Coturnix japonica (Japanese quail): 107312730
Help
Entry
107312730 CDS
T04297
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X2
KO
K16498
protocadherin delta 1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107312730 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjo01009
]
107312730 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjo04515
]
107312730 (PCDH11X)
Protein phosphatases and associated proteins [BR:
cjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107312730 (PCDH11X)
Cell adhesion molecules [BR:
cjo04515
]
Cadherins
Protocadherins
107312730 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Fibulin_C
K319L-like_PKD
TMEM154
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
107312730
NCBI-ProteinID:
XP_015715891
UniProt:
A0A8C2U336
LinkDB
All DBs
Position
4:complement(6365803..6811394)
Genome browser
AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGMNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSIPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKKLFTIDNATGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHSEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPISSSPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFAIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYIQELVRRSMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEMGRPQTPLKESTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPSSGA
STSHPLPLGFPQEEYYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNTTLPSFGFQQSWGRGARSDGRHTLGRPLPKDDTDKGQGGPRP
QFYNSCERHCTSEDPVKVIPLANFAMSHQAAVSGNSTTFIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattagcctgtattgtatttcag
tctggagcacaggagaagaactatacagtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatttgctcaaggatcttaatttaacactggatccagatgtccccctttcctcgcca
ctacagttcaagcttgtatataagactggggatgtaccactagtacgagtggaagagaac
actggggagatatttacaactgcaaaccgcatagaccgagagaagctgtgctctggcatc
tttagtgagaatcgctgcttttatgaggtggaggtggccgttttgcctgatgaagttttc
agactggtcaagatcagattcctaatagaggatataaatgacaatgcccccctcttccct
tctacagttattaacatctctatccctgaaaacacagcaattaattctcgctattctgtt
ccatctgccattgatccagacattggtatgaatggtattcaacattatgaactccttaag
cccaaaacagctccgaaaaggacatttggatcgattacaaatgatcagggtcagaatgta
tttggtcttgatataattgagacacctgagggagataagtggcctcaactgattgtccag
cagatcctggatagagagcagaaggatacctatgtgatgaaaattaaagttgaagatggc
ggaagtcctccaagatctagcactgcaatcctgcaagtcacagtgactgatgtgaatgat
aatcgcccagtctttaaagagaatgacattgaagttagtattccagaaaatgctccagtg
ggcacctctgtttctcagcttcatgccactgatgcagacctgggctcaaatgcgcaaatc
cacttctatttcagcaatcaaatctccagtttggccaaaaagctgttcaccattgataat
gccactggtctcatcaccataagagagccactagacagagaagaatctcctgtacacaaa
ttaactgttttggcaagtgatggcagttcaactccatcaagagcaacagtgactgtaaat
gtcacagatattaatgacaatgtcccatcaatagatacaaggtacatcatcaatccagtg
aatgggacagtgcttttgtctgagaaagctccccttaatacaaaaattgcattgataaca
gtaatggacaaggatgctgatctgaatggaaaagttacttgttttacagatcatgatgtc
ccttttagactaaagccagtgtttgataatcagtttcttctggagacagctacatttcta
gattatgaatccacacgggaatatgctattaaaatagtagcttcagattcaggtaaacct
cctttaaaccaatctgcaatgctcttgatcaaaattaaagatgaaaacgacaatgcccca
gttttcacacagcctatcataggtctttccatccctgaaaacaatgctcctggtactcag
ctaaccaagataagtgctacagatgctgacagtgggcgcaatgctgagatcagttatatt
ctgggttctgatgcaccccctattttcaaccttgaccgccgtacaggcattctgacagca
gtgagaaagctggacagagaaaaacaagataggtactccttcactgtactggctaaggat
aatgggatgccacccttgcagaccaacgctactgtgacagtgtcagtcctggaccagaat
gataacagccctgctttcacacacagtgaatataatttctatgttccagaaaacttaccc
atgtatggcacagttgggcttatcacagtaacagatgctgattctggagagaatgctgca
gtcactctgtctatattaaatggtcgagataatttcattattgatccacttactggtgta
ataagacctaatattacttttgatagagaacagcaggggtcatacactttccaggtgaaa
gcggtggatggaggaagactgcagcgttcctcaacggccaaagtgacgatcaatgttgtt
gatgtaaatgacaacaggcctgtttttgttattccttcatcaaattattcctatgagttg
gttccaatatcatccagtccagggtctgttgttactaaagtctttgcagttgataatgac
acaggaatgaatgcagagctccgttacagcattataggagggaattcaaggggcttgttt
gcaattgaccaattaacaggcaatattacattgaaagagaaagtaattacatcagatcat
ggcttgcacagactggtgataaaagtcaatgacttagggcagccagagtctctttatact
atagctcttgtgcatttgtttgtgaatgagacagtcaccaatagttcctacatacaagag
ctagtgcgcaggagtatggaaactccagttggccagaacattggggatggtgagataacc
ccacaaacgaatgattatgtcaagatcataattgcaattattgcaggcacaatgacagtt
attctggtaatttttgttactgctttagtacggtgccgccagactcccaggcataaagtt
gtccagaaaaataagcagagtggtgagtgggtttccccaaaccaagagaataggcagatc
aagaagaagaagaagaagaagaaacgctctccaaaaagtcttcttctcaactttgtgact
attgaagaatctaagcctgatgatcctggccatgagcacataaatggcactttagacatt
cctgtagaactagaagaacagactatgggaaaatataactgggcaactacaccaaccact
tttaagcctgatagcccagatttagcaaagcactacaagtctgcttctccacagccaacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaactg
cctctggataacacctttgtagtgggctgtgactcactctccaagtgctcatcaagcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
attcacaccagacagcacacaaaagaaatgggaaggccacaaactcctctaaaagaatca
acgctggagccatggactcagccacagcctcagcgccgtgtcacgtttcacctaccagat
ggctcccaggaaagctgcagtgacagtggacttggagaccacgagcccagcagtggtgcc
agcacatcacacccgctgcccctcggcttccctcaagaggagtactacgagcaagcatca
cccaacagccggacggaaggagatggaaactcagaccccgagtccactatcgaagtcaat
ctccagaaagcactggctgaggcctctgaaacctgcacgcaggagtgtctcatcctgggc
cactctgacaactgctggatgccaccttctttgacacagtatcaacaatccaacacaact
ttgccatcatttggcttccagcaaagctggggccgaggagccagatctgacggacggcac
actcttgggaggccccttccaaaggatgacactgacaaaggccaaggtgggcccaggcca
cagttctacaacagctgtgagagacactgcaccagtgaagatcctgtcaaagtcatccct
ctggcaaactttgccatgtcccaccaggcagcggtgtctgggaatagcactacgtttatc
catgagcaccagctataa
DBGET
integrated database retrieval system
