KEGG   Coturnix japonica (Japanese quail): 107312473
Entry
107312473         CDS       T04297                                 
Symbol
CDC5L
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107312473 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjo03041]
    107312473 (CDC5L)
   03400 DNA repair and recombination proteins [BR:cjo03400]
    107312473 (CDC5L)
Spliceosome [BR:cjo03041]
 Complex B
  Other components
   Prp19 complex
    107312473 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    107312473 (CDC5L)
DNA repair and recombination proteins [BR:cjo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    107312473 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 107312473
NCBI-ProteinID: XP_015715424
LinkDB
Position
3:99282234..99310012
AA seq 829 aa
MLFQLGSPLDETLCLLSSNLPFCRLSFFITTYIIFCSKDEILKAAVMKYGKNQWSRIASL
LHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCL
EHYEFLLDKAAQRDNEEETADDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARA
RLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFE
KKPAPGFYDTSEENYQILDADFRKLRQQDLDGELRSEREGRERKKDKQHMKRKKESDLPS
AILQTSGVSEFTKKRSKLVLPAPQISDIELEEVVKVGQASEIARQTAEESGITNSASSTL
LSEYSVTNSSIALRTPKTPAAQDRILQVCTESMALTNXDTPLKGGLNTPLHESDFSRGVT
PQRQVVQTPQLPGAFVTHVRTPSQGQEGLTPRGGLTPKPGAGTTPGRTPLRDKLNINPEE
GMADYSDPSYAKQMERESRENLRLGLMALPAPKNDFEIVLPENAEKELEEPEVDEAFVED
TADIEARKQALRDAERAKELKRMHKAVQKNLPRPSEVNETVLRPANVEPPLTDLQRSEEL
IKKEMITMLHFDLLHHPFGEQPTGKKGKGPGFGTNNAEHMAYLEQNPYEKFSKEDLKKAQ
DLLAQEMEVVKQGMGHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANLASKKDRIESLE
KRLEINRGHMTTEAKRAAKMEKKLKILLGGYQSRAMGLIKQLNDLWDQIEQAHLELRTFE
ELKKHEDAAIPRRLECLKEDVQRQQEREKELQQRFADFMLDKETFQSKY
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgctgttccaattgggcagcccattagatgaaaccctttgtcttttgagctcaaacttg
ccattttgccggttgtcattctttataacaacatacattattttttgttcaaaggatgaa
attctgaaagcagctgtgatgaaatatggcaaaaaccagtggtctcgtatcgcttcccta
ctgcatcggaaatcagcaaagcagtgcaaagccagatggtacgaatggttagatccaagc
atcaaaaagacagagtggtcacgagaagaagaagagaagctgctgcacctggccaagcta
atgccaacccagtggagaaccatcgccccgattattgggagaacagctgcgcagtgtttg
gagcactatgaatttctgctggacaaagctgctcagagagacaatgaggaagaaactgct
gatgatccccggaaacttaaacctggagaaattgatccaaatccagaaaccaaacctgcc
aggccagatcctattgatatggatgaagatgaacttgaaatgctgtctgaagctagagct
cgtctggctaatacacagggaaaaaaggcaaaaagaaaagcaagagagaagcagctggaa
gaagctaggcggcttgctgccctccagaaaagacgagaacttcgagctgctgggatagag
atacagaaaaaaaggaaaaagaagaggggcgtggattacaatgcagaaatcccatttgaa
aagaagcctgcacctggtttttatgatacatcagaggaaaactaccagattctggatgca
gatttcagaaagctacgtcagcaagacctggatggagaattaagatctgaaagggaggga
agagagcgcaaaaaggacaaacaacacatgaaacgaaagaaagaatcagacttgccttca
gctattctgcagaccagcggggtgtcagagtttacaaagaaaagaagtaaactagtgctt
ccagcacctcagatatctgatatagaactagaagaagttgttaaagtaggccaggcgagt
gagattgcacgccagactgctgaggaatctggaattacaaactcagcctccagcactctt
ctgtctgaatatagtgtgaccaacagcagcatagccctgaggactcccaaaactccggca
gcgcaagacaggatcctgcaggtatgcacagaatctatggctctcacgaatngtgatacg
ccgctgaaaggagggcttaacacccccctgcatgaaagtgacttctcaaggggggtaacc
ccgcagaggcaggttgttcagactccacaactaccaggtgctttcgtcacacatgtcaga
acaccttctcagggacaggaaggattaactcctcgtggaggactgactcctaaacctggg
gctggtacaactcctggtagaactccactgcgtgataaattgaatatcaacccagaagag
ggaatggctgattacagtgacccatcttatgcaaaacagatggagagagagtctcgtgaa
aacctgcgtctggggctcatggcccttcctgctccgaagaatgactttgagatcgttctg
cctgaaaatgcagaaaaagaacttgaggaacctgaagtagatgaagcctttgtggaagat
actgcagatatagaagcccgcaagcaggctctccgagatgcagagcgagccaaggaactg
aagagaatgcacaaagctgttcagaaaaatctaccaagaccctcagaagttaatgaaaca
gtattgagacccgcgaatgtagagccacctctaacagatttgcagagaagtgaagagcta
ataaagaaagagatgattacaatgcttcactttgatcttttacaccacccatttggagaa
cagcctactggtaagaaggggaaaggcccaggatttggaaccaacaatgcagaacatatg
gcttacttggaacaaaacccttatgagaagttctccaaagaggatctcaagaaggctcag
gatctactggcgcaagagatggaagtggtgaagcaaggaatggggcatggagagctctca
agcgaagcttataaccaggtgtgggaagaatgttacagccaagtgttgtatctgcctgga
cagagccgctacacaagagctaacttggccagcaagaaagacaggatagagtcacttgaa
aagaggcttgagataaacagaggtcatatgacaactgaagcaaagagggctgccaagatg
gagaagaagctaaagattttgcttggcggttatcagtctcgagcaatgggcctcatcaaa
cagctgaatgatttgtgggaccaaatagagcaggcacacctggagctgcgtacttttgag
gagctgaagaaacatgaagatgctgctattccacggagactggagtgtctgaaggaagat
gtgcagcgacagcaggaaagagaaaaggagctccagcagagatttgctgatttcatgttg
gataaagagacttttcaatccaagtattaa

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