgtcttgacgccagctccagccagaagaaagagataacaacatgggctcaccta
attcgctaccacagttatataaaagggctttgtcacacaaacctatttgctgcccatgaa
tcagaacttggatctctttctggaagagacggacactcaaattctcctttcaactcatgg
attgttctgcgtgtcgcagaaatgcattcctttctcagaaaacacttacttgaatactcg
gtgtgttgtctcgagaattccccagaacagctacaagatttagaggcgtcacatgtttgt
ccgtctgattcttcaaagacgtctcttgaagattctggaatttcaccaaaggtgtcatgt
gtgaagatggcttctctggattctgtcatcacagaagcaggcagtcagatggagagtagg
gcggcaaatgcttcaaataaagaaattagcattcagtggtatattcctcctctggcaaag
ccaaccgatgacacagagactcagattttgctgctttatgcttataatacagagcctgtc
aagatcagcaatttcaagtttttcagttcagtgtccgtgttttcaggtcagttgtggatt
ccattagcaagaattatttctctaagagagaaactatctactctgaaacatcaagttgaa
atgctgatgcaaagttcgggaaactcttcagctgcagaaccaacaagttttattgaacag
aatgaaaccctggaaacaactccttcggaaaaagctgaaatgaatattgcaggagtgcat
cttgatgaaaaaacagaagaaatggctacgaggtgcttatctgaactcaaagctctgctc
tctgctgttccagtcctgaccttgccattaactgagattccatttgacattactttgcaa
tcaatagcaagcttggaagatatgtttgatcttgcaaatggatgcacaataactgaagaa
agtcttttcagttggatcatttctcttttccagtaa
DBGET
integrated database retrieval system
