Coturnix japonica (Japanese quail): 107312253
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Entry
107312253 CDS
T04297
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04512
ECM-receptor interaction
cjo04514
Cell adhesion molecule (CAM) interaction
cjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107312253 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
107312253 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107312253 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107312253 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cjo04090
]
107312253 (SDC1)
00535 Proteoglycans [BR:
cjo00535
]
107312253 (SDC1)
Membrane trafficking [BR:
cjo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
107312253 (SDC1)
CD molecules [BR:
cjo04090
]
Proteins
107312253 (SDC1)
Proteoglycans [BR:
cjo00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
107312253 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
107312253
NCBI-ProteinID:
XP_015714984
UniProt:
A0A8C2TLA7
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All DBs
Position
3
Genome browser
AA seq
311 aa
AA seq
DB search
MWTMLRAVSVLLAALCVHHAVTQTTNLNLPPEDLDSSGDDDDGFSGSGAGPLPDQSLTWR
MPAEPTNSSLLATPVVFNEQLFPGTGSRTEKKITTPPATSRVVTEEPVVAVKDETPLLGS
PDEKPTDDAIVTTTRSPTTRFPSVLHVIPSEAPGTVHELEPKTPGSEMPDTKDVPETNST
THPEGDIAAAPTTAPGDVAPTHEEVSEDGSGDPGDFILVKDEDLVPTQISEVPADSGRNA
KAAGASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGY
QKPHKQEEFYA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgatgctccgcgcggtgtccgtgctgctggcagcgctctgcgtgcaccacgcc
gtcacgcaaactacaaatctgaaccttcctcctgaagatctcgattcttctggtgatgac
gatgatggattctcaggttcaggtgcaggtcccctgcctgatcagtccctcacctggaga
atgccagcagagccgactaattcctctttactggcaacaccagtggttttcaatgaacag
ctgtttcctgggactgggagccgaactgaaaagaagataacaactccacctgcaactagt
cgtgtagtgacagaggagccagtggtagctgtgaaggatgaaacacccttgttgggctca
cctgatgagaaaccaacagacgatgcaattgtaacaacaacaagaagtcccactactcgc
ttcccttcagtgcttcatgtaattccttcggaagccccaggcacagtccatgagctcgaa
cctaaaacacctggctctgagatgccagacactaaagatgtgcctgagaccaactccacc
acccatccggagggggacattgctgctgctcccacaacggctccaggcgatgtagctcct
acacatgaggaggtttctgaagatggctcaggagacccgggagacttcatcttggttaaa
gatgaggatttggtccctacccagatctctgaagtgccggctgactctgggaggaatgcc
aaagcagcgggagcctcgggaattatggacaggaaagaagttcttggaggtgttattgct
ggaggactggtaggcttggtgttcgcagtgtttctagttgcatttatgctgtacagaatg
aagaaaaaagacgaaggaagctattcactggatgaaccgaaacagtctaacggaggatac
caaaaaccacacaaacaagaagagttctatgcataa
DBGET
integrated database retrieval system