Coturnix japonica (Japanese quail): 107312220
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Entry
107312220 CDS
T04297
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107312220 (DDX1)
03016 Transfer RNA biogenesis [BR:
cjo03016
]
107312220 (DDX1)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107312220 (DDX1)
Spliceosome [BR:
cjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107312220 (DDX1)
Transfer RNA biogenesis [BR:
cjo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
107312220 (DDX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
107312220
NCBI-ProteinID:
XP_015714935
UniProt:
A0A8C2TFU6
LinkDB
All DBs
Position
3
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEFPPHIRNQPLFAACVLKNAELKF
NFGEEDFKFPPKDGYIGLCKAPDGNVVKSQHTGNAQVVQTQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVIVNPKTDKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTISQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttctcggaaatgggtgttatgcctgaaatagctcaagcagtggaggagatg
gattggcttcttcctacagatattcaagcagaatctatcccattgattctgggaggtggt
gatgtactcatggctgcagaaacagggagtggaaaaactggtgctttcagcattccagtt
atccaaattgtgtatgaaacactgaaggaccaaatggaagggaagaaagggaaggcaact
attaaaactggtggggcagtgctcaacaaatggcagatgaacccatatgacagaggatca
gcttttgcaattggatcagatggtctgtgttgtcaaagcagagaagtaaaagaatggcat
ggatgcagagcaactagaggtgtgactaaaggaaaatactactacgaagtgtcttgtcat
gaccaaggcttgtgcagagttggttggtcaacaatgcaggcttcactagatttgggtact
gataaatttggttttggatttggtggaactggtaagaagtctcacaacaagcaatttgac
agctatggtgaggaattcaccatgcatgatacaattggatgttatctagacatagataaa
ggacaaattaaattttccaaaaatgggaaagaccttggccttgcatttgaattcccacca
catataaggaaccagccactttttgcagcttgtgtgctgaagaatgctgaattgaaattc
aattttggtgaagaagacttcaagtttccaccaaaagatggctatattggtctttgcaaa
gctcctgatggtaatgttgtaaaatcacaacatacaggaaatgcacaggtggttcaaaca
cagaaccttccaaatgctccaaaagcgttgattgtagaaccatctagagagctggcagaa
caaactttgaacaatgtgaagcagtttaaaaaatacattgataatcccaagttaagggag
ctattgattattggtggagttgctgcaagagatcaactttctgtgctggaacaaggagtg
gatattgtcgttggaactcctggaagactggatgacttggtctcaacaggaaaacttaat
ttatctcaagttagattcctcgttctggatgaagctgatggccttcttcttcaaggttat
tcagatttcataaacaggatccacagccaaattccacagataacttcagatggcaagaga
cttcaggtgattgtgtgctctgcaacactacattcttttgatgtgaaaaaactatctgaa
aagatcatgcattttcctacctgggttgatttgaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgattgtaaatcccaaaacagacaaactctgggaaaggcttggc
aagaatcatatcagaactgatgaagtacatgcaaaggacaatacacgacctggtgcaaac
actccagaaatgtggtcagaagctatcaaaatcctaaagggagagtacactgttcgggca
atcaaggaacacaagatggaccaggccattattttctgcaggacaaaaatagattgtgat
aatatggagcaatacttcatccagcagggcggaggccctgataggaaaggacatcagttc
tcatgtgtctgtctgcatggtgacagaaaacctcaagaaagaaagcagaacctggaaaga
tttaagagaggagatgtccgtttcttgatctgcacagatgttgcagctagaggaattgat
attcacggtgttccctatgttataaacgtcacactccctgatgaaaaacagaactatgtt
catcgaattggaagagtaggcagagctgaaaggatgggtctggcaatttcccttgtggca
aaagagaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaggggtgttataat
actagactcaaggaggaaggaggttgcaccatatggtacaatgaaatgcagttgctggga
gaaattgaagaacacttaaactgcactatttcccaagtagaaccagacataaaagtacca
gtagatgactttgatgggaaagtcacatatggacagaaaagagccctcggtggtggactt
tataaaggccatgtggatattctggcacctacagttcaagagttggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
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